389c8def7e7ce61810330438bcc0c7f3 *DESCRIPTION
35be810f4535fbec4454a8517ba4139f *NAMESPACE
d298f85bc3cdca86983ae5377be980ac *R/aaa-.R
e6303153265786678c8b312dde9230af *R/osmose-auxiliar.R
f1384a3324e1d389b30fdf36f1c52034 *R/osmose-class.R
60e864f46c47b809023578930ed80969 *R/osmose-internal.R
c3e5eb800ead0852eb48e67a0f8dce7c *R/osmose-main.R
16a861fae751ed5b5e1c87c64eebc98f *R/osmose-package.R
8c10df11fa45bca39fe546232568410b *R/osmose-plot.R
bfe1b3b9861861a19dd45afccc6b813f *R/osmose.config-class.R
94db4b2fc2d06e753c43cc68ffa1c6d9 *R/osmose.config-internal.R
5a0dcf1e659a188df25a303f05d07183 *R/osmose.interannual-auxiliar.R
fcba3d579dd51607f92308cb45b8c60e *R/osmose.interannual-fishing.R
7b8b05cadab904dcb9ec13bdd427401e *R/osmose.interannual-internal.R
f8ac87b384a3e190bbda810d6d41d9ef *R/osmose.interannual.R
08b61551c2f4bcab6ef67fce34dc1b96 *inst/extdata/data_fishing.csv
81051bcc2cf1bedf378224b0a93e2877 *inst/extdata/inputs/calibration-parameters.csv
5e1a768d5eecc84a2a1cbf11b871b5cd *inst/extdata/inputs/config.csv
1feaf42f4d179801a327599199d06905 *inst/extdata/inputs/grid_mask_gabes_all99.csv
72583bcd0bb8d0fe59cc11aa7eaed91e *inst/extdata/inputs/osm_all-parameters.csv
5eef04d711af37cffe0f6c5fb2ea11a3 *inst/extdata/inputs/osm_param-fishing.csv
2f5ea54c7026a494feb48a0365a5e7d3 *inst/extdata/inputs/osm_param-grid.csv
28507d6bce9c806fcc143fb53ef0c88a *inst/extdata/inputs/osm_param-init-pop.csv
fdf77d900a7bd36aae5424f5166fd0dd *inst/extdata/inputs/osm_param-ltl.csv
0f6af2095152fb82385ddb58d99f3db0 *inst/extdata/inputs/osm_param-movement.csv
6f32c7faf6a6a97b084fbdc1a17987c8 *inst/extdata/inputs/osm_param-mpa.csv
bd1315aa6cb208b52259e2472a80808b *inst/extdata/inputs/osm_param-natural-mortality.csv
421af139b65b95ac283b8679d0499fc9 *inst/extdata/inputs/osm_param-output.csv
2ff0849f963c0c440309a2913bc49924 *inst/extdata/inputs/osm_param-predation.csv
269bb3fa536271cd0dd6b32aa4b6bc47 *inst/extdata/inputs/osm_param-reproduction.csv
eefeb3c1a5e9e3464f093a6a6bff1afe *inst/extdata/inputs/osm_param-species.csv
ab9f9c7ed4311848d203feec25bee73f *inst/extdata/inputs/osm_param-speciesAge.csv
0baac27f1b92ae233c1d3f2b20a392f3 *inst/extdata/inputs/osm_param-starvation.csv
e8b7a5942d8dd9ae203cfe2d3d3612bc *inst/extdata/inputs/predation-accessibility.csv
5de304864c7b3172c860b57ced88ec7a *inst/extdata/inputs/reproduction-seasonality-sp0.csv
19536fd203c4772586a1e75f893c15d4 *inst/extdata/inputs/reproduction-seasonality-sp1.csv
a36b9e222ba37c636313ca48f163c31b *inst/extdata/inputs/reproduction-seasonality-sp10.csv
e4b1be8d69c4e4a295e87045fbab8dba *inst/extdata/inputs/reproduction-seasonality-sp2.csv
743b90daec30a09c22d7cd7563e13d8b *inst/extdata/inputs/reproduction-seasonality-sp3.csv
15e04dc66c73a7a8d1db6fc0fc83ca3e *inst/extdata/inputs/reproduction-seasonality-sp4.csv
7f1f110c2812c1c5331a4d4868d95bc8 *inst/extdata/inputs/reproduction-seasonality-sp5.csv
34e93b4853ca9979a5b594c2c8982f3c *inst/extdata/inputs/reproduction-seasonality-sp6.csv
c903efdfc6c2a356a22d6a509c1ef2aa *inst/extdata/inputs/reproduction-seasonality-sp7.csv
3e016e9d32cb55ce6225954c6f565ce2 *inst/extdata/inputs/reproduction-seasonality-sp8.csv
9132be6b2f116cbb7b9eb04d644d62c3 *inst/extdata/inputs/reproduction-seasonality-sp9.csv
5223585b431368fd518b7ec9a055faf8 *inst/extdata/inputs/reproduction-seasonality.csv
9b99c0860d037a5f8304acc5f765fd9c *inst/extdata/outputs/AgeIndicators/gogosm_biomassDistribByAge_Simu0.csv
fa0aa132e04d9cd9b12231c31ec3116a *inst/extdata/outputs/Mortality/gogosm_mortalityRate-DiplodusAnnularis_Simu0.csv
15df5983457e558e93051cb5ccec33d5 *inst/extdata/outputs/Mortality/gogosm_mortalityRate-EngraulisEncrasicolus_Simu0.csv
ca1acd6d70d583f90a60a7f9d00889d5 *inst/extdata/outputs/Mortality/gogosm_mortalityRate-MelicertusKerathurus_Simu0.csv
eb8193a611589ce9d3b128c3d6926da6 *inst/extdata/outputs/Mortality/gogosm_mortalityRate-MerlucciusMerluccius_Simu0.csv
9e5b96d139759b7a59f3e29c3535945a *inst/extdata/outputs/Mortality/gogosm_mortalityRate-MetapenaeusMonoceros_Simu0.csv
5db10a40c9d536e28f91722364435c61 *inst/extdata/outputs/Mortality/gogosm_mortalityRate-MustelusMustelus_Simu0.csv
fe7fb2d24b17bcb1d7684f84d227b261 *inst/extdata/outputs/Mortality/gogosm_mortalityRate-OctopusVulgaris_Simu0.csv
ac9affd33c54f7f0ed09c5791974f582 *inst/extdata/outputs/Mortality/gogosm_mortalityRate-PagellusErythrinus_Simu0.csv
f4d897a0b03beb84b1d255631508ec0b *inst/extdata/outputs/Mortality/gogosm_mortalityRate-SardinaPilchardus_Simu0.csv
dfeaebd3d80aa39c10f89dd42cdeefe8 *inst/extdata/outputs/Mortality/gogosm_mortalityRate-SardinellaAurita_Simu0.csv
d5b5b029893279c320a55c2f48f5706d *inst/extdata/outputs/Mortality/gogosm_mortalityRate-TrachurusTrachurus_Simu0.csv
e832aa805a1d6acf312c082dfce89547 *inst/extdata/outputs/SizeIndicators/gogosm_biomassDistribBySize_Simu0.csv
f86f4c149efd03ea549217ced2dee925 *inst/extdata/outputs/SizeIndicators/gogosm_meanSizeCatch_Simu0.csv
8bb4aecafee024ec1e820826c42e9954 *inst/extdata/outputs/SizeIndicators/gogosm_meanSize_Simu0.csv
b0fe796fddd3ea144af375a30afee626 *inst/extdata/outputs/SizeIndicators/gogosm_yieldDistribBySize_Simu0.csv
8fa606e4dac2caa70f092a8e3a9c7a8a *inst/extdata/outputs/Trophic/gogosm_biomassPredPreyIni_Simu0.csv
90970770230e10d86d64bc69959beabd *inst/extdata/outputs/Trophic/gogosm_dietMatrix_Simu0.csv
8021e7c78ed33a507766452af56aa3ed *inst/extdata/outputs/Trophic/gogosm_meanTLCatch_Simu0.csv
9cd852b8f3c4ebbf79c8b8fd2ff609fa *inst/extdata/outputs/Trophic/gogosm_meanTL_Simu0.csv
d4b4ba41ec02ef0d2d5026fb763b7542 *inst/extdata/outputs/Trophic/gogosm_predatorPressure_Simu0.csv
c11305e91495ff29fcb4b090d2982e4f *inst/extdata/outputs/gogosm_biomass_Simu0.csv
785ae45dd11d77cf27f4d5b09ba8d3e3 *inst/extdata/outputs/gogosm_yield_Simu0.csv
4cb13ed71c4f8674accbb42fb258ec38 *inst/java/lib/ncCore-4.2.jar
7412252bfda0bed68f1efe2e9c1f4544 *inst/java/lib/opencsv-2.3.jar
c27f1a9effa20a665f8ca99c63b23c3c *inst/java/osmose_stable_3.jar
8ce56fd986c58e5cbf5bc88a19254beb *java/build.xml
4cb13ed71c4f8674accbb42fb258ec38 *java/lib/ncCore-4.2.jar
7412252bfda0bed68f1efe2e9c1f4544 *java/lib/opencsv-2.3.jar
7b9295d8bc0eadc8ef41e401c9dee068 *java/nbproject/build-impl.xml
a2aa46e038e791d51e8d5fc9f2972754 *java/nbproject/genfiles.properties
d41d8cd98f00b204e9800998ecf8427e *java/nbproject/private/config.properties
7d4d0ea80f21e4c6094eb72ddfff839d *java/nbproject/private/private.properties
c9e44782615945723324871ed57d1626 *java/nbproject/private/private.xml
790e4abf82ae988968109bf058c01604 *java/nbproject/project.properties
2641aaacf2eea16365376e2d3b9dd4ec *java/nbproject/project.xml
cd3386c709e0aacf46251f210264044b *java/src/fr/ird/osmose/Cell.java
2a4149e7153e8e43533c2388140dd6fe *java/src/fr/ird/osmose/Configuration.java
930c5d5c62bba91d725e2890e00b5e4e *java/src/fr/ird/osmose/IAggregation.java
c8413c61af7ca4994c9e6c62777b0543 *java/src/fr/ird/osmose/IMarineOrganism.java
d2ba38c8b060d2a3f1ca63d1b389f691 *java/src/fr/ird/osmose/Osmose.java
364995f72ba7b39161240d0a91339874 *java/src/fr/ird/osmose/Plankton.java
25a772528d88ad5b917428fd70ee1a2b *java/src/fr/ird/osmose/Prey.java
c94e7943ffd4bd7a1f021bc05a77da03 *java/src/fr/ird/osmose/School.java
2702e5db235aabeb970037f30b744ddb *java/src/fr/ird/osmose/SchoolSet.java
495401a5c35a0b61a1cd7a9a7dbbb555 *java/src/fr/ird/osmose/Simulation.java
70567b5b8c92a9e0856d3d9340d59a43 *java/src/fr/ird/osmose/Species.java
e293ce0db18a24c3a8d21980ed7884bf *java/src/fr/ird/osmose/Swarm.java
856cd6a5b4cd90d437373e2527c02b97 *java/src/fr/ird/osmose/UniformPlankton.java
7c3579fc1c63dfb4ef75f08c0c37ca50 *java/src/fr/ird/osmose/grid/AbstractGrid.java
c70323710f17a419dffcc12353caad31 *java/src/fr/ird/osmose/grid/BFMGrid.java
c4096a336155a0f74a4321678f972140 *java/src/fr/ird/osmose/grid/ECO3MGrid.java
c7465fd3f944219545f6e2a09e562a7c *java/src/fr/ird/osmose/grid/IGrid.java
434ffb22316fadbcadc347b36326b1f9 *java/src/fr/ird/osmose/grid/NcGrid.java
2022c143305e40c7eb6b8afb1d1a12a1 *java/src/fr/ird/osmose/grid/OriginalGrid.java
b2ffb5842083b711bb3087fd4d0dac41 *java/src/fr/ird/osmose/ltl/AbstractLTLForcing.java
8e4da50e8168c0ba5c1f19c7a0fadf8e *java/src/fr/ird/osmose/ltl/LTLFastForcing.java
b78bd31e8b01a98eaedaa6a08d3d2a87 *java/src/fr/ird/osmose/ltl/LTLFastForcingBFM.java
060e0b2524ff37bf76028c0144c65e07 *java/src/fr/ird/osmose/ltl/LTLFastForcingECO3M.java
0985c6e11262bc7433fe222535258579 *java/src/fr/ird/osmose/ltl/LTLFastForcingRomsPisces.java
59b1c9de0b39a2002657ed2a23613063 *java/src/fr/ird/osmose/ltl/LTLForcing.java
83367258ad522e45a91856ae0f1ce3c3 *java/src/fr/ird/osmose/ltl/LTLForcingBFM.java
b7aa6f5160c2e995f70a721d455ccd9f *java/src/fr/ird/osmose/ltl/LTLForcingECO3M.java
0ddafebf0ec2e7b9f5813ff940a70803 *java/src/fr/ird/osmose/ltl/LTLForcingLaure.java
e0f9c6ef1210274704ef16d8a5043905 *java/src/fr/ird/osmose/ltl/LTLForcingRomsPisces.java
89f9023fe6f79ab905ee5e1d7637fcd6 *java/src/fr/ird/osmose/output/AbstractDistribOutput.java
98727e4cc530275cbb0d3914da7aa278 *java/src/fr/ird/osmose/output/AbstractMeanDistribOutput.java
5f256deec9559067c48f38d1edee9aa6 *java/src/fr/ird/osmose/output/AbstractOutput.java
5b676fc1267e6c85b36369023730b620 *java/src/fr/ird/osmose/output/AbundanceDistribOutput.java
39f1459ff899e0426f50537c83c1ecc3 *java/src/fr/ird/osmose/output/AbundanceOutput.java
fe3f8d06fba46529a6a6bb9a2187f604 *java/src/fr/ird/osmose/output/BiomassDietStageOutput.java
7a528ccdc5199f722682947506c6ee38 *java/src/fr/ird/osmose/output/BiomassDistribOutput.java
d39ad1a4c537b0ef52c3edb45a092833 *java/src/fr/ird/osmose/output/BiomassOutput.java
6f6c47b85a81609d4aae1f2e5f26660a *java/src/fr/ird/osmose/output/DietDistribOutput.java
1c7c39b86c887efaed2c1043edc3fc1e *java/src/fr/ird/osmose/output/DietOutput.java
3068c05c9e21d3143f6adaba91f29064 *java/src/fr/ird/osmose/output/IOutput.java
c0c003102904b569e1e15f9e4c0de1e4 *java/src/fr/ird/osmose/output/LTLOutput.java
df1d9f6a73745ce3b91554d8c3172b8c *java/src/fr/ird/osmose/output/MeanSizeCatchOutput.java
3ef8eff1019997e6012f36e34ed2447e *java/src/fr/ird/osmose/output/MeanSizeDistribOutput.java
96902c116bf0f2735aa1aeee555b9f92 *java/src/fr/ird/osmose/output/MeanSizeOutput.java
2ab3af24ff08d94b4c93673e6e6cee45 *java/src/fr/ird/osmose/output/MeanTrophicLevelCatchOutput.java
e7800995700fb6326ba727da328aa6ce *java/src/fr/ird/osmose/output/MeanTrophicLevelDistribOutput.java
5ddd8ce71def0e5f18186410a49dac61 *java/src/fr/ird/osmose/output/MeanTrophicLevelOutput.java
f418cd2b3878149ecceeac54e2ba07cd *java/src/fr/ird/osmose/output/MortalityOutput.java
20b0174403b9de2bd24e6a602aa7ff17 *java/src/fr/ird/osmose/output/MortalitySpeciesOutput.java
ed3d673d721166e182f5dd57fea0560c *java/src/fr/ird/osmose/output/NDeadSchoolDistribOutput.java
2e9b8ab127e94a611b4783ec8e290636 *java/src/fr/ird/osmose/output/NDeadSchoolOutput.java
c0e76001923c69d32cedd71a276ea2de *java/src/fr/ird/osmose/output/NSchoolDistribOutput.java
22cfcb9fa72264648fca607e26e87a6b *java/src/fr/ird/osmose/output/NSchoolOutput.java
947bdb2af2bc2ca4b955919ac3b72cb1 *java/src/fr/ird/osmose/output/OutputManager.java
088be97f4b22a1351d8e8d32b2a4bd1a *java/src/fr/ird/osmose/output/PredatorPressureDistribOutput.java
36ba86542497053ca5066cd491cc9452 *java/src/fr/ird/osmose/output/PredatorPressureOutput.java
01eb1fe9c7d2938081e36081749ff538 *java/src/fr/ird/osmose/output/SSBOutput.java
3bc5e10ec71234c244626f69f5b11edc *java/src/fr/ird/osmose/output/SchoolSetSnapshot.java
6e81d321becbe442c08f9b1fd4e11640 *java/src/fr/ird/osmose/output/SpatialOutput.java
0daf16e4786272c4e41519b50f6f834c *java/src/fr/ird/osmose/output/YieldDistribOutput.java
4a39fa44555527482061cae65a1741d5 *java/src/fr/ird/osmose/output/YieldNDistribOutput.java
ec4c675d5d05007df42d02c60c5dd88d *java/src/fr/ird/osmose/output/YieldNOutput.java
5c3f1d52256f1d2f0d1cd50d00f8eadb *java/src/fr/ird/osmose/output/YieldOutput.java
2a541befb5e43a6c3ff63d4a055ddac5 *java/src/fr/ird/osmose/output/distribution/AbstractDistribution.java
80ba7ddee0f543d382d9484ac5be9033 *java/src/fr/ird/osmose/output/distribution/AgeDistribution.java
78a0c50bcd1e93b93cbb85f8e95cd82f *java/src/fr/ird/osmose/output/distribution/DistributionType.java
3524cfb9f5c10fd7cf804b02351efc07 *java/src/fr/ird/osmose/output/distribution/SizeDistribution.java
57bddcdef489487ff5d3d82c528cdf50 *java/src/fr/ird/osmose/output/distribution/TLDistribution.java
46b0941849682c31f199974640cc92c2 *java/src/fr/ird/osmose/populator/AbstractPopulator.java
2b92606ff1d2a4f35aff93560940cd2a *java/src/fr/ird/osmose/populator/NetcdfPopulator.java
f79c8213f19c00488daa6720178f4f53 *java/src/fr/ird/osmose/process/AbstractProcess.java
349e29b26db8933d94ccc7bf05c9c496 *java/src/fr/ird/osmose/process/GrowthProcess.java
acddb907435d55a411e83e61b37ea29d *java/src/fr/ird/osmose/process/IncomingFluxProcess.java
46bcb5e736fbf9c48ca9f9c514b35875 *java/src/fr/ird/osmose/process/PopulatingProcess.java
137f37f3e65e37aa6efa5f022c4f7ea3 *java/src/fr/ird/osmose/process/ReproductionProcess.java
2a2661c13085e3711a283588ebd2d8bb *java/src/fr/ird/osmose/process/mortality/AbstractMortality.java
3e40551734ad617b2e8b29b2858b1ae9 *java/src/fr/ird/osmose/process/mortality/AbstractMortalitySpecies.java
e212c9dc8cea635a46fbe512438ec607 *java/src/fr/ird/osmose/process/mortality/AdditionalMortality.java
3bd466efd9f440d20222158a16ddde3d *java/src/fr/ird/osmose/process/mortality/FishingMortality.java
d2bc96c9e7400a87b2f31385fc326b92 *java/src/fr/ird/osmose/process/mortality/IterativeMortalityProcess.java
920ec3b716c62e5a753cb176f3a1b19d *java/src/fr/ird/osmose/process/mortality/MortalityCause.java
ecbf9627d6b6793be303c6a135849227 *java/src/fr/ird/osmose/process/mortality/MortalityProcess.java
62b1e517e01e44bc0c011710e79d6997 *java/src/fr/ird/osmose/process/mortality/OutMortality.java
4bba42dc5daec46d354a7ed359ec1ad9 *java/src/fr/ird/osmose/process/mortality/PredationMortality.java
b5c0f5f7bf85b723f221a49cdbadfbdc *java/src/fr/ird/osmose/process/mortality/StarvationMortality.java
f32f7497d13ca037bb73fb707ac19dfa *java/src/fr/ird/osmose/process/mortality/StochasticMortalityProcess.java
dce9cce37b112ca92c9f01370d4e4b11 *java/src/fr/ird/osmose/process/mortality/additional/AnnualAdditionalMortality.java
d9ccbc73fda5cfa83491adb87d62c0b7 *java/src/fr/ird/osmose/process/mortality/additional/ByDtAdditionalMortality.java
47198623197fe9efaaa4fb9ca182cfbc *java/src/fr/ird/osmose/process/mortality/additional/ByDtByClassAdditionalMortality.java
6f5506fcbde34fc93a987a2e34e1928b *java/src/fr/ird/osmose/process/mortality/additional/ByDtLarvaMortality.java
b235dbeda7927ef284510ac1e8aef091 *java/src/fr/ird/osmose/process/mortality/additional/ConstantLarvaMortality.java
9fe0d02fe76f7b275bbe2dff534ec9e1 *java/src/fr/ird/osmose/process/mortality/fishing/AbstractFishingMortality.java
7a4aed8ffa338de32c069c7ea3d7aefd *java/src/fr/ird/osmose/process/mortality/fishing/AnnualFishingMortality.java
4964d3ea79954750d48207c488d7e74f *java/src/fr/ird/osmose/process/mortality/fishing/BySeasonFishingMortality.java
d022bc44cb6a48ca4ca7b511f7c3c225 *java/src/fr/ird/osmose/process/mortality/fishing/ByYearBySeasonFishingMortality.java
91aa51846dd2cbe6ddb9b5fc4a3e3342 *java/src/fr/ird/osmose/process/mortality/fishing/CatchesByDtByClassFishingMortality.java
f9626fbd7ab6a5a86f92d65468d7bd78 *java/src/fr/ird/osmose/process/mortality/fishing/RateByDtByClassFishingMortality.java
faa3937a8460f28f40d614f84164edb4 *java/src/fr/ird/osmose/process/movement/AbstractDistribution.java
1f864a9a8cce4f1afd5839a3301aff1b *java/src/fr/ird/osmose/process/movement/MapDistribution.java
2dc75d5182cdaeed4f50e97a3f7384f2 *java/src/fr/ird/osmose/process/movement/MovementProcess.java
cb740908d170796d65cc4ac4c1c554bc *java/src/fr/ird/osmose/process/movement/RandomDistribution.java
31e8f469e1a738ba8ebc5ef368f233c8 *java/src/fr/ird/osmose/stage/AbstractStage.java
c50779048d43a7b1b777427223daaa99 *java/src/fr/ird/osmose/stage/AccessibilityStage.java
453f3e047560f5a87276d3f41d217496 *java/src/fr/ird/osmose/stage/AgeStage.java
94471a77981c755673402d17b9c8d676 *java/src/fr/ird/osmose/stage/DietOutputStage.java
72fcaac6b85aa5a01c6f935596282fc7 *java/src/fr/ird/osmose/stage/IStage.java
be06482473db21162a9443c31b8db289 *java/src/fr/ird/osmose/stage/PredPreyStage.java
1c9791f6ec8c0b54d238557a29c1e09b *java/src/fr/ird/osmose/stage/SizeStage.java
b903f366f4948291497d88da2bc5cfb0 *java/src/fr/ird/osmose/step/AbstractStep.java
3a23358feb7e03d703ecb61653133242 *java/src/fr/ird/osmose/step/DefaultStep.java
020d8115a90b233ce722f9ac29e24af4 *java/src/fr/ird/osmose/ui/GridUI.java
a0d612481943f0dceaf4d8d3cb5bfb39 *java/src/fr/ird/osmose/ui/SimulationUI.java
4285cfa6e91f6b986d6371fd6d4b3646 *java/src/fr/ird/osmose/ui/SpatialMapUI.java
593b517040e442ba0c87045f06ae1fc4 *java/src/fr/ird/osmose/util/GridMap.java
d5aa67ef75cda13467e50a9c3a2774e7 *java/src/fr/ird/osmose/util/GridPoint.java
05a836c316511bba7daa3b3fab51a729 *java/src/fr/ird/osmose/util/MPA.java
6f7d59b8358958beffb8ff38f785515a *java/src/fr/ird/osmose/util/MapSet.java
c43584e00860ff893e36eeeae83fb048 *java/src/fr/ird/osmose/util/Properties.java
f32e7666b04f030ff51682b1e281fe51 *java/src/fr/ird/osmose/util/Separator.java
f077e2bbdb8af9020773766bb9aeb8d4 *java/src/fr/ird/osmose/util/SimulationLinker.java
95e92e6075d21fe55923cd6254509598 *java/src/fr/ird/osmose/util/XSRandom.java
51705ff49956982d28accecbc6060a60 *java/src/fr/ird/osmose/util/filter/AliveSchoolFilter.java
c86e7f7448960569b4811060c862aa6e *java/src/fr/ird/osmose/util/filter/DeadSchoolFilter.java
ec7b5fe5f128f532c78ff8c773efb09d *java/src/fr/ird/osmose/util/filter/FilteredSet.java
b7f7bd18f85e149c0d61a9c24da6720b *java/src/fr/ird/osmose/util/filter/FilteredSets.java
4442873e2a301f98381962f412becc64 *java/src/fr/ird/osmose/util/filter/IFilter.java
80ccfb3b9864ba27d727e873f1570865 *java/src/fr/ird/osmose/util/filter/OutSchoolFilter.java
5704fdab8b381fbfb8975f27a3adfec8 *java/src/fr/ird/osmose/util/filter/PresentSchoolFilter.java
c5fec4523fbc8e70f5bb051c0866fb68 *java/src/fr/ird/osmose/util/filter/SpeciesFilter.java
1f1b7c1db32a7b4b046393d2c776179b *java/src/fr/ird/osmose/util/io/IOTools.java
a5e11d2e96896debed1e5f27c67ca8eb *java/src/fr/ird/osmose/util/io/MetaFilenameFilter.java
b8a42b4a88f21aedc1803c9fdf0c501f *java/src/fr/ird/osmose/util/logging/OLogger.java
2716cd5a71f82b76572746444e1e61c3 *java/src/fr/ird/osmose/util/logging/OsmoseLogFormatter.java
ac7b5b8c0800832b1fdd9aa66b02aaaf *java/src/fr/ird/osmose/util/logging/SimulationLogFormatter.java
141b6958d2957ada5a47a974aa247feb *java/src/fr/ird/osmose/util/timeseries/ByClassTimeSeries.java
1376c43e335d9e772fe6c3da04684fea *java/src/fr/ird/osmose/util/timeseries/ByYearTimeSeries.java
b44a5e146e247284b75ce3eae07d81b5 *java/src/fr/ird/osmose/util/timeseries/SingleTimeSeries.java
3e7d914d739a34ea7aa7d57bb66ea067 *java/src/fr/ird/osmose/util/timeseries/SpeciesTimeSeries.java
02c4d74eff5e9d70470398a12b46d53a *java/src/fr/ird/osmose/util/version/AbstractVersion.java
e455d787c72f6c61236652f517602cee *java/src/fr/ird/osmose/util/version/Version3.java
f60bb98fd98aa426f3fb00e5358c4d56 *java/src/fr/ird/osmose/util/version/Version3Update1.java
aeef3059a75552192744caef770ad841 *java/src/fr/ird/osmose/util/version/Version3Update2.java
44ee733e973011b6fc1ef619b5f3b9b6 *java/src/fr/ird/osmose/util/version/VersionManager.java
be2a04537c35cf9b783660c3f5c6cd10 *man/configureCalibration.Rd
a84765006c6c7bd476eb798cef49b57c *man/getAverageMortality.Rd
4ad48c55f451b5a1e149ff7b89177207 *man/getFishingBaseRate.Rd
9134f4b236a6166b5469c948ae91b36e *man/getFishingBaseRate.byDt.Rd
9e06f50c6fb417d82ba6f9fe0eb36b0e *man/getFishingBaseRate.byYear.Rd
5cdffcb82ee7c3821d40e719ab90b3cd *man/getFishingBaseRate.constant.Rd
2aee307ad34e7ddcfbb01a87bff3e467 *man/getFishingBaseRate.linear.Rd
6e512652cf688e01ad7b0ea2ae066186 *man/getFishingMortality.Rd
795592ff9b1c576ca0dd14817ee7b12e *man/getMortality.Rd
cbcba0d148493f50c8a7125c57071abc *man/getMortalityDeviation.Rd
de051ba402b03639c1c915101e6144e4 *man/getOsmoseParameter.Rd
2859b07b1aa922df51bacacfae5a2a59 *man/getSizeSpectrum.Rd
a76ccf1dafd3168c263af5f41d97b73e *man/getVar.Rd
288203a18359db752e0ae1de898783e8 *man/getVar.osmose.Rd
96a39091fa843f65ba468da6050f2f4c *man/osmose-package.Rd
70c8e8032a6bbcc3c3a564ac12179d42 *man/plot.osmose.Rd
0d23bbdbbd061323ffb8f798e91a9208 *man/print.osmose.Rd
51f3aacee272be29c97e57b2b7bd8d8e *man/print.summary.osmose.Rd
88df1438484d6a0e06f1ecaf0fdd1713 *man/readOsmoseConfiguration.Rd
50e257b645519d7434034d2e53bcb6d1 *man/readOsmoseFiles.Rd
36ad2262cf99c07839ea6ae236d0cb58 *man/read_osmose.Rd
e69048138e3cebb8d6d4c7e840e740b1 *man/runOsmose.Rd
6083d39311e5b50d96bdb1b62aef67fe *man/summary.osmose.Rd
51ee5e779a98347ebb6d0cef2ae00f68 *man/write.osmose.Rd
5af500812d848320abd6f653439af9b3 *man/writeFishingFiles.Rd
