ffe9e11325d7bf2d4f825d3f8ad36c93 *DESCRIPTION
1c9497ba38c56443904b1616b9c403b0 *NAMESPACE
8bf91e1cff399d42a5102342091f855d *R/RcppExports.R
02bbca4fe8bdea75e3d5a8ab0da87719 *R/dnaManipulate.R
96042e564d75355f23a808e533748f62 *R/external.R
c5448886c18eeadff6d7c77fe4a961fd *R/fasta.R
385a2c37a58147e570e21567571fe682 *R/fastq.R
ba5f7162a868a3f2b5f9c99a711b5159 *R/gff.R
45b31d1b54070e4ac3ef5049bd064b4f *R/microseq-package.R
4093e73ad4e5a499698f64a24a0fb3be *R/multialign.R
82d307fff73f4e7de542a75b40053425 *R/orfs.R
c6e992769d403611d59cb2e00b92805e *R/utilityfun.R
35c4e01cf51db556aaca169542b54641 *build/vignette.rds
3e924f638ffd1fb3fc0b9c2a290406e7 *inst/doc/vignette.R
5f22892cee987a1c9fd80b97e14f1f45 *inst/doc/vignette.Rnw
36bb77a180c6ba1620cd3ad6b1b55035 *inst/doc/vignette.pdf
af1e142fcd921434271b775104402eba *inst/extdata/16S.fasta
7db0481fed0665a51f653fae128b126c *inst/extdata/msa.fasta
1c5c1f4e33a1902d0b6fec289f34d263 *inst/extdata/small.fasta
6df8855a9cefc7c35626f0a95a03c70d *inst/extdata/small.fastq
fc701eae38ac1319e1f4939caf74b21b *inst/extdata/small.gff
0258dbb6ee28611040e0fb9078a36319 *inst/extdata/small_genome.fasta
a7f9c30107711535be1527a0db2af369 *man/findGenes.Rd
5125a8a4c7d2bd9756a760ba3a3209b2 *man/findOrfs.Rd
429e5421e1a2d78b391010e7dfc3473b *man/findrRNA.Rd
3bc648db012791f40f750a360f8e9d92 *man/gff2fasta.Rd
d334e4bdfb21df5582324333c804470f *man/gffSignature.Rd
3570cddc65bb144c25269da64a1db324 *man/gregexpr.Rd
8ff4e9a731f44db13565ba2f228881e0 *man/iupac2regex.Rd
447e18edd90773c92b5d8b93a2f6b2ab *man/lorfs.Rd
e6dbb13204c468a252f3f42edaf0074a *man/microseq-package.Rd
56d5a66ebfc59c0d48a6ed062c1bba66 *man/msaTrim.Rd
0a7fc6855ea96f952070ee90da7f65d0 *man/msalign.Rd
3b5a96eb0f751e7dcf5cdc5c88044532 *man/muscle.Rd
6ac50fe19aaafa6ff4a8b894a8963e1b *man/orfLength.Rd
cacc045cbe4c756fd5bd6a25f43aff1b *man/plot.Fasta.Rd
e5d12d0742398ee245c957d3b74ee62c *man/plot.Fastq.Rd
c2812b1a3f06c57a84f81baf8b842247 *man/readFasta.Rd
7f655805200e50cc60e94bfe438311f0 *man/readFastq.Rd
1c24a1e2ab03982c4844c0d5e7ba106e *man/readGFF.Rd
d539f1725f23d7d05ea496fd0a883f39 *man/reverseComplement.Rd
285332ba0ae174bf523ebcef90c16aac *man/translate.Rd
9075a342959a68c339744d97fc54dd44 *src/Makevars
453b92a74f147ed25678e3ef7b9d41d9 *src/Makevars.win
f6c2d640ac445ca757b45fbe858c29ca *src/ORF_index.cpp
e1ba588dd32c3561faa065784b3178d4 *src/RcppExports.cpp
ba139b8216b1192b8a5a833529a9e606 *src/extractSeq.cpp
5f1a59b6b804b65355e719c2ffee6241 *src/init.c
4b781cb682ffa9f5e2046b0abc5f1db9 *src/read_file.cpp
6ece79a89fa2ff8f7d3dc357cbc8c604 *src/revComp.cpp
d0278db9847c345b9edf6cdc207f122a *src/translate.cpp
5f22892cee987a1c9fd80b97e14f1f45 *vignettes/vignette.Rnw
