Package: hlaR
Type: Package
Title: Tools for HLA Data
Version: 0.1.2
Description: A streamlined tool for eplet analysis of donor and recipient HLA (human leukocyte antigen) mismatch. Messy, low-resolution HLA typing data is cleaned, and imputed to high-resolution using the NMDP (National Marrow Donor Program) haplotype reference database <https://haplostats.org/haplostats>. High resolution data is analyzed for overall or single antigen eplet mismatch using a reference table (currently supporting 'HLAMatchMaker' <http://www.epitopes.net> versions 2 and 3). Data can enter or exit the workflow at different points depending on the user's aims and initial data quality.
Authors@R: c(person("Joan","Zhang",email = "joan.zhang@emory.edu", role = c("aut", "cre")),
             person("Aileen","Johnson",email = "aileen.johnson@emory.edu ", role = c("aut")),
             person("Christian P","Larsen",email = "clarsen@emory.edu", role = c("cph", "aut")))
Depends: R (>= 3.5.0)
License: MIT + file LICENSE
Encoding: UTF-8
RoxygenNote: 7.1.2
Suggests: knitr, rmarkdown
VignetteBuilder: knitr
Imports: devtools, usethis, tidyverse, dplyr, reshape2, schoolmath,
        tibble, stringr, purrr, tidyr, utils, readr, here, readxlsb
NeedsCompilation: no
Packaged: 2022-02-01 16:37:26 UTC; xzhan50
Author: Joan Zhang [aut, cre],
  Aileen Johnson [aut],
  Christian P Larsen [cph, aut]
Maintainer: Joan Zhang <joan.zhang@emory.edu>
Repository: CRAN
Date/Publication: 2022-02-01 17:00:02 UTC
