Package: pez
Type: Package
Title: Phylogenetics for the Environmental Sciences
Version: 1.0-0
Date: 2014-09-16
Author: William D. Pearse, Marc W. Cadotte, Jeannine Cavender-Bares,
    Anthony R. Ives, Caroline Tucker, Steve C. Walker, Matthew R. Helmus
Maintainer: William D. Pearse <will.pearse@gmail.com>
Description: Eco-phylogenetic and community phylogenetic analyses.
    Keeps community ecological and phylogenetic data matched up and
    comparable using 'comparative.comm' objects. Wrappers for common
    community phylogenetic indices ('shape', 'evenness', 'dispersion',
    and 'dissimilarity' metrics). Implementation of Cavender-Bares
    (2004) correlation of phylogenetic and ecological matrices
    ('fingerprint.regression'). Phylogenetic Generalised Linear Mixed
    Models (PGLMMs) following ('pglmm') following Ives & Helmus (2011)
    and Rafferty & Ives (2013). Simulation of null assemblages,
    traits, and phylogenies ('scape', 'sim.meta.comm').
License: GPL-3
VignetteBuilder: knitr
Suggests: knitr (>= 1.6), methods (>= 3.1.1), lme4 (>= 1.1-7)
Imports: caper (>= 0.5-2), picante (>= 1.6-2), quantreg (>= 5.05),
        mvtnorm (>= 1.0-0), vegan (>= 2.0-10), ade4 (>= 1.6-2),
        apTreeshape (>= 1.4-5), FD (>= 1.0-12), plotrix (>= 3.5-7),
        Matrix (>= 1.1-4)
Depends: ape (>= 3.1-4)
Packaged: 2015-02-11 15:25:25 UTC; will
NeedsCompilation: no
Repository: CRAN
Date/Publication: 2015-02-11 19:56:51
