050635019d6ee29797a9e3981070711f *DESCRIPTION
12c20a9b1cbc8faf3b0d88ae75d7af18 *NAMESPACE
04439352a8d794874ae3f242c77ce03b *NEWS
24a7a043b7d0adadd1977c560e301f03 *R/Index_calculations.r
2151d9b00d3e614354d9dacb3a890893 *R/amova.r
a8488d5e27b33ee8294b6600894e014d *R/bruvo.r
00598b4c173cf6b0f86ce9e852560d0a *R/classes.r
0ae697b12d4f9019fef0bb32280b83e6 *R/data_subset.r
cbd8478b82f4aa2522744482e248a784 *R/distances.r
33b77caf1152d453d14659ac7c40ea54 *R/file_handling.r
96c0f40e6a20ddf7324b2a1258f0c4ca *R/internal.r
261277045ec14cca7fc7837b28558b77 *R/messages.r
5666ab94f177846208ec8f62a35fe8e7 *R/methods.r
17ae77f537c48581de1ef44874498b25 *R/mlg.r
2097d20e428917c80582c0f72566ef1c *R/poppr.R
cf63b50918165380e53df6724959a95c *R/print_methods.r
b19859acf87966227c84baa5e91612e4 *R/sample_schemes.r
7f934faaf15bf11af33be8ccdc7be5eb *R/sandbox.r
c8ec780376f75b132f15574c7cfe8648 *R/visualizations.r
21cc627c111d555174cb87ddeabbd948 *R/zzz.r
cf69bb1fde07b8dd45871aaf3d64a72c *README.md
daa5625f09f0111377fd2b8fc7fb115f *build/vignette.rds
60b05880272e77d70ec9beec7ea9c3a5 *data/Aeut.rda
767ac19eb3bbb683c1c81ab301d2f459 *data/Pinf.rda
9a4c1c58c74cc5961eee2e268f112377 *data/monpop.rda
e91bdd5a30142cbad082f446bfa93f7d *data/partial_clone.rda
597535c162074c30d9e6207edab3ae73 *inst/CITATION
7c0774a8c59728851d7d1a3ba5e128e7 *inst/doc/algo.R
c6d0bd7beeada4c3b8e6b80c97c8dcff *inst/doc/algo.Rnw
02344e3b065e9bd776c86420171544e8 *inst/doc/algo.pdf
c50064676ef585e4d699cff9f3df6f6d *inst/doc/poppr_manual.R
f515c0917619242d95ae4ca1a434a316 *inst/doc/poppr_manual.Rnw
50e4626e78179d9679b67c269a6501c6 *inst/doc/poppr_manual.pdf
2e1ba95b8537037a21ed3cb8d507f28d *inst/files/rootrot.csv
502952e55e2a1dff9eb742ac05282e12 *inst/files/rootrot2.csv
ba2b4146131f64837c485ce100bbdbf1 *inst/files/simulated.dat
295a3e603e6e4401339e2f1a34e0694a *man/Aeut.Rd
1961cc57040aff5e2332a99fa155cab4 *man/Pinf.Rd
ede9814c70f77328a5e4469451349f16 *man/aboot.Rd
91403625b3f22def78fc2c5337e1c7c5 *man/bootgen-class.Rd
9b69bb36f2a34b8e3b130b6b97a64407 *man/bootgen-methods.Rd
0960b8ed92dd907304d4bf3df9a0ce96 *man/bruvo.boot.Rd
1bd715fc06f671ed6a5d5c181531297c *man/bruvo.dist.Rd
53fc4b8cf5889316cd678d2f5fa5d5bc *man/bruvo.msn.Rd
677a2bcd2019cc47c08f31186800bcfa *man/bruvomat-class.Rd
e1f95d50108109c5b9d2f1206adf0712 *man/bruvomat-methods.Rd
a8b9fb2ae6498923951a0e0e28acf3a8 *man/clonecorrect.Rd
27c443920d5737733f608a2ef864bff1 *man/coercion-methods.Rd
a3b9f7b9ba860248b228901a50dae9d5 *man/diss.dist.Rd
e1f9023cb81ed18f7ecc2ba1de4769e9 *man/genclone-class.Rd
21077b2acaef9379345cf6d47b7342fe *man/genclone-method.Rd
d5892f3da1dde61e384ab441c0a05a72 *man/genetic_distance.Rd
4c1a1d856ace39666af0c827afd229f2 *man/genind2genalex.Rd
f3adbcb22b91cdac578190ab19ca0b6a *man/genotype_curve.Rd
ad58f7bbdf34792abdbdc6c7106d0db2 *man/getfile.Rd
030a65117c5b84ac44867dc368b7a749 *man/greycurve.Rd
64763334a399b716fc48e608d6d76f8f *man/hierarchy-methods.Rd
b448e9d6f06865426b45ac820fbb024c *man/ia.Rd
b0103a631308b25845ee31339d775801 *man/info_table.Rd
05419c4c266f05ced1cb7a76dc01ae6c *man/informloci.Rd
a23ae56efc978f06fa88dfc48a7f1c43 *man/is.genclone.Rd
3818a023ca65ffd638285b89454f9f5a *man/locus_table.Rd
c39f54ab2f5333db3f7b13971e690cde *man/missingno.Rd
4f11dc4d911b1fb97ae1ae973a848db1 *man/mlg.Rd
d75104acdefb9f00e4b79996fb4c27aa *man/monpop.Rd
1d45f75832903b0a2a6e3662ba8f1990 *man/partial_clone.Rd
1f5b796aef813e431751011dcecdd5cf *man/plot_poppr_msn.Rd
85b26d8b7b9fa2c0d8ef86a1b97173a5 *man/poppr-package.Rd
969ca8d9066338ba4ee981c78a955243 *man/poppr.Rd
e15de3fde08d5ce619d217877b072b38 *man/poppr.all.Rd
d889c8cf040887dec8700a3dc8850e2b *man/poppr.amova.Rd
ac08d312497b7302a655f0d76c0275cf *man/poppr.msn.Rd
8660e5f8f0c4e09687965118767a5c63 *man/popsub.Rd
6cf5b5b2b920231c3320cc0576321d1c *man/population-methods.Rd
5fe09787feaad29836e5cee9c7e01f08 *man/private_alleles.Rd
67ae22942d94e670eea19cddf35c1de0 *man/read.genalex.Rd
4486b8474bc65e35d9cdaa3343a56bd9 *man/recode_polyploids.Rd
78397e1df9543a2a7b026a0bc6fe469f *man/shufflepop.Rd
c7571d9189d318b695271ee5f4fd5d45 *man/splitcombine.Rd
912b856c242dfe41c58acbb9b33ea9b7 *src/permut_shuffler.c
ccd58374637a92dd99629e6391e1e240 *src/poppr_distance.c
0a561f03a96806fcea2a55fb110f55a0 *tests/test-all.R
cc2240d0e8f38cc6aa110058dbab8936 *tests/testthat/test-amova.R
5d170e162ab00cf6ba2520c61619d13d *tests/testthat/test-colors.R
b723377fa17917fd2685ce2ba6906f56 *tests/testthat/test-distpop.R
78aaf873f8b21996439850bcef8f9f79 *tests/testthat/test-genclone.R
2bf50759890d560395a14c1803a64b3c *tests/testthat/test-greyscale.R
007668c41f1c84184db7d39d976089f3 *tests/testthat/test-import.R
48636221d0439e8b7acef96ec2904b6f *tests/testthat/test-missing.R
102682740d0c2f19a736b5c51efdaf9f *tests/testthat/test-mlg.R
59b35618c29b6ffc6c627e7933800442 *tests/testthat/test-polyploids.R
348150f258890e8d0c0dd0189091e4f3 *tests/testthat/test-poppr.R
b42f15ed661c86152c57b5d5bd19c863 *tests/testthat/test-popsub.R
60915d762af3d6d7de1419cadbf9c085 *tests/testthat/test-values.R
0bc5a2820a430b788446705cd69b6d73 *vignettes/algo-concordance.tex
c6d0bd7beeada4c3b8e6b80c97c8dcff *vignettes/algo.Rnw
7945cb85e09bec325c62ae56a0139e98 *vignettes/bruvo_upgma.png
96edc2720669416d1a5b05d5e6c27d3e *vignettes/getfile.pdf
96402ec4d48cc75e0e03ebf813560289 *vignettes/jalapeno-poppers.pdf
b3e8603f1fd9bbba61be2efa87a58f82 *vignettes/mod_dat.png
fb16fcda45a8ae6b20a619676b43d69f *vignettes/pnas.bst
3525990a30ea7252f3c7ddee1d7660b1 *vignettes/poppr_man.bib
0406131b735644f7115a0a0bc4bfd73e *vignettes/poppr_manual-concordance.tex
f515c0917619242d95ae4ca1a434a316 *vignettes/poppr_manual.Rnw
cabffd757636fdd164aa75d1efaaf24e *vignettes/popprlogo.png
8109e09afdd1606ddd6bdce4a39c48ec *vignettes/rootrot2.png
93098cc4a10527a74a5fef8099a79aff *vignettes/simulated_dist_fig.pdf
689193c6b70c3e37a7fb9f2f611f073d *vignettes/simulated_param_fig.pdf
87835dec033340eac11ef23e2ee9476d *vignettes/unmod_dat.png
