df16228ce8170c8aafbe4d77bf0b38be *DESCRIPTION
b706e91fccc327231c34c3996906630d *NAMESPACE
4f61c98cec409163d28a078ecd7eb168 *R/abc.R
5e14368c365b7307fbba39190e4b7f70 *R/accumulators.R
f631c0b055cd77901154c1d136aff661 *R/as_data_frame.R
cb687fab11bfce9f1a2d726c243d5b92 *R/as_pomp.R
031733e115edd4569950461819d2e199 *R/bake.R
7a698f60ac19e40e11b94809ac48d845 *R/basic_components.R
2de51ec5eac107a707ba48c0cce732ef *R/basic_probes.R
5f3038c1a11489de016c786d5a1b24f1 *R/betabinom.R
b6f09f68592557a004deb8d82ed0868c *R/blowflies.R
feb611379a7abf31a353e643f17c68ba *R/bsflu.R
14cff319fe261aab1be3c232eeaec1dd *R/bsmc2.R
bc9dc3807f0a8a30af9823d4b4e1f4fa *R/bsplines.R
cdd887c3f2548eb8310f530f6fc456e6 *R/builder.R
da34d214ed22fd5b82971aec28d2419c *R/childhood.R
70dd985d9529795fd8729c424a7acc35 *R/coef.R
2bc1b38d8b86bc67563ee5d8e6bf810c *R/conc.R
07cd8c3af4ce4f87dedd10fbee4f4608 *R/concat.R
ff7402e930eaa458e1570b1eee77625d *R/cond_logLik.R
4b73d540b46cc48a1894baf3e546d7b1 *R/continue.R
f8867624ab320a1ca530aa7d104881a5 *R/covariate_table.R
3bc8f8ffc8e4165a802782ad37b471bf *R/covmat.R
d752903c705d87feb07d7bf023978e7c *R/csnippet.R
04e5dc33fa5b31ade55113e5d6558e22 *R/dacca.R
639f4fb28dfd812f2fc827aa611a87ec *R/design.R
3c824e41551187ae643f4f0ecd3b29d0 *R/dinit_spec.R
9a33b1eac9c0faad26483125fb5e331b *R/dmeasure_spec.R
1bea14f331d44d72fd3567a892e0d893 *R/dprocess_spec.R
9b8685bef45fbd4c5ea70e81c8a58079 *R/ebola.R
db4c6e84f35ef215f692e8ecc17b5645 *R/eff_sample_size.R
8da8c414574cb8072d1f39a163ccc47e *R/elementary_algorithms.R
6deb6654e855dc150bd03a58c1fc9416 *R/emeasure_spec.R
0c5d8fc35def4a1acc4dc27ab54a4458 *R/estimation_algorithms.R
8fbf2861cb49479588f408c5f564fb9f *R/eulermultinom.R
206b859ec2f3cb6755cbdaedebce9fe8 *R/extract.R
50bee5e300a38a4f6bde3b94a0702466 *R/filter_mean.R
bd6a9b9d6244104e3eca2f425b4d46f0 *R/filter_traj.R
9deb05a123af7bb2baec6fd7e6bb5f28 *R/flow.R
6c93fad75f55769019cfb4fd7c0f7e64 *R/forecast.R
2846cda6c4f1437f4aebde57e53c6530 *R/gompertz.R
f39038610ce826b30745bc70f225f6b2 *R/kalman.R
59839781611539c38de9f20d05bf38bb *R/kf.R
6b0c071377dcf8ea3c115204646480b5 *R/listie.R
1bb879d4ba35f6981a23ad1028292541 *R/load.R
f6fe5d878624eb26a1d2e908dff3b048 *R/loglik.R
bd56343d20ce9b42686759e9b651ade9 *R/logmeanexp.R
563e6dd56d13d9101258500c922094cb *R/lookup.R
e49fe403e98fd2ea9980038dcd5c2788 *R/mcap.R
4471d34a29fd01739b880c020ae21d68 *R/melt.R
3118dd363198bc908ed41daed70ee999 *R/mif2.R
454407d6768c71b456394d7a9d423435 *R/nlf.R
14b3b98e57eae6a5bface9dbcfe35d8b *R/objfun.R
9ada71ae3b78adb6493cc6208afa857c *R/obs.R
6815a4193d42c88c37081f63ec69e61c *R/ou2.R
42edd7b2df8f8429731fb5301de93a54 *R/package.R
d86d2c37e97b2281feaba000598dda56 *R/parameter_trans.R
6a36ee90be1623a9d5f65f66dd1db1ab *R/parmat.R
08e338bb775cf509f7268c45b7900b2c *R/parus.R
580fb19e2d41b1e5400757e8e8c6377c *R/pfilter.R
896e000382624092d1f73ef4ec15670f *R/plot.R
45650ee4cc516f5a0979a82e287c31b5 *R/pmcmc.R
174a3c817a46f753e5075caaca1052ee *R/pomp.R
dab4f0738dbcf9313530cda3ba0c62b4 *R/pomp_class.R
31ee40d2a4d8917f3f3f35fd7d0fff4c *R/pomp_examp.R
2dbaee4a6c9c9483c216d57c13ea268a *R/pomp_fun.R
571f769acc35c2e89bc6ee13596462d6 *R/pred_mean.R
f1e7a49c24c2ca2d58cbe995526270e0 *R/pred_var.R
df0959485eb78a4fe68e9ca1338dfd5b *R/print.R
4f39aa00dfc31a7af68e58fa60ca0929 *R/prior_spec.R
bd8667d115d6f209e6af8b4d93c7c13f *R/probe.R
8758c9e06aa0ed0a42d168bcd5a142a9 *R/probe_match.R
00d7d12ff3213e2dace77a5c502259f5 *R/profile_design.R
66755ca59d358b700f668589ce93c53e *R/proposals.R
f864587fe3777f6b9b35a1f65feff785 *R/pstop.R
fbf4e75ddaba91862fe13a2add0ec59c *R/resample.R
16e6f83b7c0a3d1c551b5884cd02d29c *R/ricker.R
ef0042515b34afe987a6a250fa0fbbcc *R/rinit_spec.R
80d92614b9252a543c48347ecdcfb8a3 *R/rmeasure_spec.R
cca8c9619dae1548acdad9206942324a *R/rprocess_spec.R
83d3f7778d4686332c4e4e3f15ad6310 *R/runif_design.R
e4c6444f612d6458595581116a74b7a8 *R/rw2.R
b1517f61ad704f608a03f5490c59ae47 *R/safecall.R
e32410fb81137b84cb1b7176029e7bdc *R/sannbox.R
1da7aa7a932ebad6066451f37bb451d0 *R/saved_states.R
e6ef5c06040182a358e2be6474aea942 *R/show.R
f20ffa1c07d5efd7ac53a4ba9e3426dd *R/simulate.R
8b6617f1371950101055f0c2727a7feb *R/sir.R
1904cbb09caeaebd4ee1cec2789b5d25 *R/skeleton_spec.R
210272baffba2896f72d9a7dd6d4f405 *R/slice_design.R
c99777bac3c84526613a698d9a54992a *R/sobol_design.R
418f38044238b4c62d6eec3c93d470a3 *R/spect.R
dd9ae2768f75b55f7ebea92e3ea764db *R/spect_match.R
e53e770d60de589412d11256523a859e *R/spy.R
6814611ab9c3ab71bba4bbd3e8394703 *R/states.R
da861b9e6e1a39f663f951fa16c18d00 *R/summary.R
b4615d07cb61b2544087eb6094d3cc1d *R/templates.R
ef005768c957e55f4e7f41b62ce2815d *R/time.R
a0abd6c4df829f764c3fdb32527d0724 *R/timezero.R
8cb2de88f8e3c66e12f7449f2d9955f0 *R/traces.R
f878159c472adde80dc5927cc61b5724 *R/traj_match.R
d8bf88799a47af94733a124316913c53 *R/trajectory.R
02b4ede7b07686b7837cf7e10a043b14 *R/transformations.R
03d0f43e130dd14c34e9b2a345db5af8 *R/undefined.R
24b2e00545190dcd8eb3d16edb734481 *R/userdata.R
1960316a20390bb6ca275d788a208693 *R/verhulst.R
d74c11f449f65238916f6922c3a8942c *R/vmeasure_spec.R
e844c4c432ac8d94802298ec8bfc81ca *R/window.R
1d60254c011cf8621704ab3b7401d43e *R/workhorses.R
e5f6e6954ef9412017d5975bacfdea81 *R/wpfilter.R
4c70dfa14ffaca0304db5509ce8372a8 *R/wquant.R
e135391164260a030e840f2bab53a299 *README.md
aa5e5a2cbfaea3d9b6cdbe378ac48cee *build/partial.rdb
c860b7dcb7c9fd6057a44819ced79894 *data/LondonYorke.rda
4665eb3edd8952544df3a67c4d1d2bba *data/blowflies.csv.xz
8004499352ed32ea4a3db1856fe5fe20 *data/bsflu.rda
2a1d5d066ba9991dafc3426980c84cb4 *data/ebolaWA2014.rda
f954fa32a894cc929afb30753eef0bdc *data/ewcitmeas.rda
8e2212e0896b5a115048281122662d77 *data/ewmeas.rda
0e0eda4824bc68535da32d9aa065fae7 *data/parus.csv.gz
b3467dd24936736bb5c8300c507a0f39 *inst/CITATION
d32239bcb673463ab874e80d47fae504 *inst/GPL
357f8ca60a07bc2a9a366b975d176813 *inst/NEWS
8c2644283c5d8c1ffca3c7712fc0795e *inst/NEWS.Rd
8f9c487a3ba59cb9b4738d1c626d630a *inst/doc/index.html
cde0fde8f8f20c9a8f417f3d7128e0ab *inst/include/pomp.h
1e4cd0d771a671b5bfba81f6f1946f0e *inst/include/pomp_defines.h
6e7af9d711b09d841679cd9b8f7ea2aa *man/abc.Rd
50ecbf6a80b3b11b3afe3dc01991f339 *man/accumvars.Rd
9f08db5c6ce2a47919f1a16bf2fd8aba *man/as_data_frame.Rd
9fb528e7af70e75a272b51ec561e8af5 *man/as_pomp.Rd
5b7c63e6fe7f0c30ff5da7013a912220 *man/bake.Rd
e56881730061ad446adfd94e447871e8 *man/basic_components.Rd
23170bde76496e19724226bd1df198cf *man/basic_probes.Rd
d23106155f95afd7ef10340abadcb4cd *man/betabinom.Rd
cf7a3023b5890b0bcf8207269ac30ee4 *man/blowflies.Rd
5ac0a86135ebb1191369f39cca7de22d *man/bsflu.Rd
cea3c3fffeec63969a35ec6c5048fd4a *man/bsmc2.Rd
8652c7533b2bcc912417a3d448f32764 *man/bsplines.Rd
78b577a289670d7f687a734c1f0fa0ef *man/childhood.Rd
bc30ac21d3ed53b6ee1e5acbd38b81c4 *man/coef.Rd
fb40e04c620dcafc9f4c9ce2aed10beb *man/conc.Rd
95320c62aadb1a7b1eb72b1524db5e7d *man/concat.Rd
6fc6272711250b4237851262bcea9271 *man/cond_logLik.Rd
8ce206152e1292fe94dd8551c522fdc6 *man/continue.Rd
a4661ac664ecfc576997bf5bd7cc827b *man/covariate_table.Rd
6327efaf55e81adbcddbc1b6b30b146e *man/covmat.Rd
64d5d98e2042f06fe256f2327b0eda93 *man/csnippet.Rd
a2de9fcb9b8f15f9f3965ad56101c0d4 *man/dacca.Rd
00cebf9775d65b129bfeafd47556b24b *man/design.Rd
4e70d846fa5bb9b97bceacd96c771837 *man/dinit.Rd
59d824dadb65af48af96d17ce71a4bd2 *man/dinit_spec.Rd
ad9ebf4c63223e5327bc4806c248543f *man/dmeasure.Rd
548f6cefbf23f0ede22ad09984dc6e50 *man/dmeasure_spec.Rd
bc8bbc976a310d9b418c1d85dfc4caac *man/dprior.Rd
f877237606a06153f27e7879c36e85e2 *man/dprocess.Rd
9bc85a5e3028b15214bdc0c1f02419d4 *man/dprocess_spec.Rd
a5993ccf058b04a2ecab7b91cb7a42c1 *man/ebola.Rd
377232057c47401f2b0422fc15dcec6f *man/eff_sample_size.Rd
6859dcc3788e6686a5a4f77a102f73d9 *man/elementary_algorithms.Rd
4532c0be94c5dc7615fabf0e25f2a7bb *man/emeasure.Rd
bdeeea7c4db76e38aa0028a1a9ca222f *man/emeasure_spec.Rd
1235f1827cf3936e60c415f3fc501d5b *man/estimation_algorithms.Rd
d38be848829c0e6f66197652648c17f0 *man/eulermultinom.Rd
544499a44974eeb9f6a39cb8d2091b89 *man/filter_mean.Rd
66eecb05fed2c1152225152c9e2951e9 *man/filter_traj.Rd
df96b77f5ceba49a0be31e153a3c44e2 *man/flow.Rd
9e01381d92d41764f4e53bf5892d368d *man/forecast.Rd
1f1d1bd49032f72f7c9f54e137b5ae2b *man/gompertz.Rd
54fd771864e46342a78a1fa996c18709 *man/hitch.Rd
99810ed50cf6190b8b469bd7333d4dc2 *man/kalman.Rd
c8573bf473768bf0a8f7459f578858e7 *man/kf.Rd
717d7ff80e237c597be1d77a1d4c6589 *man/listie.Rd
293e8f4c8c73c4a7ca6709d33bc187d1 *man/load.Rd
d9d42db10921a6f4e9d12f7bac3d71ff *man/loglik.Rd
dc6c9c16cdbd4dafca0bdcc63534130a *man/logmeanexp.Rd
eb975cd40810013c77835c4b23af90db *man/lookup.Rd
106c24c88bd59d342b6058d5c774c0d6 *man/macros/citations.Rd
9421517a3f4e68bdffe2659f06a7ef16 *man/mcap.Rd
5c25020c3fcbda52f565099c30f523b4 *man/melt.Rd
ca4dfe53499d2df28e42f0224e8ffd7e *man/mif2.Rd
ae8eacd3d820d85eb84f98590336a775 *man/nlf.Rd
582721c556f3c6a05014ee173fa56d95 *man/objfun.Rd
a64d44691a7b96117391f6e0a394f191 *man/obs.Rd
6385db838caf94be046c8946c263e62d *man/ou2.Rd
3a867d707b91891b2442c8d4939a9534 *man/pStop.Rd
8cf1cab28cc5eadb9c301cebe78aa001 *man/parameter_trans.Rd
b5179b319c389fa4578a9caff3657f8e *man/parmat.Rd
71cb2b2b91c0c5c5666185284181165a *man/partrans.Rd
45bb2aacd2a26319390b4a81f45ba9d7 *man/parus.Rd
704294ca268c1fac8e94ea2bfdbcee61 *man/pfilter.Rd
7a15ccec5f968e005141d8c59e90146f *man/plot.Rd
3aa834f0b155298dee2f3cdfa7fca507 *man/pmcmc.Rd
96d86d9509a45d1514618e9e6765fd6d *man/pomp-package.Rd
8e211cf16c90aeee816ce9a8b18becc4 *man/pomp.Rd
5ae46356ad061e42538e8f72f79c3011 *man/pomp_class.Rd
0f0ca4d99fdc7f14aaca4c8b075f9a14 *man/pomp_examp.Rd
99c73660998cc5f2994c5345b383a842 *man/pomp_fun.Rd
e5cc9f2f9c80d951f4901ea3f2aef17f *man/pred_mean.Rd
5d60fa8626f928c8f04c283278754069 *man/pred_var.Rd
b16bc18bec634174729c5d9805776236 *man/print.Rd
c863ed4062a94094c72545240efa167c *man/prior_spec.Rd
402cd2a3cd81b95b82c47da0980ddf45 *man/probe.Rd
59111df89075aafc1f51fe9d70555200 *man/probe_match.Rd
975f999aa7bab726bae8d0ef154b49ff *man/proposals.Rd
523380e307fff1a0c534b47a53dd04f0 *man/resample.Rd
9f0fe0c72847754a310882514d9f83b3 *man/ricker.Rd
ee5bb2671b582ce5fcb2cfbe59407f22 *man/rinit.Rd
7480ddc6a961f5379263dabb290610a0 *man/rinit_spec.Rd
bba615b8e9d5c3e56e8f2bbca4a07863 *man/rmeasure.Rd
bf445e0e86bce8901ea3064d30e16fd1 *man/rmeasure_spec.Rd
fc579b4734c45f186e3c0946853fcac7 *man/rprior.Rd
ff5f774b4ecde6859e603ac83bd30c4f *man/rprocess.Rd
7691853beb66fd6486252dd46d00283c *man/rprocess_spec.Rd
737725642b865493e146941453141de3 *man/rw2.Rd
23e9e9c62c1e28cbe04e4cbef6b6bdcd *man/rw_sd.Rd
5267b21cf000211fda1ca935fe44f1f6 *man/sannbox.Rd
9aee4bc4d78ba9982421e1d599ba098a *man/saved_states.Rd
07d77eeebedae644baf9006f5704fde7 *man/show.Rd
7f7faf38a9269ea89b7635a460d079c8 *man/simulate.Rd
77912752912046ce75ce143f49142712 *man/sir.Rd
d625057c8aa4836ffcd1f9e8d06a5c78 *man/skeleton.Rd
454faa10c857b131f24af7cc06ffea9a *man/skeleton_spec.Rd
1c7ec253976d8de8b84a0c99a848a839 *man/spect.Rd
bd2054b7746e3045df8588181b77f920 *man/spect_match.Rd
f34a83da2c06cddb9d21e9c05b62b9fe *man/spy.Rd
57b37aabe4434734973441c74dde9486 *man/states.Rd
dd05337e23409989e8c8b4306b10bab4 *man/summary.Rd
6d233bfc52817a92af2a5aaf7a57e654 *man/time.Rd
bac4f6c63a1a800e18d570f21711be16 *man/timezero.Rd
a10f96e8dfbba94240c77c63897de195 *man/traces.Rd
b18356b1b4a6f36cdd4dd39713157532 *man/traj_match.Rd
2d7955c2d5f274611885362e8f283323 *man/trajectory.Rd
962afdb0317275154a4916ed18b1bf4e *man/transformations.Rd
b3f011862bca4c1b497d2accb98c770b *man/undefined.Rd
01730c32fced157b4e1ca234972fc1df *man/userdata.Rd
8362d006fc2c64269cc99a64eef5a36d *man/verhulst.Rd
4b3ad57aa1f20908b46625148c5db299 *man/vmeasure.Rd
424d060895c264f0344e71512fa53ca3 *man/vmeasure_spec.Rd
e715565227b8ff3faa88a6fde060c8ba *man/window.Rd
0200065ddb874165e07200919cea9ae8 *man/workhorses.Rd
6df952cb1d3f0070b9d0155ded7e3db6 *man/wpfilter.Rd
a4156cee4aa86f2a19cbef385ef8dc14 *man/wquant.Rd
2a6f9e9e044a78154d3cfda5936d6f48 *src/Makevars
c7afccf8ee115809e3d8454368647223 *src/bspline.c
6ccacb5c6a2796ed6891edcf9687981d *src/decls.h
47cefb2c5a9cbf93c25a40c94555f3bf *src/dinit.c
0a6a2142d062a20a835adef5d60ee2cd *src/distributions.c
36f84cab5789a35b22c23502fecbbe0b *src/dmeasure.c
6738460af39f9ff77a294d27fdd4b5d7 *src/dprior.c
c36817fbb2b270973360a251b4f42865 *src/dprocess.c
1f48ca5e228ead9970ab0c426e828345 *src/emeasure.c
ab831fd08e0b286bb6429fe8ba2bcb4a *src/euler.c
bacc44bb4acc7a242f2363a8b215aa0d *src/gompertz.c
e2d39a1dc1459c52dab32dd5f377a366 *src/init.c
1d6cd1c0e22e3ffa15c415dffe79d6dc *src/internal.h
4b34aa5336cd84ad9c03dca11fcfffd6 *src/logmeanexp.c
eca2d1bee73729509b361fe785ee0a3f *src/lookup_table.c
b747d8c64f5c3ad6c5e676d5ea1ba52f *src/mif2.c
27e711fe98e1de0c7b0f87bb38af424e *src/ou2.c
00bf151c9794e3e804a89938221a5d8b *src/partrans.c
f93d39755346e1cfcd4ded5a321de660 *src/pfilter.c
65f56637560feda533f81c1b5c5ea218 *src/pomp.h
1e4cd0d771a671b5bfba81f6f1946f0e *src/pomp_defines.h
3ef04240df81237bb5a80b6b74cac65f *src/pomp_fun.c
207c315a85148ae71bc194ca4832a0e9 *src/pomp_mat.h
4b3ea460ad2fffbc59c5cca16a2beceb *src/probe.c
e7a6d1c52a1214a00308a1c6104319ea *src/probe_acf.c
81e5f01590d18a0884fa0582e9867616 *src/probe_marginal.c
19a17e08ca58f82c8e46319ff9eef80b *src/probe_nlar.c
aedc6518b0a0bc1d89aa785fc778b3b0 *src/resample.c
e6d94217b0f6c2e9caba637db06593dd *src/rinit.c
40b73f89c2e662dcacece0428d9e5e12 *src/rmeasure.c
d658a9b6f410a88ab1d2293614f5f709 *src/rprior.c
ae38dfd813c0f858ce41d1454e5d7fcc *src/rprocess.c
da6446a38bc0c8009fa11c9733d24d6c *src/simulate.c
fe3319fdb5adbf1f3741f0d67aac286b *src/skeleton.c
f59dd0059cdd443a58c43bf2755f66e5 *src/soboldata.h
a579079ce932aae31c893e25ce5aa4f4 *src/sobolseq.c
b61608871d72814f0630065700e2da95 *src/ssa.c
6549ed53d24a9fbb89d11d410c31b2eb *src/synth_lik.c
f6dc8c641c8e675d11f7836954391702 *src/trajectory.c
f06c799ac06b81f8cfc55115ec895087 *src/transformations.c
7c4468db9a21a9105eb8ccda843f0fb1 *src/userdata.c
82c9ece09dcebbedee85a71618b26301 *src/vmeasure.c
083f4a7e4453fa20dfe58dd3a3e1d343 *src/wpfilter.c
