cc205c86754d451f910fddfdf1c2a5fc *DESCRIPTION
54a265643a4c7560c9e24d40929d7b8c *NAMESPACE
6b0776a05d22a6a0e851cba157883b45 *R/add.everywhere.R
ab83760e8b04218ecca3fda0990b97c8 *R/allFurcTrees.R
c7ac150f3fe5c2f5f8c43ba714ef2a7b *R/anc.Bayes.R
56b85f7aa49584b6aab2cc75a4232077 *R/anc.trend.R
0676ff6e0a9c20313ef37088dcc65a63 *R/branching.diffusion.R
938700f5c711d35cd5469018fbc07b7b *R/brownie.lite.R
7a60eaf8270899bec57c649379fe29a5 *R/brownieREML.R
4e4d9a3046399f39c6bea5bff5d6627a *R/drop.tip.simmap.R
e42f0ab668300d452bcc1e4e12ab3b61 *R/estDiversity.R
803441943ada9faf3fa4c637a34c816a *R/evol.rate.mcmc.R
10011d77713c396305dc6a575eb28d71 *R/evol.vcv.R
7935179a771ca9af09050678e76d8a9d *R/exhaustiveMP.R
bfe9d45e7a126e26d4ea0c10e7851350 *R/fastBM.R
42336f9999b283b597d838b09d1f2657 *R/fitDiversityModel.R
2d2ea5e7e26774f4a6c6b5aaf1120842 *R/ltt.R
1a57f7ae8dcf530cbda30b282d513aa0 *R/make.era.map.R
608ede966296989bc8aa761f5c0ee6ce *R/make.simmap.R
23b9e915f9fc8b9c46d81c573afbbedc *R/map.overlap.R
67b1c9912e65cddab14fb9c67f28eb19 *R/mrp.supertree.R
bf754d944a21c90497cb138df44f215f *R/optim.phylo.ls.R
ee44a588b3896a3ac399b99f87484fb7 *R/phyl.RMA.R
223c4a5ea22cf875b0c748f926dd3213 *R/phyl.cca.R
0d64f29449e03cb398815022e3f3d022 *R/phyl.pairedttest.R
e7a448e7da73e2509d26f1d743aa131e *R/phyl.pca.R
fbecbd32a4d78cf747d92994303fd565 *R/phyl.resid.R
f1fe30a068d21211aaaa2f18c242b632 *R/phylANOVA.R
0df6241c5cca6db4a5ede9a254dfcba6 *R/phylomorphospace.R
3beb34bacc5b6c9991e998bef8780eb1 *R/phylosig.R
01f9ce3df1c3a993c5241a92efe02eb9 *R/plotSimmap.R
f6c203f120a423400fca2908e8f47758 *R/plotTree.R
20d93417514de8d6caf78fe4f71fc33d *R/read.newick.R
7ed3c7ec495d6bec8d4e8452af266cec *R/read.simmap.R
5109e8b0fb8ccfb68c9d8a71947f8cea *R/reroot.R
9e907ae06d36a0aa47c98756be6792dd *R/sim.history.R
63e278217e6d0f5a7fa85d52d6b230ee *R/sim.rates.R
c8bfa07dd3238d97fcaafe5a369e5e89 *R/starTree.R
4d55481533d046d11312c9bcaebc7a28 *R/treeSlice.R
2837b7316206703ca7e5d05977dbdae9 *R/vcvPhylo.R
f8b9c547e0cd28c52e7a2ba438e9227d *R/write.simmap.R
312e829c54de17a2b49ee273b08a8cda *inst/CITATION
c045100ab906377256de49e54f409c40 *man/add.everywhere.Rd
037d504c93392bcb825ede070180aa15 *man/allFurcTrees.Rd
e332cf527cee9ffc897651d4b9d4e635 *man/anc.Bayes.Rd
da1a8c66e11def6240c80f0120a26cc8 *man/anc.trend.Rd
951d591b719bc01e2afb6216f29736d2 *man/branching.diffusion.Rd
cf02dfa89c07977701f4483572b15d3e *man/brownie.lite.Rd
05395bcf878736a38f4bd0499680524f *man/brownieREML.Rd
8e9ff701367bae65848b46f0b4d76de8 *man/drop.clade.Rd
5c300fbebd2125339657a2a9a4ee6fb0 *man/drop.tip.simmap.Rd
a1ea9b99a300251195b21e5ed1d4ff37 *man/estDiversity.Rd
37baab7bd4d1af1fd826d42df36e354a *man/evol.rate.mcmc.Rd
af9f8070d049f4c50d96d8cff9b32435 *man/evol.vcv.Rd
5abb3da8cdc8d7b473692d1152c4370d *man/exhaustiveMP.Rd
4c389f590d3359591505b303dc90d8b2 *man/expm.Rd
d816110bd30afd4629f34f7af1add732 *man/fastBM.Rd
feeb79f9989d6457c64051113766a3bb *man/fitDiversityModel.Rd
c707479f721376bff5cf2cf048a6e9c9 *man/gammatest.Rd
f573f42a00cd1c80d3d87b458d27b3f4 *man/lambda.transform.Rd
dbf2e33167ab88132131d9e44c30ae12 *man/ls.tree.Rd
91a7cde6c5564696785fd0ef83dc6063 *man/ltt.Rd
f58ea7e2c1245029f35d424762fb3541 *man/make.era.map.Rd
d046e684b6c6aa7f6896ee3849654716 *man/make.simmap.Rd
949118e0e7b0934bf43cd1f2c98c0e10 *man/map.overlap.Rd
b56312fa14d5f884980d9a6e5292be5b *man/minSplit.Rd
1e032dd9d384b514bb30fd0cd797469c *man/mrp.supertree.Rd
8e06343dcf53065d766225f0583bb57a *man/nodeHeights.Rd
88af2f37da99c9ae7d97453e1589afe7 *man/optim.phylo.ls.Rd
c82040760b0297a7e994bcdd4b0c2c64 *man/paste.tree.Rd
67ab00bea1d0f337e1e9e0b2c6291034 *man/phyl.RMA.Rd
4b814a49683d872e0c1ae2302cb41dbc *man/phyl.cca.Rd
41e368fc24b160cb771d57274e609677 *man/phyl.pairedttest.Rd
109ddd9420fbf1d229e0af777e14cdf6 *man/phyl.pca.Rd
87181f76ac8f01bce9ee344eb7d75630 *man/phyl.resid.Rd
53dd8bcf73b492e62c162d361d7a5322 *man/phyl.vcv.Rd
26ba048f9ee2ca04afe21e2ad0135d4e *man/phylANOVA.Rd
a92ed581b5fb7790cd34eb762dbf6e64 *man/phyloDesign.Rd
891a6e4c1d997a259f050b9b5de48454 *man/phylomorphospace.Rd
2c33c285e22521c18dd3ac43abbd31bf *man/phylosig.Rd
54f4a356cb50be2d53ddd862ec2d2c0d *man/phytools-package.Rd
e0da0f749e75d33d333869ba926f5e46 *man/plotSimmap.Rd
cbf05013d984d5025baaf62b906e8a09 *man/plotTree.Rd
8fe8336fac36d153158491eaaf163155 *man/posterior.evolrate.Rd
37f6d7a0b5d8645342945e75b364609a *man/read.newick.Rd
7bd536b5d2a58bd7ecc1ff460a216836 *man/read.simmap.Rd
8b964a16c2dae4bb5adb34e790733315 *man/reorderSimmap.Rd
3b41e4db6b99dae1e825929485373f5b *man/reroot.Rd
c2ddda71568f4ce0e936788c9b7c162b *man/rstate.Rd
e6d3f8634bfe81e74e5ce3b28d1b267a *man/sim.history.Rd
32e829bc6c4b2d076efc99951a392e08 *man/sim.rates.Rd
8e997f4467048e7a8da84e1a879f6513 *man/splitTree.Rd
a6f1f248cbfbad4354f739bdd1e929d4 *man/starTree.Rd
6dc9479ed5af774297bf998edf4f79dc *man/treeSlice.Rd
75a8e24ac8e6779d95816e99962340b4 *man/vcvPhylo.Rd
7e8dfa3b10debafd7859fb2047b45f9f *man/write.simmap.Rd
