e5e521bf597c237154768b1883a0ae00 *DESCRIPTION
31f45aac6466c409fbc4ce166ad33bba *NAMESPACE
4b2e5f8b5abf1628c992028301d620ae *NEWS
732854bcd1b75948792311726a49d5ae *R/AutoFitPhenology.R
84b0efc5f2198f895aa4fd1518eba532 *R/BE_to_LBLE.R
e75f2f7120453d8196f692c5c281fe29 *R/ECFOCF_f.R
841d70280c22cf74bb50b43fb7f222a2 *R/Gratiot.R
0a5ab3487d4a12c9463c087448ed5466 *R/IPFit.R
94a85d8ed0182dcf3bd990965ec8853c *R/IPModel.R
a2caecb4c928ccdbde22bb2cecba849f *R/IPPredict.R
e3737318afe9012dfa79be9c3a55623a *R/IPlnL.R
e9f39c234180f0517261b118dda2ca81 *R/LBLE_to_BE.R
c26b6f5dbf870de7c12f45b42d2b9147 *R/LBLE_to_L.R
918724b13ba502f4074102974773a236 *R/L_to_LBLE.R
0fa2499cce4f2f6363d102dd9074921d *R/LikelihoodRMU.R
7369414cfc09a66791be18e795a6896f *R/Likelihood_phenology.R
2b57c576047ada2f04d763bfd401e693 *R/Lnegbin.R
30ee96a30945ff26912d5ca88fad72a1 *R/MarineTurtles_2002.R
9e2eb56d04f9314d6573be35a833995a *R/MinBMinE_to_Min.R
8665d38e7b72a75618e9a841ab529dd3 *R/TableECFOCF.R
a5c6127dbae13e6e94c4a022fae41699 *R/Tagloss_L.R
c8ee706c5681f3cb7e0d2c00a8ce5f58 *R/Tagloss_LengthObs.R
3c93832ef4688438f123ab9e8cef5d4a *R/Tagloss_Lind.R
ff06056e6c1ced381ff321fed78465fe *R/Tagloss_daymax.R
8e56d28826fc5407235ea94ab0a3c51e *R/Tagloss_fit.R
3f5fb5ca446abf80a56e70751f11b1bf *R/Tagloss_format.R
3c384ac54c2225c66eafb2a987cbe208 *R/Tagloss_model.R
570755c97afe77a5f86028392d8a6ae1 *R/Tagloss_simulate.R
e7f4dd858749f79a31e1c0f8a8b7b3bd *R/adapt_parameters.R
aa6829facc9e3ad8c5dce96b7cff28fc *R/add_SD.R
6d96bbffa4918a959551edd5bab8d094 *R/add_phenology.R
9b152d6f11cee711473fda90b4471125 *R/daily_count.R
9cddd08bf83e959b547b60a017a024ea *R/extract_result.R
35476a238449958d85895e29bc9aa1e2 *R/fitCF.R
168eb25a426f142148c9f600f3b78df3 *R/fitRMU.R
222974babc629176b25164451a64ccd5 *R/fitRMU_MHmcmc.R
160bb50cda51e2a8abd669a264405d68 *R/fitRMU_MHmcmc_p.R
856b7bd3efd31ce9e5b0c0ddf8b61752 *R/fit_phenology.R
f47f6f79d3d1414fa875d43b3b00edeb *R/format_par.R
d0ca8bb54f17d2bc416efa4ff061f36b *R/lnLCF.R
09eac8f6716c1750dbbbf5e1fae4dbaf *R/logLik.ECFOCF.R
6fa88bd830619fef0410d95a47a1c6e3 *R/logLik.Tagloss.R
32c250d968eee3ee496142d0f6c94e30 *R/logLik.fitRMU.R
6279d9f1eee6fbd0718d41708ba17472 *R/logLik.phenology.R
8bdfe30d8b8b07793d517665147a106c *R/map_Gratiot.R
10591e3e03a9beab87ea5639aaf9b663 *R/map_phenology.R
7956aa4a564851bc32bfef504fc10050 *R/onAttach.R
6dd85a00fd5336940e06c15ca17664cf *R/outLR.R
d97592d19119ef75227da92463dbb8a4 *R/par_init.R
6417b6d643ebe42940dbd39a1a23eafa *R/phenology-package.R
c37286ea434f9fc56240337e1b718809 *R/phenology.R
93904b38ed6774dac26356b15b52b8fb *R/phenology_MHmcmc.R
171a2c14116481f874b0e3c3e39c0c62 *R/phenology_MHmcmc_p.R
44197c5ff96d4270330aea2c836a9c72 *R/plot.ECFOCF.R
f52de49446efd065265f8dab1d714bd3 *R/plot.IP.R
a82de5711bac1ff3bb0cb0d1c79274d9 *R/plot.TableECFOCF.R
96d91e58d3f192005f86726ff4b9d795 *R/plot.Tagloss.R
c9488918dbfbe4d7c82a3498b17922aa *R/plot.fitRMU.R
bc4fa843899d35a980c54d496e0fe250 *R/plot.phenology.R
fc4a775aa1669140daab3b751dcd230e *R/plot.phenologymap.R
0157fbcb03156543306845cb85828eef *R/plot_delta.R
d2a0602ca6b96fcbdd677d95e23941b7 *R/plot_phi.R
045861b966454ac80a0987bc872f0c81 *R/print.phenology.R
8f7f2219c90a5d875dc1ef72d7b3c88e *R/print.phenologymap.R
3947a768299708ea6ee95448fa87e7b5 *R/print.phenologyout.R
368f80ace7219b544706f3a31eb9b53d *R/read_phenology.R
d50edf4ed3974f59fd1ded31d18b7359 *R/remove_site.R
88e7d20da58f57bdd0028e3a4aec3795 *R/repeat_last.R
5779401bf60a3015b0331ec1fa89cd33 *R/result_Gratiot.R
e62e773f2cdd113a05c51b8f0b04cc28 *R/result_Gratiot1.R
1bb95243ae8e692c56eaa4541b441725 *R/result_Gratiot2.R
a0296b28b31de031fa8a24cbd54ad610 *R/result_Gratiot_Flat.R
0937b71aec08b9fd32652827572887da *R/result_Gratiot_mcmc.R
8b8acb324d4efa6a601b6182b1745f55 *R/shift_sinusoid.R
ed1d5219700efd14158ee37d54143e44 *R/summary.IP.R
97c98bca21acca84aafa7a52914bd8d3 *R/summary.phenology.R
10557d72960867f462b8ca1311b2ef5f *R/summary.phenologymap.R
b57195a5b6c6fb610627c8c2ea5173ca *R/summary.phenologyout.R
c0a60a0722e0d3dc2d866d62cc2325ca *R/toggle_Min_PMin.R
d22856f928da07cd57a93417278e84e7 *data/Gratiot.rda
b1beda4f92ab00bc1cb96c59a6cfd9ff *data/MarineTurtles_2002.rda
fee1f50cb21aa8a8ca7882e42ff66584 *data/map_Gratiot.rda
303ed5d6218f18116b0f75d07f5d3082 *data/outLR.rda
13f32b0dd1782de683a4c7098023db63 *data/result_Gratiot.rda
2ccfd32a64e638acf5fdcee27e4c83db *data/result_Gratiot1.rda
d855176c0ac5b9a08a47a7c3171b2249 *data/result_Gratiot2.rda
91a91301166a570976e81d653ef61078 *data/result_Gratiot_Flat.rda
38839c232447f0e95b7cfcdbd2d86085 *data/result_Gratiot_mcmc.rda
fce5ac7c0e878dd4832abbc52ff7cfcc *inst/shiny/babel.Rdata
3d5a996dcf793eefbf943474956910d6 *inst/shiny/server.R
18548b523629f4c1e2e69c94442e0c51 *inst/shiny/ui.R
ca0c55ff62aff6ad66c52bd78b65810f *inst/shiny/www/PDF.png
4a03aba6371f09fa1d4622fc1cd4aa54 *inst/shiny/www/fr.png
1307cf1b03198650e9b031757c207f61 *inst/shiny/www/gb.png
ab92332e28d13c05d5072f31b785b862 *inst/shiny/www/logo.png
471881731ead16538e0d7b4bfedc9317 *inst/shiny/www/logoRASTOMA.png
7220d205644353f9a26cb3954680afb8 *inst/shiny/www/logoSWOT.png
301988320a697ba5e7ee0e2dba9d3a6c *inst/shiny/www/pt.png
ae1252f1b80aae632fad1cbeaa6437d2 *inst/shiny/www/sp.png
03758f720ea72ca0332ed45dbfeb635d *inst/shiny/www/spinner.gif
f3b2555fa9a4179fc02c5876b7cf7ef4 *man/AutoFitPhenology.Rd
986bdf44b10381a68fdb97846318281f *man/BE_to_LBLE.Rd
0010b9d38781eb2707f6ab536b6f0ecd *man/ECFOCF_f.Rd
fb02711cfe5a6601c6103cdd60265954 *man/Gratiot.Rd
cd050919cac6f16479d130308beae0e1 *man/IPFit.Rd
7b4f2af18a8186d2b41362f3ac4832c0 *man/IPModel.Rd
22f1e5fb513c884d00034edba2e05f48 *man/IPPredict.Rd
caa2a03cedb443be2a744273f2dc7e3e *man/LBLE_to_BE.Rd
ea1566502b441cbc95eaaaaee612f445 *man/LBLE_to_L.Rd
8537188a6e73c0615d181d27f5d55520 *man/L_to_LBLE.Rd
0ab17f985d0e4edb7f6ddd910082c5a6 *man/MarineTurtles_2002.Rd
88852d274555981e47547ac32d3db1dc *man/MinBMinE_to_Min.Rd
79eaa9fb6e68c7c449a46d3733c60807 *man/TableECFOCF.Rd
6f126678fc65ac9762a33f0389d290a1 *man/Tagloss_L.Rd
a2fad093cca2db0f0ce15657a9ef79a3 *man/Tagloss_LengthObs.Rd
2d8dc0d1a947594c4851c922f9a2dd26 *man/Tagloss_daymax.Rd
3e7f6ec5484f9265cd7fdbd0527d815b *man/Tagloss_fit.Rd
b613f984cccf5de7321a91e13c59ea8a *man/Tagloss_format.Rd
0fa43d258673b4078c7bf69d74465521 *man/Tagloss_model.Rd
20a7ed0f5207e44ab267244946b0aba8 *man/Tagloss_simulate.Rd
de44ef18edf7f2f9d7fe4c434fb003c2 *man/adapt_parameters.Rd
42fc45d807ab32f975ca371efc7eaae8 *man/add_SD.Rd
c53329f0d3a2913629a0529febc7a638 *man/add_phenology.Rd
df2047875fe1c0e57d73c8fa2bbd658e *man/extract_result.Rd
d7f62b201c0533010c19e73f38ef5863 *man/fitCF.Rd
94c6ae5d098a8898cba68c900fc1bd1d *man/fitRMU.Rd
d199dd24a4fd45033de8c286b9d415ab *man/fitRMU_MHmcmc.Rd
1c3c06472f9069d940bfd760daf8da2b *man/fitRMU_MHmcmc_p.Rd
2caf5c0d7d441d16c12ac93f096e0d2f *man/fit_phenology.Rd
b51d78456a00d9d1c2b86c790fa2b1ff *man/likelihood_phenology.Rd
b58d267cccbfd1455c97f23a3b458f32 *man/lnLCF.Rd
f8efc843a0c460a6e290b7bf31e7642d *man/logLik.ECFOCF.Rd
be776ac96fd59635bf533f385fd8a2b4 *man/logLik.Tagloss.Rd
992ae54ef589f2a6096db9ea2e7af176 *man/logLik.fitRMU.Rd
5ee14a9240a9610fa778a04c71271f45 *man/logLik.phenology.Rd
f2dbf10f151dedfe06166d61b93fc5b2 *man/map_Gratiot.Rd
74e8702a2fec058d582e7dd20c2dc2d1 *man/map_phenology.Rd
6e08b9f3ac1a8a96754012f941c59eb2 *man/outLR.Rd
da9ddb1736be29a8c153f4cb011eaebf *man/par_init.Rd
c1a9611491cf81c72af2ae11d20698db *man/phenology-package.Rd
566a21a62b0246c6ef19997b1de56d58 *man/phenology.Rd
79be994eefc92ed0caafcea48ab36765 *man/phenology_MHmcmc.Rd
8bd562587be187dd8ad5cc35288e5b5d *man/phenology_MHmcmc_p.Rd
4126ba4eefb7b7e1045dbb6538ba7249 *man/plot.ECFOCF.Rd
56be370476cf63bc8756d0d488d10373 *man/plot.IP.Rd
e7bd574504a0060342d48b225cc7f984 *man/plot.TableECFOCF.Rd
62f4280a2c32df3d9eebde8cf1ab32cf *man/plot.Tagloss.Rd
f23fec4d4944d86f460a535dbd56bf3e *man/plot.fitRMU.Rd
aa7f6b37f0bcfa5dbb8d728e3db0875e *man/plot.phenology.Rd
0cc459e4f638d89c4d23aa1d014175ed *man/plot.phenologymap.Rd
fc229db2956bb303a0a3f34a958c0c88 *man/plot_delta.Rd
6b607afe2bf2d7c2ec6a2fe1cf9aca66 *man/plot_phi.Rd
a19488a6a09e3964ae56800f605d48dd *man/print.phenology.Rd
ac50ca89d8b5dd77f061aa24ce1ebc6b *man/print.phenologymap.Rd
f5abc1c6b214e931444789e12fa9ef62 *man/print.phenologyout.Rd
1f006e7f828d9519d611b09bf2317d84 *man/remove_site.Rd
011120d2d129a85ef035023b9e9f915f *man/result_Gratiot.Rd
6edfe9a0d89f02e1411ff70c24bf0d6d *man/result_Gratiot1.Rd
d2d6054576465814c7c44d57b70c610e *man/result_Gratiot2.Rd
5b497998448762f5f3db6bf52d704428 *man/result_Gratiot_Flat.Rd
2f1bb18b2938b445f44a02c700bbec5d *man/result_Gratiot_mcmc.Rd
58992c4bf8ddb1dbba6b24e7a9129768 *man/shift_sinusoid.Rd
bfc08ef4b15851c67beea191230b1303 *man/summary.IP.Rd
de914b550eea50e28fa3c6ec3cc44015 *man/summary.phenology.Rd
3e3bb487ca7fa4ade5d249474225f95d *man/summary.phenologymap.Rd
c3f1501860f2f1f86476ccd4ea07440e *man/summary.phenologyout.Rd
256c493746cc43e54207562ddf631274 *man/toggle_Min_PMin.Rd
