5a98fc9e383540a12c9d3a38ad35fbed *DESCRIPTION
4d26c11e64de6411ccace4ad03fb308c *NAMESPACE
2685a7b0fd394e6e62abda7c74a26adb *NEWS
2673d29d305226ced06ad55114866a81 *R/bm.r
f88b441b130f0f1fbff1f484d99095da *R/bm_as_bm.r
1648306d7f689ec5e900c9b1e074cf06 *R/bm_bind.r
f7c1d47b6d8c89595b0440e87eb56859 *R/bm_files.r
e2f4ffd7f11353de447d9db2b18dc10c *R/bm_genomic_sex.r
24e0452525c197eaa314593f03fd1e86 *R/bm_grm.r
406cc5a03cb4298b8350b8ca7e57e3df *R/bm_interface.r
e1c8b060f7d6fe0e44d079caa3aa57b9 *R/bm_ld.r
a6b5975ed8b585e1870b9e648d130b0d *R/bm_ld_thinner.r
68dc3f2191ef2106296bbe18719064d0 *R/bm_product.r
e143e834d4eb4ac634e2def018380cfa *R/bm_select.r
460ffdd4ddff4755f1ad4b1292446985 *R/bm_stats.r
abbafb7f87940105b208fda196976894 *R/bm_subsetting.r
7e6cebfc27b53d4529a865fbd1e15dea *R/gwas.r
0512ed98107b5664b2513f1b1b0a018a *R/lik_contour.r
60cfa1a42913e14722244c48671abc7c *R/lmm_aireml.r
7a493ecc44748940c91d7d9b84c84313 *R/lmm_diago.r
d0f2e9385e6cd3fd51e418b9082d2b0b *R/lmm_simu.r
42a9818d149f496c25b14ddcf29e30c5 *R/logistic_mm_aireml.r
6dbddbe2a33bcb1ed29d27969f5124f1 *R/random_pm.r
83fdc802142ebbd86a3b37d0f1a77bb6 *R/score.r
62c2a3d546c9f8afcbb25d465c5729c6 *TODO
57a4709b04af572b2aa247788f858b75 *build/vignette.rds
3596d85a370f43e3e00ac131fbbbf95c *data/AGT.rda
34e12c308b68ce8e6ffaf071af82af7c *data/LCT.rda
28e30890deb426c070776d01a1320d49 *data/TTN.rda
abf8652f46e0022f2cd2b5ff8efd424c *data/datalist
63ba504d97a74c81cd9666f5d1ed9c69 *inst/doc/gaston.R
303402f61e2d998bb2918678feed3e75 *inst/doc/gaston.Rnw
05715654c04e23fae609e1f1b2e93941 *inst/doc/gaston.pdf
12c31f58f990024d8b77c3b0c9dc86cc *inst/extdata/LCT.bed
2273b75e59551e464ae55f404d2887ac *inst/extdata/LCT.bim
3b1a418c594a35920264a5743580180f *inst/extdata/LCT.fam
91e0aa603c29eb463fe6dbefd9383834 *inst/extdata/LCT.rds
7f7054271ecd200b44f12eb8972c96cb *inst/extdata/LCT.vcf.gz
3ade457b2b3cdef6faaa05968fc49d42 *inst/extdata/LCT.vcf.gz.tbi
80c6a9e575bb3038aafd512a85290e08 *inst/extdata/chr2.bed
97078f282b05f0a6ae30948bcece2470 *inst/extdata/chr2.rds
1d858fed609a26fe339055ff358cdcfe *man/AGT.Rd
e75617ec21d0d4a7f790166845285b25 *man/GRM.Rd
049f2b70cda2830f67e4d3440b0ce5fb *man/LCT.Rd
9fc1f5757dcbe2078ec757dd0a529663 *man/LD.Rd
c5cc5de598ab4074a341fb7c59ff3d4f *man/LD.thin.Rd
9840358e0ade1e6ac512ed1377c8c77b *man/TTN.Rd
00d8064525f1cc07a3d1ce6fd4e73b86 *man/as.bed.matrix.Rd
a4c5f4cb4242a2abef7e0e1580f53a77 *man/association.test.Rd
b8b95a75ddfdae381405166a843d647a *man/bed.loadings.Rd
f49c3589a104631d3de5297cac8f621d *man/bed.matrix-class.Rd
f3a481f9b037894d68f166dda2e17b0d *man/gaston-package.Rd
cb91f55c7b6c8f11b4b43d7d239a494a *man/lik.contour.Rd
b32618d2d9607956ffaf69e94462006b *man/lmm.aireml.Rd
811802e52c9211190b823cc463212526 *man/lmm.diago.Rd
748264a1863d7d3208c0bf9ee8819ecb *man/lmm.diago.likelihood.Rd
e487ee7c96b2f9352bd9bab0527bb1a3 *man/lmm.simu.Rd
5062450a5a28428be1442a3bc2f934b4 *man/logistic.mm.aireml.Rd
04601d6eb9adc1d9e4c8470f0d3460e8 *man/random.pm.Rd
f0d0206d9f9b1c79ed5c5fce78c6c73c *man/read.bed.matrix.Rd
e9473e30c2ff59b0a7e799c1d80d9d7f *man/read.vcf.Rd
0abcea9ecf5eb5225f5e3d20bbc2f3fe *man/reshape.GRM.Rd
6a15a1682c303fb5083ce37dac0b5846 *man/score.fixed.Rd
22eb849ea84c3867d5c0d0920a2466f0 *man/score.variance.Rd
1501bf420da0194a1d640cdace1835e8 *man/select.inds.Rd
ad9ae02a962b7fc7b99aefaad89e58ff *man/select.snps.Rd
4ee4a973ee5f8a30dfac0bbf2a0383e7 *man/set.genomic.sex.Rd
04e56259460f38115dbb343f622380ad *man/set.hwe.Rd
aef9695f918648b11b9e6f5f2e59fd8d *man/set.stats.Rd
58bf377417a40c542664e8de3a560a21 *man/write.bed.matrix.Rd
04d7a7e655a3417a30c8c5e22f10dc6c *src/ai-reml-1k-covar.h
c62f3cdb255c2a02a108a3205dbf445f *src/ai-reml-1k.h
cc16a301e9f3dc7683275523e0014356 *src/ai-reml-logit-1k-covar.h
a839eff63039d1627799470495015f43 *src/ai-reml-logit-1k.h
b80ab6df2484794d3fe48747c22fb037 *src/ai-reml-logit-nk-covar.h
857a827f0639a5aee7be30fd68f32981 *src/ai-reml-logit-nk.h
71bb645770c1c002ec8595422d073545 *src/ai-reml-nk-covar.h
6ff1e50646f6573f6a8de97786526d40 *src/ai-reml-nk.h
7e9308cba5444ffe528eecc70d689fb2 *src/any.h
24e963cbfab0941df5c412eb869a8865 *src/diago.h
bfb56da90ddb5a3773999eadbe0d34fd *src/diago_full.h
84ed11091277d557ae4ffa9eef95c3f4 *src/diago_full_nocovar.h
80a54435f25c29a47241733325a98ad2 *src/diago_nocovar.h
90252caad2215944096d77247aba815b *src/diago_wrapers.cpp
e64c89cb02ab43f8d95730c3f98bc79a *src/diago_wrapers.h
0e62f29818cd0de6db499adf432c9574 *src/export-aireml-1k.cpp
16eda4e91765e9fbc2d50d608798d953 *src/export-aireml-logit-1k.cpp
953b74db74a93a311eb7076441d170bf *src/export-aireml-logit-nk.cpp
4a207bb541281d771203daa64f2bb2f9 *src/export-aireml-nk.cpp
88c2fb722f4f77ab2da712f9245e7791 *src/gwas_lmm_diago_lrt.cpp
72d63b3195fcbb149e2f89c0722bb58f *src/gwas_lmm_diago_lrt_mt.cpp
56ef3e9e825dd96996c801ba9dc89ceb *src/gwas_lmm_diago_wald.cpp
68e1947941b041d240a89b8350cb6cc7 *src/gwas_lmm_diago_wald_mt.cpp
ec7b3eaafc29ee074c212afcb3049b0f *src/gwas_lmm_score.cpp
599456c13a04482724b77500c2085e67 *src/hwe.cpp
eae04c0f6a28040448ae30dcab55af52 *src/hwe_chi.cpp
2b39e959a989f84c56318ba1897b7229 *src/isnullptr.cpp
ffdad0b18533e596034a4c8345f3a474 *src/lmm_diago.cpp
811d592e71dfdabafabecb76a14e4b1a *src/lmm_diago_full.cpp
fa9c3e84bdba664ee156a637efddb6a9 *src/lmm_diago_nocovar.cpp
e085288dc7c7b0f0f9621658a441ba99 *src/loubar.cpp
f4c8c19e8744439274e95e55a58a7168 *src/loubar.h
2b86accabb535321b0d2190ce64ebf3d *src/m4_bed.cpp
2a1ebebff3cc5202e7653f0ea6d23d49 *src/m4_bind_inds.cpp
ca518453f7274adfe90446df16a6be01 *src/m4_bind_snps.cpp
79b271d525ceb558eb1cd23714a189a6 *src/m4_conversion.cpp
26132f31bc8a5ac45df90f06a97f2598 *src/m4_dims.cpp
66e5154e20098e447f1eecbea3d006a9 *src/m4_exports.cpp
360e4a8d0d538fc098e75f86f3e31215 *src/m4_extractind.cpp
0580d39e033d34b6cf0be91cb6d14c53 *src/m4_extractsnp.cpp
e224baa334ba64845bf2b8c294338e2c *src/m4_kinship.cpp
b5a992b797fab6ba7d2cdd1259b0bbb8 *src/m4_kinship_p.cpp
e97ca4a5e03feb338b8bd9de381ed698 *src/m4_kinship_type.h
d59ca25223bf6ac4ff1a656650d929c1 *src/m4_ld.cpp
c16acf43153a95c43c0fae22bceaf743 *src/m4_ld.h
993dc08d8fa6735d5ee802e3b70dd2ea *src/m4_ldp.cpp
9db484af411ba877008fe07a2e09794b *src/m4_ldthin_left.cpp
fff0220fed4f5ff2ee8f21de2a3161f6 *src/m4_ldthin_random.cpp
29eacd21b1bb83556027ef1df986dc11 *src/m4_ldthin_right.cpp
c580bcc45cae89d59c462cb0c1e6b4e0 *src/m4_prod2_ms.cpp
53a49d588502a546b7cb78d555252810 *src/m4_prod2_p.cpp
11b9b5a4d0de9a0287539df71046dac5 *src/m4_prod_ms.cpp
3a957fa4e9a9f9386f3b2e261f87e47e *src/m4_prod_p.cpp
5a028be48d2a6b7fb5f6a663d0eb4413 *src/m4_read_vcf.cpp
4fb2e5bcc2c65236b58a77b64a8d31b7 *src/m4_stats.cpp
5dac904d5ac666a2279ac48d5aa31a9f *src/m4_transpose.cpp
ccab8c57f41ddaf1031a1336c3552319 *src/matrix-varia.cpp
16a2354bdbc53c5cb097441e152a56c2 *src/matrix-varia.h
a0c992bc845b06e8cb9ecd588fa02bec *src/matrix4.cpp
c65980d11c91d82039629e9de907555f *src/matrix4.h
769947a5866968d0e172a4a3f94d93e7 *src/optimize.cpp
286b84892034eb44b0bb5f0f2a2de4c6 *src/optimize.h
e6092bb5851fb0917c0c2f94bbe00e99 *vignettes/gaston-015.pdf
4ea89399fff71fced94011d820f0afbe *vignettes/gaston-026.pdf
fe80636c8fffeb110e58bef771592b26 *vignettes/gaston-028.pdf
68f7ee66a2361c2fa09caa50c15b32d7 *vignettes/gaston-030.pdf
e8509d18c3e74f4ef2253865beca3d9e *vignettes/gaston-032.pdf
48543d5b0b68a5dfe4b2e73bc842325a *vignettes/gaston-037.pdf
04644942ad45917637694f1f5f2a4f65 *vignettes/gaston-039.pdf
8665ec9aee3a714469b63329c1846463 *vignettes/gaston-041.pdf
8a799677ef3a1329df75aa8982608fba *vignettes/gaston-043.pdf
7fa0a80b979fd6546f54ce9e37b62b32 *vignettes/gaston-045.pdf
82166c8a42f7726a7c7ada8cb8f56821 *vignettes/gaston-047.pdf
2420047e2dcdc19f295c21014fde19f4 *vignettes/gaston-051.pdf
d6309d883f9f249f211a4845935da9d3 *vignettes/gaston-052.pdf
00445433e0e8dea141ff2384695850fb *vignettes/gaston-053.pdf
7e10d58c13b3c5acd665fcef0c2fa39f *vignettes/gaston.Rnw
