10774e4a401b86dc612dd9139025064b *DESCRIPTION
0632cc7589c46bbf4981f0a778f1ef2a *LICENCE
738fc933c8cf7e3bf386706da4f3d534 *NAMESPACE
a6f9a58a44af031285767421c41c075e *R/PhyloSDEestim.R
b71fe70d16c387bb35e8031012ea7459 *R/bootstrap.R
f2ddf36bebd5ca1036b1cec301e383c2 *R/ci.R
9cf8f785cd1de0354b8bd76d657ac2bd *R/estimBM.R
d4e790b22f98e98a6cb6bc2e9f5f610d *R/estimGLSGC.R
95ce266d49e594a8f271d03be89632e0 *R/estimMAXLIK.R
3148e62027dd565f40bf9ba1d922d19c *R/evolmodelest.R
c8d50da2fc5e60f83864d3aea239edd5 *R/fitch.mvsl.R
7ebb10e5dd6c0ac0283fb6bb2a422795 *R/getESS.R
120e3eb951a5cf7df544ce43fcef2d7f *R/loglik.R
4d3d369498660b6f682b01305aa4b09f *R/make.states.mvsl.R
5a8a7efa822941d06aa687630b6c761c *R/matrixexps.R
f5b6d7d46957e4b398f5e26d2465446f *R/matrixparametrizations.R
496727005450e5af49a873e8196fd876 *R/modelparams.R
31e29b55516fd3460acf620ac6a7fa44 *R/modelparamssummary.R
750e36190d4d0141bbd7fcf15407a322 *R/modelparamstransform.R
47d59cdadd18bb8187b2859041b4dad3 *R/phylgls.R
2614eb2cd4c9a03dd7e2546754521942 *R/phyltree_paths.R
ab4fbb9c07d93add6987bed239d217fc *R/precalcs.R
f104ba636d9ae9f24ddb48ddf9f1ab0d *R/regimes.R
fe65f2a983d4bd861c1d56a7898d8891 *R/sdecovariancephyl.R
276eec3a6aaadb9cf8efdc0aa04d207b *R/sdemoments.R
b492eea3caaf64334857ecf9f4a75507 *R/simulVasicekproc.R
546993e610f1afb2c67160a1ac1485fd *R/simulVasicekprocphyl.R
3f10235448e0c1d7200d299f5646b17c *R/simulclustphyl.R
b5b6fe217842d0da2d0cd521be45d34c *R/trees2slouch.mvsl.R
8b645125bac7c1539b7391f9adf03b5d *R/wrappers.R
ecf040c24e58cebdeb3c3456aca17000 *inst/CITATION
eb723b61539feef013de476e68b5c50a *inst/GPL-2
d32239bcb673463ab874e80d47fae504 *inst/GPL-3
ac10777d0d269a57a0c645b6b50989c9 *man/BrownianMotionModel.Rd
8c1e229fddf9a5550e5cda12b1d65636 *man/SummarizeBM.Rd
c6845a72da4a3d600f3148af37ce32cd *man/SummarizeMVSLOUCH.Rd
fc73bf56c089dfddf49e137f0db738f8 *man/SummarizeOUCH.Rd
c0a91f15a43d7705fa26597bca628843 *man/drawPhylProcess.Rd
d08e3e82ae0f2d2948a41fae9e0caf07 *man/estimate.evolutionary.model.Rd
9300c78877a2acec7de22e749c18cae8 *man/fitch.mvsl.Rd
43998b575ed42f821a4fc92f11767a3b *man/generate.model.setups.Rd
4b9cc389716a32fbd32b1e1648304d0d *man/mvSLOUCH-internal.Rd
e471d1f7f88a1c5d973ff7dde5fd39d8 *man/mvSLOUCH-package.Rd
5beff85b11221030e9a30ddbfb6203bb *man/mvslouchModel.Rd
d26919fa67d370aab654af37337f962e *man/ouchModel.Rd
f96514152f1274f97a24be4e00901ef7 *man/parametric.bootstrap.Rd
6d62e6605ecbe5f898c8a3ed18b764dd *man/phyltree_paths.Rd
9fd4fef1adbd434f5f945c12bee96b88 *man/plot.clustered_phylo.Rd
1f2c48c8076836db0f1209a80899d19b *man/simulBMProcPhylTree.Rd
29d9fcf5fdd18106d7bcb9abeb163f23 *man/simulMVSLOUCHProcPhylTree.Rd
2cc58964ff8d1bb787c9fe38a6ca66ab *man/simulOUCHProcPhylTree.Rd
123648b78e6232fa3383ccfb89c2d3b1 *man/simulate_clustered_phylogeny.Rd
