51223765d2452d446b4b3e2f402b888d *DESCRIPTION
b706e91fccc327231c34c3996906630d *NAMESPACE
0856260166669e814dd195449d40b7f9 *R/abc.R
290505ed00e8da021f6978923db3c8e3 *R/accumulators.R
f631c0b055cd77901154c1d136aff661 *R/as_data_frame.R
cb687fab11bfce9f1a2d726c243d5b92 *R/as_pomp.R
031733e115edd4569950461819d2e199 *R/bake.R
a3dac97d88a9ee0f69afe9419d60dde4 *R/basic_components.R
6f586885dc2c9d9dd013abdba19b0192 *R/basic_probes.R
52e905355299bbe2e6b7cb0c3f645c4c *R/betabinom.R
b6f09f68592557a004deb8d82ed0868c *R/blowflies.R
de61cf8adc5627bb26930a8db277ea2b *R/bsflu.R
fb4ec7140b7ddb91d406e6a6368c1cfd *R/bsmc2.R
cf965a97a1e8b65e15461f40e939b3f9 *R/bsplines.R
cdd887c3f2548eb8310f530f6fc456e6 *R/builder.R
77623e33b7fd8e9b03cb634e64449d7f *R/childhood.R
70dd985d9529795fd8729c424a7acc35 *R/coef.R
66b8986bffc87f9df996180239e34acc *R/conc.R
e0052f3da5eafb042752ecf54a313751 *R/concat.R
ff7402e930eaa458e1570b1eee77625d *R/cond_logLik.R
4b73d540b46cc48a1894baf3e546d7b1 *R/continue.R
e0345fadba170c204422514321c7f69b *R/covariate_table.R
3bc8f8ffc8e4165a802782ad37b471bf *R/covmat.R
db6b0f565c2d9a1341e8b71f6facd835 *R/csnippet.R
cc844c61a77e374c16c2e6f67b5231f8 *R/dacca.R
151821a92c0b966245c15c2f7efc0631 *R/design.R
3c824e41551187ae643f4f0ecd3b29d0 *R/dinit_spec.R
9a33b1eac9c0faad26483125fb5e331b *R/dmeasure_spec.R
1bea14f331d44d72fd3567a892e0d893 *R/dprocess_spec.R
19ae5c7b06bbf654687ba451368452ae *R/ebola.R
fd2cdab0e115cc73d0d4022aee91896b *R/eff_sample_size.R
99df1e369ce81ba8c5377aecc12e6005 *R/elementary_algorithms.R
6deb6654e855dc150bd03a58c1fc9416 *R/emeasure_spec.R
0aac83f9b27639ba595bca337dffd849 *R/estimation_algorithms.R
8fbf2861cb49479588f408c5f564fb9f *R/eulermultinom.R
206b859ec2f3cb6755cbdaedebce9fe8 *R/extract.R
50bee5e300a38a4f6bde3b94a0702466 *R/filter_mean.R
cbe2bcd0b76ceada8bcdec415c3dfa65 *R/filter_traj.R
f93d7ca75c89a9ca7175430bcb9b59c8 *R/flow.R
6c93fad75f55769019cfb4fd7c0f7e64 *R/forecast.R
2846cda6c4f1437f4aebde57e53c6530 *R/gompertz.R
258f3a5c408f6093adf014962c49ca48 *R/kalman.R
cdbc742aa23b49cbece9d726f575079f *R/kf.R
6b0c071377dcf8ea3c115204646480b5 *R/listie.R
1bb879d4ba35f6981a23ad1028292541 *R/load.R
f6fe5d878624eb26a1d2e908dff3b048 *R/loglik.R
88df03c6e97e7d6533437ced12e64eb3 *R/logmeanexp.R
563e6dd56d13d9101258500c922094cb *R/lookup.R
6731995d244103c5c993164995759393 *R/mcap.R
4471d34a29fd01739b880c020ae21d68 *R/melt.R
d8f805dd0c7e70773db4ef403ac55276 *R/mif2.R
94db52aefd747a0ae19c150c3b8eaf67 *R/nlf.R
c14257f1531e663cf67157abb4ecb06a *R/objfun.R
9ada71ae3b78adb6493cc6208afa857c *R/obs.R
6815a4193d42c88c37081f63ec69e61c *R/ou2.R
720a850e5884e1e0e628e6aa6acf57e1 *R/package.R
43d6ca73250b2581b94f3e50aa603e45 *R/parameter_trans.R
1627bf59281ff7d103c742e283927518 *R/parmat.R
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16285b365efe1469ebea03fa5b58b43d *R/pfilter.R
896e000382624092d1f73ef4ec15670f *R/plot.R
89e2be68f3d4ab0fc9f60ea9a3daf9cd *R/pmcmc.R
174a3c817a46f753e5075caaca1052ee *R/pomp.R
dab4f0738dbcf9313530cda3ba0c62b4 *R/pomp_class.R
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2dbaee4a6c9c9483c216d57c13ea268a *R/pomp_fun.R
571f769acc35c2e89bc6ee13596462d6 *R/pred_mean.R
f1e7a49c24c2ca2d58cbe995526270e0 *R/pred_var.R
df0959485eb78a4fe68e9ca1338dfd5b *R/print.R
4f39aa00dfc31a7af68e58fa60ca0929 *R/prior_spec.R
95e63094b0b2e484e7eeacbb25f1b0cd *R/probe.R
3df7469caebdd72b0e1e5d5028eff3ca *R/probe_match.R
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6dd6187bd88729648f65496ac3661c1d *R/proposals.R
f864587fe3777f6b9b35a1f65feff785 *R/pstop.R
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16e6f83b7c0a3d1c551b5884cd02d29c *R/ricker.R
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80d92614b9252a543c48347ecdcfb8a3 *R/rmeasure_spec.R
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83d3f7778d4686332c4e4e3f15ad6310 *R/runif_design.R
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1d237d0149a9ed1b5e6174aa9529cc6e *R/saved_states.R
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f20ffa1c07d5efd7ac53a4ba9e3426dd *R/simulate.R
2f4d709d8be57daca8d3b09969361365 *R/sir.R
73a1686fa1d3e1a126f8345c50d3f63c *R/skeleton_spec.R
e2bde27dbc8be074efda5cda31baeff8 *R/slice_design.R
cdadd3af9cc7bd7f8b0046f55c94e35c *R/sobol_design.R
e78931e1cedd0f17b4ce4e969b79dc96 *R/spect.R
0cdb1754aeb1eb8698b63bc0addba50b *R/spect_match.R
cfe3f24bf84ce8bba8b8835517b7a521 *R/spy.R
6814611ab9c3ab71bba4bbd3e8394703 *R/states.R
da861b9e6e1a39f663f951fa16c18d00 *R/summary.R
bf1b1cb365f59229c4be2ae480cf1619 *R/templates.R
ef005768c957e55f4e7f41b62ce2815d *R/time.R
a0abd6c4df829f764c3fdb32527d0724 *R/timezero.R
8cb2de88f8e3c66e12f7449f2d9955f0 *R/traces.R
aacef489f9fdde9a762d3076ed658ff8 *R/traj_match.R
a6867419dc0ef13d0a7b5a254f7ee504 *R/trajectory.R
02b4ede7b07686b7837cf7e10a043b14 *R/transformations.R
03d0f43e130dd14c34e9b2a345db5af8 *R/undefined.R
74d312448130b93e77be7df371174f76 *R/userdata.R
1960316a20390bb6ca275d788a208693 *R/verhulst.R
d74c11f449f65238916f6922c3a8942c *R/vmeasure_spec.R
c5b0d9eec73ad7af7bc3d4001f179427 *R/window.R
c868a578dd7f1e59384ffabf990bc095 *R/workhorses.R
fb7e6f0ab29733a0deff9a1cba21b9d2 *R/wpfilter.R
4c70dfa14ffaca0304db5509ce8372a8 *R/wquant.R
048321d21a0134841e51c16a89bf5b39 *README.md
f61db891eb928123aba4412ca322f508 *build/partial.rdb
0a71b1057fd59951fa104129e0e85012 *data/LondonYorke.rda
4665eb3edd8952544df3a67c4d1d2bba *data/blowflies.csv.xz
0a8f5f8969ebb806dec67694b651ce0a *data/bsflu.rda
dfc7174b12bfbe3c3447f1c3a2880de4 *data/ebolaWA2014.rda
8ac92f17959f0f8c2e2da9d28c35cb3f *data/ewcitmeas.rda
1d19bbdc09d99478fd300dd2dab8ce1b *data/ewmeas.rda
0e0eda4824bc68535da32d9aa065fae7 *data/parus.csv.gz
b3467dd24936736bb5c8300c507a0f39 *inst/CITATION
d32239bcb673463ab874e80d47fae504 *inst/GPL
c3da230e7498739f88e0a68b9592e2b9 *inst/NEWS
3dfcabd449205f4476e749426592baf7 *inst/NEWS.Rd
8f9c487a3ba59cb9b4738d1c626d630a *inst/doc/index.html
cde0fde8f8f20c9a8f417f3d7128e0ab *inst/include/pomp.h
1e4cd0d771a671b5bfba81f6f1946f0e *inst/include/pomp_defines.h
6e7af9d711b09d841679cd9b8f7ea2aa *man/abc.Rd
50ecbf6a80b3b11b3afe3dc01991f339 *man/accumvars.Rd
9f08db5c6ce2a47919f1a16bf2fd8aba *man/as_data_frame.Rd
9fb528e7af70e75a272b51ec561e8af5 *man/as_pomp.Rd
5b7c63e6fe7f0c30ff5da7013a912220 *man/bake.Rd
e56881730061ad446adfd94e447871e8 *man/basic_components.Rd
23170bde76496e19724226bd1df198cf *man/basic_probes.Rd
d23106155f95afd7ef10340abadcb4cd *man/betabinom.Rd
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5ac0a86135ebb1191369f39cca7de22d *man/bsflu.Rd
cea3c3fffeec63969a35ec6c5048fd4a *man/bsmc2.Rd
60f8e1d2e1512c75299221b39b0ad40f *man/bsplines.Rd
78b577a289670d7f687a734c1f0fa0ef *man/childhood.Rd
bc30ac21d3ed53b6ee1e5acbd38b81c4 *man/coef.Rd
fb40e04c620dcafc9f4c9ce2aed10beb *man/conc.Rd
95320c62aadb1a7b1eb72b1524db5e7d *man/concat.Rd
6fc6272711250b4237851262bcea9271 *man/cond_logLik.Rd
8ce206152e1292fe94dd8551c522fdc6 *man/continue.Rd
a4661ac664ecfc576997bf5bd7cc827b *man/covariate_table.Rd
6327efaf55e81adbcddbc1b6b30b146e *man/covmat.Rd
64d5d98e2042f06fe256f2327b0eda93 *man/csnippet.Rd
a2de9fcb9b8f15f9f3965ad56101c0d4 *man/dacca.Rd
00cebf9775d65b129bfeafd47556b24b *man/design.Rd
4e70d846fa5bb9b97bceacd96c771837 *man/dinit.Rd
59d824dadb65af48af96d17ce71a4bd2 *man/dinit_spec.Rd
ad9ebf4c63223e5327bc4806c248543f *man/dmeasure.Rd
548f6cefbf23f0ede22ad09984dc6e50 *man/dmeasure_spec.Rd
bc8bbc976a310d9b418c1d85dfc4caac *man/dprior.Rd
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9bc85a5e3028b15214bdc0c1f02419d4 *man/dprocess_spec.Rd
a5993ccf058b04a2ecab7b91cb7a42c1 *man/ebola.Rd
377232057c47401f2b0422fc15dcec6f *man/eff_sample_size.Rd
6859dcc3788e6686a5a4f77a102f73d9 *man/elementary_algorithms.Rd
4532c0be94c5dc7615fabf0e25f2a7bb *man/emeasure.Rd
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1235f1827cf3936e60c415f3fc501d5b *man/estimation_algorithms.Rd
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544499a44974eeb9f6a39cb8d2091b89 *man/filter_mean.Rd
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df96b77f5ceba49a0be31e153a3c44e2 *man/flow.Rd
9e01381d92d41764f4e53bf5892d368d *man/forecast.Rd
1f1d1bd49032f72f7c9f54e137b5ae2b *man/gompertz.Rd
54fd771864e46342a78a1fa996c18709 *man/hitch.Rd
99810ed50cf6190b8b469bd7333d4dc2 *man/kalman.Rd
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717d7ff80e237c597be1d77a1d4c6589 *man/listie.Rd
293e8f4c8c73c4a7ca6709d33bc187d1 *man/load.Rd
d9d42db10921a6f4e9d12f7bac3d71ff *man/loglik.Rd
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eb975cd40810013c77835c4b23af90db *man/lookup.Rd
0f3d9e97bf157cc08e4992d92ea28963 *man/macros/citations.Rd
647020a9bdd3bbdf4d4300bdad61a377 *man/mcap.Rd
5c25020c3fcbda52f565099c30f523b4 *man/melt.Rd
ca4dfe53499d2df28e42f0224e8ffd7e *man/mif2.Rd
ae8eacd3d820d85eb84f98590336a775 *man/nlf.Rd
582721c556f3c6a05014ee173fa56d95 *man/objfun.Rd
a64d44691a7b96117391f6e0a394f191 *man/obs.Rd
6385db838caf94be046c8946c263e62d *man/ou2.Rd
3a867d707b91891b2442c8d4939a9534 *man/pStop.Rd
8cf1cab28cc5eadb9c301cebe78aa001 *man/parameter_trans.Rd
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45bb2aacd2a26319390b4a81f45ba9d7 *man/parus.Rd
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7a15ccec5f968e005141d8c59e90146f *man/plot.Rd
3aa834f0b155298dee2f3cdfa7fca507 *man/pmcmc.Rd
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8e211cf16c90aeee816ce9a8b18becc4 *man/pomp.Rd
5ae46356ad061e42538e8f72f79c3011 *man/pomp_class.Rd
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4a2b4e79f1ca0626e0d80ed5f361c1eb *man/probe_match.Rd
975f999aa7bab726bae8d0ef154b49ff *man/proposals.Rd
523380e307fff1a0c534b47a53dd04f0 *man/resample.Rd
9f0fe0c72847754a310882514d9f83b3 *man/ricker.Rd
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ff5f774b4ecde6859e603ac83bd30c4f *man/rprocess.Rd
0bf25c56e752a9b2947e6c61938d3abc *man/rprocess_spec.Rd
737725642b865493e146941453141de3 *man/rw2.Rd
23e9e9c62c1e28cbe04e4cbef6b6bdcd *man/rw_sd.Rd
5267b21cf000211fda1ca935fe44f1f6 *man/sannbox.Rd
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7f7faf38a9269ea89b7635a460d079c8 *man/simulate.Rd
77912752912046ce75ce143f49142712 *man/sir.Rd
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454faa10c857b131f24af7cc06ffea9a *man/skeleton_spec.Rd
1c7ec253976d8de8b84a0c99a848a839 *man/spect.Rd
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4b3ad57aa1f20908b46625148c5db299 *man/vmeasure.Rd
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0200065ddb874165e07200919cea9ae8 *man/workhorses.Rd
6df952cb1d3f0070b9d0155ded7e3db6 *man/wpfilter.Rd
a4156cee4aa86f2a19cbef385ef8dc14 *man/wquant.Rd
2a6f9e9e044a78154d3cfda5936d6f48 *src/Makevars
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6738460af39f9ff77a294d27fdd4b5d7 *src/dprior.c
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1f48ca5e228ead9970ab0c426e828345 *src/emeasure.c
624567a17e1671df826b58d01fc29245 *src/euler.c
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e2d39a1dc1459c52dab32dd5f377a366 *src/init.c
1d6cd1c0e22e3ffa15c415dffe79d6dc *src/internal.h
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eca2d1bee73729509b361fe785ee0a3f *src/lookup_table.c
b747d8c64f5c3ad6c5e676d5ea1ba52f *src/mif2.c
27e711fe98e1de0c7b0f87bb38af424e *src/ou2.c
00bf151c9794e3e804a89938221a5d8b *src/partrans.c
f93d39755346e1cfcd4ded5a321de660 *src/pfilter.c
65f56637560feda533f81c1b5c5ea218 *src/pomp.h
1e4cd0d771a671b5bfba81f6f1946f0e *src/pomp_defines.h
3ef04240df81237bb5a80b6b74cac65f *src/pomp_fun.c
207c315a85148ae71bc194ca4832a0e9 *src/pomp_mat.h
4b3ea460ad2fffbc59c5cca16a2beceb *src/probe.c
e7a6d1c52a1214a00308a1c6104319ea *src/probe_acf.c
15866e419e78632bd8c46d54f4e8caec *src/probe_marginal.c
19a17e08ca58f82c8e46319ff9eef80b *src/probe_nlar.c
aedc6518b0a0bc1d89aa785fc778b3b0 *src/resample.c
e6d94217b0f6c2e9caba637db06593dd *src/rinit.c
40b73f89c2e662dcacece0428d9e5e12 *src/rmeasure.c
d658a9b6f410a88ab1d2293614f5f709 *src/rprior.c
303944ad8ee030f87f3fe3df6ebb1c3d *src/rprocess.c
da6446a38bc0c8009fa11c9733d24d6c *src/simulate.c
fe3319fdb5adbf1f3741f0d67aac286b *src/skeleton.c
f59dd0059cdd443a58c43bf2755f66e5 *src/soboldata.h
a579079ce932aae31c893e25ce5aa4f4 *src/sobolseq.c
b61608871d72814f0630065700e2da95 *src/ssa.c
ac8000310c9713fb9729590279ae9001 *src/synth_lik.c
b32624ba310fd74f65c6ee8613167256 *src/trajectory.c
f06c799ac06b81f8cfc55115ec895087 *src/transformations.c
7c4468db9a21a9105eb8ccda843f0fb1 *src/userdata.c
82c9ece09dcebbedee85a71618b26301 *src/vmeasure.c
083f4a7e4453fa20dfe58dd3a3e1d343 *src/wpfilter.c
