459e95bbe76528901f7b4df73ceec033 *DESCRIPTION
b75d99caff70477f858b5635beaa77bc *NAMESPACE
3552ba6c8bcf8e5a89ff787a2eca7154 *R/AFNI_IO.R
c8790ba2652aed095f9b87342788b249 *R/AllClass.R
588fd16b276095fc8017f41f28bde1b4 *R/AllGeneric.R
64a60d1c8be34609e6e290ff70cafec5 *R/Axis.R
f9e848c651dbe322f782ecd4417f2a7a *R/BinaryIO.R
492aba20eedbf76d92e95fd2ffbf3d82 *R/BrainData.R
6ba4cfd3a1072a9c98cd2d98d1b9d39a *R/BrainFileDescriptor.R
ee5cb160bd01564e9a538bad293e151b *R/BrainMetaInfo.R
a13ca9a715478d82b27e4bb384da14a0 *R/BrainRegion3D.R
9264dd1fbd9ea8cc56450fb8c7df8d5d *R/BrainSlice.R
7396eeb2c63339e362fc7531e5d50c90 *R/BrainSpace.R
5717e1d79901cf47d85eff49bcec4344 *R/BrainVector.R
b8429e6d736e7d6143d8248afa076bc5 *R/BrainVolume.R
0e6f6b93d25da9ec59a33e41c7dd1391 *R/Display.R
f8894b85c28abaee7cf6cf03ca77d965 *R/IndexLookupVolume.R
6e39efd02e7bee9b309efb0a200bc3b2 *R/NIFTI_IO.R
4b2a00a42a9a1d0278ee02ac3bde0bac *R/Ops.R
9ab0a4f45660c15ccb04f713471635d2 *R/SparseBrainVector.R
4d3a24741fb7ebacb81145f2cedd3a0e *R/common.R
728a28483c5ec5c0a7893f2098591bdb *R/conncomp.R
c3a0fe3fbc37cba4135b2ed3fab88cca *README.md
fb14f6862838b57f8972911237767f44 *inst/extdata/global_mask.nii
5692a8fafa5dc17bd11deb11eb09fe79 *inst/tests/test-indices.R
734c0d9a03400eb409f5d5891951ac87 *man/AFNIFileDescriptor-class.Rd
8372783b41882aa3e3d4c9c057594ed8 *man/AFNIMetaInfo-class.Rd
769859bcfc4bb188fc329de29c532612 *man/AxisSet-class.Rd
328ddae3ec70aea06150012dcfc794ec *man/AxisSet1D-class.Rd
cca40d6160531be23b3c742039917238 *man/AxisSet2D-class.Rd
817f16895b4b16f9fa8b7fa5ecee10e3 *man/AxisSet3D-class.Rd
ebc0125de4b705b56108225f9daf7328 *man/AxisSet4D-class.Rd
cd9fd9bb6672667382f7a083997ba417 *man/AxisSet5D-class.Rd
9a216bd240a5d2b0dbeacd1b8ef8a98b *man/BaseMetaInfo-class.Rd
1ecfcbaf8a9a031ab99f6996c7c25c5a *man/BaseSource-class.Rd
a80260a94ab24cf798a5221e7da004fb *man/BinaryReader-class.Rd
a8471bc22147dbe123a3db0ebca709d8 *man/BinaryReader.Rd
f01eff040a04fab63dc8afa64356768d *man/BinaryWriter-class.Rd
2ab5f340664d5128999181cadd5786b2 *man/BrainBucket-class.Rd
01d8814d3973b326239ed14ab58ab43c *man/BrainBucketSource-class.Rd
4a7ebf9936c5cda535c759841afba103 *man/BrainData-class.Rd
305a7b9766d92f4362002503204edb47 *man/BrainFileDescriptor-class.Rd
282724f7b6d58acff6dc459268ba6801 *man/BrainFileSource-class.Rd
30b3bd21db994f0ee94d72003e5a6a29 *man/BrainMetaInfo-class.Rd
4a5d15d83883cca5ccad9d9409efe3ba *man/BrainSlice-class.Rd
bb6f3467f31ec05719cdc75faea7530c *man/BrainSlice.Rd
17a44f731a622dc0462b38af4bc978c0 *man/BrainSource-class.Rd
287c33da53cb939fe7ec18841f853cd6 *man/BrainSpace-class.Rd
b735587b0f58de8e46cfcdbeeb83c7f6 *man/BrainSpace.Rd
279c4d62bda15c1b6c9bca2bc2996575 *man/BrainVector-class.Rd
76a6f5e955ab810fc10e512717f1a41a *man/BrainVectorSource-class.Rd
c27ede486dcff4a0b5bc34a59f7012fe *man/BrainVolume-class.Rd
dae1663e88da67fb1f006c5c73a9eee1 *man/BrainVolumeSource-class.Rd
650303b95e813933c104876af686182b *man/ClusteredBrainVolume-class.Rd
f5aec2a2a5a551d3e5d0ed1a93eb93ce *man/DenseBrainVector-class.Rd
1c98e8ade86eda5de2555f51dc77dc02 *man/DenseBrainVolume-class.Rd
9aeb34b687ee91bf4d6e7b20320a41e8 *man/FileMetaInfo-class.Rd
e6ea522ac2481c969d7dbd2968d04b10 *man/IndexLookupVolume-class.Rd
aa71ca89b23a64575097376080242407 *man/Kernel-class.Rd
f2243124256527f824abc9bc65cc89da *man/Kernel.Rd
c0f293f0a03886a609e51ad32ece3ff4 *man/Layer-class.Rd
6bc06dff9602710cffdddc632bbe103b *man/Layer.Rd
be056b41976e63fef988f0d39bca5a8d *man/LogicalBrainVolume-class.Rd
a027e1fed447a23dbb52599c353fb3c9 *man/NIfTIFileDescriptor-class.Rd
f9a6576bf6bcf3cd333609aad2b6e6fc *man/NIfTIMetaInfo-class.Rd
590fb6a5e422b2d788bf9359e7887e3c *man/NamedAxis-class.Rd
87e7ef6fcf95e052f1e2bc9489a811a2 *man/NullMetaInfo-class.Rd
b762a2a3194cf9ab9a7998a592ee1261 *man/ROIVolume-class.Rd
156f08c60dbb454d75957b0c5b67fc75 *man/ROIVolume.Rd
341b5eb7dd319997b1d78f1a6ea9af5b *man/RandomSearchlight.Rd
56993943891a70719f42e98af95b528c *man/RegionCube.Rd
20be1dcee10c428315dc09dec3d0053e *man/RegionSphere.Rd
e5f0a867ba368f4b3c172d770108e260 *man/Searchlight.Rd
d1d7175f46e900c0c18d91df6fd45b0b *man/SparseBrainVector-class.Rd
66b3c8d68c71e4c93b422ee95f93cd3a *man/SparseBrainVectorSource-class.Rd
fccd280e42f510138e09489ceda83495 *man/SparseBrainVolume-class.Rd
25cb3fb5f0bf969036086654f7fb197b *man/addDim-methods.Rd
766ab610065864caee314ff51153a8b8 *man/as-methods.Rd
9e916e2492bc7a937fae0bd31ae256f3 *man/as.array-BrainData-method.Rd
407eff61110fbbf52958f955d2cfb6bd *man/as.list-methods.Rd
112e311b5abb104080ac8d6a4c9cd9ec *man/as.logical-methods.Rd
b41445f870c8645a7bc841c536c1fbaa *man/as.mask-methods.Rd
46a6cb9c21313783cfe5952b08e7f779 *man/as.matrix-BrainData-method.Rd
88c19477e5172d87da51497985ec2fd0 *man/as.matrix-methods.Rd
b6a391c37bde643bf8c134a3228c0685 *man/as.numeric-methods.Rd
101a5cbc83c91b6afc2a5b82d085e01a *man/as.raster-methods.Rd
04b594d57d92e4bc2608e1afccf09172 *man/as.sparse-methods.Rd
6106032ec6f78eed57db56fac5b19340 *man/as.vector-BrainData-ANY-method.Rd
c6ee731ff3dcb0876d37f967aa35a6e0 *man/axes-methods.Rd
f9e7f7b5ec5d1ab7cbbf68ed11c8ff00 *man/axisToIndex-methods.Rd
3045b81fcac89c0a23b29ece7fc6b519 *man/bounds-methods.Rd
699ba1a816f22abf7b662a85c8a4a798 *man/close-methods.Rd
8e8c9f85a0c34f6dc48ebdcb7d532fab *man/clusterCenters-methods.Rd
fae58418c1e8c2cce1d0901f08814a8e *man/concat-methods.Rd
59cdbc7b034b74f63082f46ac50b4304 *man/connComp-methods.Rd
cc5ddf4de8835032b6b992d85875602d *man/connComp3D.Rd
3c4a7e4fbd3b3e816228c1dd9440a99a *man/coordToGrid-methods.Rd
54713850e5f7253b398eda0432e6078e *man/coordToIndex-methods.Rd
b2f5b2bc28ad16c50194c2db86849992 *man/coords-methods.Rd
0046c65181f3ade36513bdb7ef82a58b *man/dataFile-methods.Rd
71448ff91f1061e4cb5bcb258cf9d33d *man/dataFileMatches-methods.Rd
7d6660c455d4e40c175bc3bbd00f656b *man/dataReader-methods.Rd
4000d0e5acd9e8ef66c1e6e2efe7b17a *man/dim-methods.Rd
c41e9167ef7384aabda3d754e3d0cdba *man/dropDim-methods.Rd
72e0b589621e25c04704c50d79079837 *man/eachSeries-methods.Rd
d69c46249a97a0542da90e375c7511ab *man/eachSlice-methods.Rd
08ad47b4b6a375511555165c43f99ec1 *man/eachVolume-methods.Rd
e9d0d8d45520fa8985f10faa2266578d *man/fileMatches-methods.Rd
60b197a20c233f154a87017216b2d0ec *man/fill-methods.Rd
fff042761b4bb782ae07ad3353594a7c *man/gridToIndex-methods.Rd
d2a26865687950faffb5cfad6cce53d1 *man/headerFile-methods.Rd
7bf98be1667c77b20791d0e0b49554a6 *man/headerFileMatches-methods.Rd
a47236db6b8b4cb8e3db6ad947ac6f33 *man/image-methods.Rd
b36769a68ca5747c5bbb79215c1243af *man/indexToCoord-methods.Rd
6327fdaab32cf733e6c5e012345f50bb *man/indexToGrid-methods.Rd
06ce05dd0e0c5e05fa0341a388327035 *man/indices-methods.Rd
3aaa65d72b04e2b32c0276c6509235f7 *man/internal-methods.Rd
8247d21710e8e7ba0ef2b1c97ffac7f2 *man/inverseTrans-methods.Rd
9bfb6684a1f4ce6dca11f1fce635e576 *man/length-ROIVolume-method.Rd
eacbb4a8ab42360fc8ec1c928f26b6c6 *man/length-methods.Rd
615edb2cd346858e8f6449ac4fc54803 *man/loadBucket.Rd
e9269752a50c99ced1f19b1854a2ac13 *man/loadData-methods.Rd
2b00c98dc741221a996f093956160538 *man/loadVector.Rd
a18d95cf8ba13784c210a24932c1f892 *man/loadVolume.Rd
ac0f0b65bbb25bc3a567619a86891997 *man/loadVolumeList.Rd
cf4f69107bde1e6f64c24aa973e8c1b6 *man/lookup-methods.Rd
6d69d57f6eeea53eb60c92d6ce72937a *man/makeVector.Rd
559214f313b3b979747c4982e2496a21 *man/makeVolume.Rd
af263f93e8ba1ee6f9f585c8d1856559 *man/map-methods.Rd
e959adcea304f8962fa4c6af7fbc3faa *man/matchAnatomy2D.Rd
89ccb2295224c3f408f163318d0b91a5 *man/matchAnatomy3D.Rd
318592ec5501508e01661a407736bc47 *man/mergePartitions-methods.Rd
593aa2a52fc117bac18d43a515b842de *man/names-methods.Rd
c28357f45273b1f4a88e6e10cd6e7880 *man/ndim-methods.Rd
2a3fb9e765c96b957844d39918a92e9d *man/numClusters-methods.Rd
f43c605ad8b58b74fd86180272357165 *man/origin-methods.Rd
036fb332cb7acf8398d1ebc64fb5f95e *man/overlay-methods.Rd
3607b3138e409c094805b78daf6db9b6 *man/partition-methods.Rd
daf50bb9f7a2b0a9814d3f7197ff4f34 *man/permMat-methods.Rd
9bd41a4a88b4aee093f22e9fc38bacf8 *man/pick-methods.Rd
3a4ea40f7cf928442344e1dd0cb349a7 *man/print-methods.Rd
cf96a92555e0b0e03a354e208ac53f83 *man/readElements-methods.Rd
40abae952115b31dca0cac7b6b8bbb04 *man/readHeader.Rd
bfcd750c3f0ecf7aa65fbb855620038e *man/readMetaInfo-methods.Rd
d8e60fb4f16f7046e61683ddef9384b0 *man/series-methods.Rd
33f43738480314972a98edf19b7c5406 *man/seriesIter-methods.Rd
685bb4a822293edc0631be0574c2ed63 *man/show-methods.Rd
29560489619dca8ba74229d6227a74bc *man/slice-methods.Rd
f24d5e80440c521c79e22b73589291fb *man/space-methods.Rd
3350c4d9388edaf1a2d0337cbe38fdf0 *man/spacing-methods.Rd
03683cb6c74e38d43be5f1e111220222 *man/splitFill-methods.Rd
85a30d43729846d0fd2dc4c9030cd7c8 *man/splitReduce-methods.Rd
df0749d2e14d967073da9acd27d57646 *man/splitScale-methods.Rd
22eedda9017b781387f037633e256b2d *man/stripExtension-methods.Rd
43633ef5cf5c62a4e32e062d1bd41a0a *man/sub-ROIVolume-numeric-missing-ANY-method.Rd
4cbdf0b896de0ee4d54a1bdbbc342765 *man/sub-SparseBrainVector-missing-missing-ANY-method.Rd
b54112477d6a1a7fac822d052847828a *man/sub-SparseBrainVector-missing-numeric-ANY-method.Rd
eb3f73db363aaeda71b6d8cfaf9a293f *man/sub-SparseBrainVector-numeric-missing-ANY-method.Rd
50897b06bad6c2410558a32c9f064fd7 *man/sub-SparseBrainVector-numeric-numeric-ANY-method.Rd
7487f14e5e1f18904187bfedd0039bab *man/sub-sub-BrainBucket-character-missing-method.Rd
3e8a14a0d1ef071b580007b2c09a3064 *man/sub-sub-BrainBucket-numeric-missing-method.Rd
fc498c6ac7847cc48a00c95859276f6e *man/takeSeries-methods.Rd
4661f0eaf2fdfcaf72b7863d51b121ab *man/takeVolume-methods.Rd
818e25b16c42e47201d1572aadf5f620 *man/tesselate-methods.Rd
6f31b1b5400752d87fc79729e1e4ba11 *man/trans-methods.Rd
91f9c70f6072ce8d54c86b80df6918c9 *man/voxels-methods.Rd
e958b87763eb55421906e1b9d660ad61 *man/writeElements-methods.Rd
64fa4a9d308b1268a72176059af50dc8 *man/writeVector-methods.Rd
c2568b75fd35d732dfad80ece833f3e4 *man/writeVolume-methods.Rd
618449d31a1cb6d8f2daaa5103ba8ee5 *tests/runit-BrainBucket.R
25da82cde17f35b85a9022bd7e232697 *tests/runit-BrainMetaInfo.R
d2b6de392524ba90842e530b189d7ab0 *tests/runit-BrainVector.R
1d4c66bee2d25ecd802feb29df723150 *tests/runit-BrainVolume.R
d9a78e736eb6ecb1011b1417e6f94268 *tests/runit-filtertest.R
afe47dac5286883f01f2954ed8a2bca1 *tests/test-all.R
