2e5b726f280690ac96aa8279ec72c848 *ChangeLog
c0452c1a13f99a7094cae41cb565396a *DESCRIPTION
74a1d85762f3e5652e8b500f4a1edf1b *NAMESPACE
a4eb6f49ba1ee9e3529cf77143fa7ad4 *R/AllClass.R
c1eda7d4300d934fccc1271aba17f3a1 *R/AllGeneric.R
1e7b92f8de2a1188c3fa118c94fbc548 *R/GHrule.R
207241d5c0754b0a72efe212dab70c1b *R/bootMer.R
c349c1f9080574d77f36f2b16c7e342e *R/checkConv.R
8f986a71400c586e9bf7c02dd1093a35 *R/deriv.R
b4f5a33cf89becae0393c667fb0317b9 *R/hooks.R
44cf7d0222742b1401c1fd9675d7c897 *R/lmList.R
64807e93bf83e9fdcfbb43009fcd179e *R/lmer.R
775978845374cd9f493154ddf9b7db48 *R/lmerControl.R
4bde5438bd9ddba5d3cd26e5a43a494b *R/mcmcsamp.R
584fd4f0d61272e9ec2091a8a20a7c68 *R/modular.R
67ac50226a222f22e272a0845f73bdab *R/nbinom.R
89be54f6700b0d9dfbd5b5c28dbc6282 *R/optimizer.R
d75b6a3c935189827471c01a6bac2a14 *R/plot.R
5884740ee6aeced84bf180c585c13414 *R/predict.R
7b6ce2e33171bfd6244132362af0d294 *R/profile.R
02ea75a63f3728709a68a702801ac6d3 *R/sparsegrid.R
e057bf248efa620aa2c5c7ad122cd98d *R/sysdata.rda
6e4b6cf33ddc35be222b191d24cf6ead *R/utilities.R
ca217187200eb85c6e7ff5bac37a383a *R/vcconv.R
b4a18df55812c43d0230a7faf2abf1a0 *build/vignette.rds
99c921d83f9ba51e1653a5275fa8760c *configure.ac
7b16a3ab29bb34e105b8edd5333ae95d *data/Arabidopsis.rda
8cf70603a6660d10c170d9e7159c2951 *data/Dyestuff.rda
2f1c751f7de40daa241601f64726c9e0 *data/Dyestuff2.rda
5d257c44f24c98310fbb2e9f85e3e396 *data/InstEval.rda
b61a31e7665881741ebd2f88acc98891 *data/Pastes.rda
bfd53f3fec03c93b634a4250d03c17a1 *data/Penicillin.rda
a545020034749ad9c56e4510fdba6dc1 *data/VerbAgg.rda
c80348b333f026d7fe927398894c6f34 *data/cake.rda
09bbd2170531a7256a2cf743f4bec399 *data/cbpp.rda
28d1ffd0a450108d274431f7335e859d *data/grouseticks.rda
3eb17ae1551f7a264c4214460041908c *data/sleepstudy.rda
8c81a4cdd4cd634e4102999545422b7e *inst/CITATION
f5b3608b6e8ba93effb6d06be21939d0 *inst/NEWS.Rd
a1f824867c6c98ebe87a82f8ce95e3f6 *inst/doc/Doxyfile
1c23d9a9bef304ce6858c60b3571b7f0 *inst/doc/PLSvGLS.pdf
1ef80fb6386a7c378a4981a727a821a0 *inst/doc/Theory.pdf
951ba1cb5b29901a5eb2dd1376916af8 *inst/doc/lme4-extras.pdf
64596b6614cd0b40b833a4c88c75d273 *inst/doc/lmer.pdf
194d0d9d361fa6c9ebd46b66f393caf7 *inst/doc/lmerperf.html
9b03c01f1b80eb945edbbaf7ee658049 *inst/doc/profiling.txt
b63ce45d087ac1ac15e011620990b796 *inst/testdata/Johnson.rda
0ad4852aad9639f10ad13606ecf09908 *inst/testdata/SO_sep25.RData
56173e2cb895c04358bf1bf81bab1495 *inst/testdata/Thailand.rda
6dd6554b65cb2bfeb420364b1641a6f3 *inst/testdata/badhess.RData
aedcb80c37b6d01f4db5bd076ebc3298 *inst/testdata/badprof.rds
da186eafec8322a55ec78451e19fd01a *inst/testdata/boo01L.RData
b4b99dec3880c755f42a8dc9e77a067b *inst/testdata/colonizer_rand.rda
46c36252a311ba97a3413f84a3633d41 *inst/testdata/confint_ex.rda
5f381198d17abbc54763cb7afe2608f8 *inst/testdata/crabs_randdata00.Rda
693aae2f30886fa217ca1b82b0ed43bb *inst/testdata/crabs_randdata2.Rda
038cc2f0fce197eb134607eee63fe83c *inst/testdata/culcita_dat.RData
ec60161c46be3b6dbb2840490204eb79 *inst/testdata/dat20101314.csv
2c5596646060c432ca9e53cb5b61e307 *inst/testdata/dataEx_Glmer.txt
c340d92f256024616f2aaf56b3460c23 *inst/testdata/fakesim.RData
db58d90a120922be1d62a9252b8f1e2d *inst/testdata/gopherdat2.RData
8fb10b3889a527fbb661415f7cbb8e11 *inst/testdata/gotway_hessianfly.rda
eeae66bdabc2c1af320e278718105a29 *inst/testdata/hotpower.csv
cf78ea240b9aa971169ec4e513b328f7 *inst/testdata/koller-data.R
3c2cc3a4fb4ee6f33cb4b8f9f84270f3 *inst/testdata/lme-tst-fits.R
263f9b256e2e469441a003ea4b824477 *inst/testdata/lme-tst-fits.rda
9d1b48829bb0a9fbc76e410c111b27ab *inst/testdata/lme-tst-funs.R
3dffc4c30b964f86f938b6d8c656d13d *inst/testdata/mastitis.rda
3313df191ef524ea5b887dcb54b3f153 *inst/testdata/polytom2.RData
fd199a7fcece25952b873986d3ac0b1a *inst/testdata/polytom3.RData
10d8d2dab0664031ff18831a9213d1f3 *inst/testdata/polytomous_test.RData
36f44d658986561eee513a4a2789afe7 *inst/testdata/polytomous_vcov_ex.RData
c3a152c99372c2097426afb07adea841 *inst/testdata/prLogistic.RData
402feea181e789a9b24bd0df88b73717 *inst/testdata/radinger_dat.RData
0de901759722680f5c73ed77a6f6aae2 *inst/testdata/rankMatrix.rds
e7fc63ccb18cc703074586afaa6cb4a6 *inst/testdata/respiratory.RData
f3e1a564e23849bf8db38440b543c944 *inst/testdata/sbTobb.Rdata
7c4e1116306646d99c9ef1a20c98afa7 *inst/testdata/survdat_reduced.Rda
dca0ccff30089606e068a486f5b51d67 *inst/testdata/tprfm1.RData
0eec27a5b9eab6d5b3d190cd37ec6634 *inst/testdata/trees513.R
145eb2c3cf4bac44b217618a0525e0e4 *inst/testdata/trees513.RData
bc1f558b8e0ff314bb32307dcf23ff38 *inst/utils/allFit.R
41342f863dd82ad262430ca789d8b67b *inst/vignettedata/calcium.txt
11b358c21533a48fc03e52e9723bb165 *inst/vignettedata/mcmcsampdat.RData
24ac44df1d4ad24ebfbbbd0918ea6bd2 *man/Arabidopsis.Rd
e763b611e70a7697cb6fe31b0561aaac *man/Dyestuff.Rd
987c24df74a697fed074daa9a62017ea *man/GHrule.Rd
63bcaefc2718a7d338bf093d44f6ac5b *man/GQdk.Rd
fd5213a08fc8fece4d1afadb4c5155bf *man/InstEval.Rd
cf808076a7e869c084680fdcb2f44777 *man/NelderMead-class.Rd
ad16fef8b8dc2ac1d116bee141e48baa *man/Nelder_Mead.Rd
a6d10b8014d2887c25df3954aab76cb2 *man/Pastes.Rd
2dfbaad44da43caaf910a65a19ecb2f7 *man/Penicillin.Rd
e85ea18953bcdb731d8fa4c060d7889f *man/VarCorr.Rd
041c90508c36866544fec23b39ba1c25 *man/VerbAgg.Rd
f43c230e226dec04a9b2460856865233 *man/bootMer.Rd
f6191a9e9dbe98f609eeb90f8ca19133 *man/cake.Rd
fd93f2971f3ebf948961188570e94b82 *man/cbpp.Rd
e187936bd4ad87c41d8e7a51421f77d0 *man/checkConv.Rd
ac55607877b4ebb9d4db6ae30a6e9fa0 *man/confint.merMod.Rd
a354550440181ace499e4bc09f16bb67 *man/convergence.Rd
08522dd3a52eb723bb0520cc3ad66879 *man/devcomp.Rd
4387831c1db6d08a62c36ccf6b058732 *man/drop1.merMod.Rd
0ffadf84fce25e56463e86ccf165e04b *man/dummy.Rd
c3409c0a52196a11daf3ecde616d3076 *man/expandDoubleVerts.Rd
20e78573b5222c04c999b4abd03f04a2 *man/factorize.Rd
f699fae826b328940860943c133ac02e *man/findbars.Rd
b6f832b80984b12fe181c79428184895 *man/fixef.Rd
b6277de71fa73cdaa9b9259389971d18 *man/fortify.Rd
7027a0d2904e83bc59511d3e104b4028 *man/getME.Rd
c0c66bc34fc7cd0b242d62901a9d4cb8 *man/glmFamily-class.Rd
b595fec321f7ca73ed88b843126baeef *man/glmFamily.Rd
669cd1980469e8b15c8001eb3e1f4b9d *man/glmer.Rd
6158cc1bdc8a47f824eb26b6507cb73a *man/glmer.nb.Rd
36383a0393e3f8f285f7c1d3fe04160b *man/glmerLaplaceHandle.Rd
dc26eb9f86b5056b90e2e90d531490c1 *man/golden-class.Rd
44bb2d1bc6568facec7c4f3d0c0f2cf8 *man/grouseticks.Rd
c4236aab077a04046402a23b86635a7b *man/hatvalues.merMod.Rd
3af905a45dfae46c1eda3ac1be6dd36c *man/isNested.Rd
e10407c28ced55696cb726daac2d9c05 *man/isREML.Rd
bfd54ac3eb3e77ee204865f2c821a080 *man/lmList.Rd
e4faeace55fd64773ae425a8d0f72713 *man/lmList4-class.Rd
7d8ebc023d6f58fd43e3a35047240342 *man/lmResp-class.Rd
83c485d70631b2f161fbd85e32b47f0b *man/lmResp.Rd
5be68d6000e53966c5c7fbb470609929 *man/lme4-package.Rd
e589b21435841a7bc0228ad236457287 *man/lmer.Rd
812a02fa0b95badbbc0b9f61374bd91c *man/lmerControl.Rd
24af6080141cdcc1fbd512f8d8ac698b *man/merMod-class.Rd
67daa8376c15b9f3eebf77f83cd5b6c7 *man/merPredD-class.Rd
2c4a82fb8f0e4d1d3a5f754c242ccee5 *man/merPredD.Rd
09352c1fb6121b13186be99c445751a0 *man/mkMerMod.Rd
32da82272a1fd9350e55ab9b03ea7176 *man/mkReTrms.Rd
0b8a7c8eb451e46d3c2f589fe257faab *man/mkRespMod.Rd
97cd5db2899f0c8587e1205df415cd21 *man/mkSimulationTemplate.Rd
c061c134315aa205c8f412e3114e6617 *man/mkVarCorr.Rd
1b9bc63d326d7d63a06eedb9eb6f0db5 *man/mkdevfun.Rd
cda05ef2a5c1b98c13ca5d8ef8c36e60 *man/modular.Rd
b6a57f539f0628c52c83ec28a3a1e1c2 *man/ngrps.Rd
b31bc40c7d30f7c7661f74f4ae6529b4 *man/nlformula.Rd
cfada68693ff7aad32d78fb0fe1a8b73 *man/nlmer.Rd
3b07b36b150bb8866265fc4679853199 *man/nloptwrap.Rd
f6ab89312ba0f6e6312c4ad7a2a91eaf *man/nobars.Rd
ef41b5f2af605442670566f939198ca3 *man/plot.lmList4.Rd
61ca3a7f7cd9db61e7103ad1277b1a70 *man/plot.merMod.Rd
11b654a48989c25ab82fc6b4b1f8ef10 *man/plots.thpr.Rd
a31992c1b539a32edd5f8521b392fbc7 *man/predict.merMod.Rd
1e64d6fccee6041f67cab27a1d298115 *man/profile-methods.Rd
ad10cf16d136949b84e376ed44ca500c *man/pvalues.Rd
ecc8db3c550d86f05be903f90628ddb9 *man/ranef.Rd
f1619455da67c1fe4ebb48da69d41663 *man/rePos-class.Rd
24efcd0c579045d6aa2b74818a3b3e62 *man/rePos.Rd
697f0b058c10a638815ceb30df916ace *man/refit.Rd
fc1dffbf663939a2c12d6a64ab2488a1 *man/refitML.Rd
3ff721cd182a7592f8b0d0488a4934e7 *man/residuals.merMod.Rd
a124183851ef5f2b787f310dcd53436e *man/sigma.Rd
1dbaacaca6e14894c0b7596773904554 *man/simulate.merMod.Rd
07b9b7279df8bb4ceeab7b390b4213c4 *man/sleepstudy.Rd
74597be45b8bc7612dfd345902340bfb *man/subbars.Rd
a000d83fa06dd8e6c7cb84bb85f6547b *man/troubleshooting.Rd
b95649b75f1080be8b0ee2d6595f68f7 *man/utilities.Rd
3565765b67b88fddd3df9f82fd82738e *man/vcconv.Rd
d36ee08626d65f230c54f0e26fe19284 *src/Makevars
dd39e551a6353a3d564946b1c16f4a30 *src/Makevars.win
9bd1951278e00d4fb2a9e81300852887 *src/external.cpp
26e74552139cf5b0de9f68ec684940f8 *src/glmFamily.cpp
6027ff22b894dd243e340df60d81697b *src/glmFamily.h
28c0ed510b4951b0ffa89b585bc64ed4 *src/lme4CholmodDecomposition.h
78075932275d5a857b092e28c8668b4c *src/mcmcsamp.cpp
5c02521483528cbb35178a0f3f85083b *src/mcmcsamp.h
33f4e86386b6d0ef3203723dc386936c *src/optimizer.cpp
29850b3641eac6107984b62a129f3560 *src/optimizer.h
c289292672b61aa7750f7045d9a89b5f *src/predModule.cpp
ea6f1cedc772f97404ec4062ae5cccbc *src/predModule.h
ebdb119ed2ac5bfcf80dc1bd3b7f6ad6 *src/respModule.cpp
71b9ad20b908d42d0598492b5d01e5f6 *src/respModule.h
2ac4d7d0a908418413b62f6f64d5e131 *tests/AAAtest-all.R
b7b5555161131a54ac0acafe59f4af68 *tests/HSAURtrees.R
a810120b26ea54a7c44ec24aa9f441f5 *tests/README
1d6971e7df776d4ffffa929560abf419 *tests/REMLdev.R
1d7c93d885154b156d3a387f1735e080 *tests/ST.R
827f86bbd0ee89ab5e39a2cb03920533 *tests/agridat_gotway.R
75f09bf23e2ae1a3f09aa6a01631eeb0 *tests/bootMer.R
dfef51deaa7d49b4dd29b3c46b869b02 *tests/boundary.R
827076d9e188c9cd0bfce43a42493081 *tests/condVar.R
c6edf910eef9140bd26c1b213d39959e *tests/confint.R
0238f696e95d45fca38bdc8ea3d86564 *tests/devCritFun.R
7f9a174b13b1610ea46b124efa3f6a57 *tests/devfunQ.R
b5447f6fa0172e401000848fd35d7bb0 *tests/drop.R
4305ef734802c739269b8dca4a050798 *tests/drop1contrasts.R
6d3709bac2db9daf69e1e29aa3d2d273 *tests/dynload.R
0919382566325faa58949b57bbc1a00e *tests/elston.R
286c0e44b4263fe213a7d1df43bf49dd *tests/evalCall.R
65c300f2156a21d8492b0a050800057f *tests/extras.R
39ef0a3821bd138f881e1edb6c38a0ba *tests/falsezero_dorie.R
099dc03c7490ef92e6343fa4892fd289 *tests/fewlevels.R
897cfd778c8d948f842d6fbca0ec9624 *tests/getME.R
cec2ff7851b2e2c430c5d9c643be0396 *tests/glmer-1.R
3a32381a5397cb2df8130d18665c3e65 *tests/glmerControlPass.R
03e7594ca74c8566534bc412e05b1ac5 *tests/glmerWarn.R
433e291d067633d12d20fccafb969b40 *tests/glmmExt.R
043f79ace204c4a59e19352dfcdd156a *tests/glmmWeights.R
26ec7a0086bdb879cad3a9f49b639fea *tests/hatvalues.R
51d9a3dbdcece6163e76fb867fce6ec4 *tests/is.R
f8192b248ea60347bf973eaf527d4830 *tests/lmList-tst.R
0294c12565b3fc2f4cccbcf2f9940e63 *tests/lme-tst-fits.rda
c322d71ff1cb5aae7f7752259339781d *tests/lme4_nlme.R
0796e3c062c28b5aa160f36e9de767ab *tests/lmer-0.R
ca2960464be128aff343ea67d70aaf31 *tests/lmer-1.R
712f7a8e6a2ee83cc5626abfb582d69f *tests/lmer-1.Rout.save
fbbb7928be0ab18e78d03fa3d4b236e3 *tests/lmer-conv.R
3626933bc63874cc482b23542cfb1325 *tests/lmer2_ex.R
aa49ffccf53fc8b93deb61e42d546822 *tests/methods.R
4e30d737875ce21593cc4ddfb24a4311 *tests/minval.R
96ca4f4b592712ec3510bc4028a51bbe *tests/mkRout
5aeaf5b07676f61dba91683b4ea0a1cf *tests/modFormula.R
eb9d0da40437ec407001e1455d31c816 *tests/nbinom.R
3af38d4ca473ebcd29306eee0e5c5ec7 *tests/nlmer-conv.R
8f8452a6f2f995a1cb2f3d98ce6495c4 *tests/nlmer.R
e6993cb36c085cea5d4bd324c96e912e *tests/nlmer.Rout.save
b36b8624afe7c55f032ce106885bf58c *tests/offset.R
24c378f0d573aa6a7a1072c21a5d4975 *tests/optimizer.R
85dced4d5883796358527f737cf2620b *tests/polytomous.R
d43a3e94c09040bc3ea42155f9ac3e11 *tests/prLogistic.R
414021fade59a06f5be62ef082ff83b9 *tests/predict.R
19e545e54e714fcfacdf54b379856d6d *tests/predict_basis.R
0497b197ec37224e61ab023c78e562fd *tests/predsim.R
9c7e4556f03887efc29729d0ae06c245 *tests/priorWeights.R
3bf355b6ea88ff815b11cd8460a889da *tests/priorWeightsModComp.R
ab4eabb335049ecdb2e93444b8474ef3 *tests/profile-tst.R
66dcc3f6afd9f22361acb569776e4130 *tests/refit.R
c06aab866cca6f2d19f1ffb6811bc682 *tests/refit_allequal.RData
f41d72b2048efd5d4aee555f78e1292f *tests/resids.R
71936dde95ed77155e38f49177119801 *tests/respiratory.R
06054d064c9c68126a351040b7b429f9 *tests/savecopy.rda
a8cba4828c6b6c2da6bb5846e6caee31 *tests/simulate.R
8375fd1d85d82c024a5a2bbab8b01a14 *tests/testOptControl.R
304b26b3344af0ec8c65b59449dd0f8f *tests/test_times.R
c01f9cfa35d54301d5ddf216832170a0 *tests/test_timings.RData
5e20fb18025336c8eb692d017103506d *tests/testcolonizer.R
e9592d9a4ec5db7ac267bb3e7edcc323 *tests/testcrab.R
f8e10f2f1e2408cdc12361246b554bfd *tests/testthat/test-NAhandling.R
60481bb722fbe5d948cd37ebdc42744c *tests/testthat/test-catch.R
cae5c8335e6a44720775ec7c3a2fea79 *tests/testthat/test-doubleVertNotation.R
e35e77e6b29924f0c5fb59e9a85225ed *tests/testthat/test-factors.R
b618f7ee081e4180bdd8ade0ab813e92 *tests/testthat/test-formulaEval.R
4fc4d941f9e8e52fcd53e30e687a9382 *tests/testthat/test-glmFamily.R
7576609e081346d2257a6a1b245b43de *tests/testthat/test-glmer.R
e830aff33142c0fd44eeaf22de05c219 *tests/testthat/test-glmernb.R
77035e2c69747009e655f43ffdad341f *tests/testthat/test-glmmFail.R
2c65fdff25b640122a7ed1288026713b *tests/testthat/test-lmList.R
ab022fa3dc016215409a559359c0e6f7 *tests/testthat/test-lmer.R
1ef8bc825d617df86ba8128cef02eff4 *tests/testthat/test-lmerResp.R
6f895a7144471055a751394792702201 *tests/testthat/test-methods.R
2d4eec2fc057cbdf474a28c0dde65da8 *tests/testthat/test-nbinom.R
7330f3016a17bcedc32a6bbc1719bc6a *tests/testthat/test-nlmer.R
c5a2a10463306115ca7aa399dbcc0fb6 *tests/testthat/test-oldRZXfailure.R
e34ec2c3060d1d2a58dbfbbb530ea194 *tests/testthat/test-ranef.R
3cd6898c8ad58bb4cfb49f3b615f609c *tests/testthat/test-rank.R
96da1f4dfe7466fe1320ed435199c984 *tests/testthat/test-resids.R
c36fcb61f49d58dd91e54dc154b47cfc *tests/testthat/test-start.R
6334ae273f2b1c89d9d629c6a1050464 *tests/testthat/test-stepHalving.R
e8b0599452416b150be68d8836fe06cc *tests/testthat/test-summary.R
9107a34cdcc4f1367a397375ab24f29f *tests/testthat/test-utils.R
2a1d2baf1203b6e935f583f79964694d *tests/throw.R
dfcdecc1050494017ef3f0e79bed0484 *tests/utils.R
a2ae9d9d7482182d85626ebdf6cab6de *tests/varcorr.R
d1c1e68d2de2348e33aa8985121df4f5 *tests/vcov-etc.R
f84eeec527edf425f54bb4754e23da61 *vignettes/PLSvGLS.Rnw
04a66fac0893c439030d497a4f3044bd *vignettes/Theory.Rnw
9c40378d0fbc0a8a8709908391461f5b *vignettes/lme4.bib
5be3689615591b57f6abc93b8b79cc4c *vignettes/lmer.Rnw
cd1dff226279f054a1e56d5daf129cb6 *vignettes/lmer.bib
7135837c11e62fd99b07ba7a9f7a82b2 *vignettes/lmerperf.Rmd
01ce27be639706b597ff257da35de450 *vignettes/lmerperf.md
