f8f63207ae05b11a6d69e199b8cee793 *DESCRIPTION
842e354cc2d463e024c8f03b887884d8 *LICENSE
bc26899837bab02c43d5cb787669189f *NAMESPACE
5810a3574fb9fc6c9ac84dbbae276fa2 *NEWS.md
e712c517748a67fce23c96f69b3cad7a *R/desc-01-AAC.R
9d8259cf782a6f965673acc980aa6d3e *R/desc-02-DC.R
5882341fddca09a092d6e2afb22038de *R/desc-03-TC.R
b6195d303a9240e39da3d64d8ba65573 *R/desc-04-MoreauBroto.R
b6c325991cfc256dc73c45c0dd3eacc4 *R/desc-05-Moran.R
b1ae91efeafcb54d5b99723f8e04ec45 *R/desc-06-Geary.R
5facb21eb05981c3b2a38a439f3a178b *R/desc-07-CTDC.R
13a81176505f616514a3c965af2de3c9 *R/desc-07-CTDCClass.R
830c175a5b57d8638e9b19431a090654 *R/desc-08-CTDT.R
a5958a0006e63299c3a60ad016a9fa85 *R/desc-08-CTDTClass.R
7291c57dbb1be9c861d36f95d19e2d06 *R/desc-09-CTDD.R
1ef3a5e2a9d549704629e754301ffb82 *R/desc-09-CTDDClass.R
bf4f3ab92aaefb16ba6dc2653bbffbe1 *R/desc-10-CTriad.R
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849a99c995532af657bfb43862cd6ac2 *R/desc-11-SOCN.R
fb9c4d64f0eac38a9f595f2988a918ac *R/desc-12-QSO.R
2ed203fb6596cea2161280308a430312 *R/desc-13-PAAC.R
9ff17e8ebc613025dda0ac71b5af5474 *R/desc-14-APAAC.R
f6545aec032dbd154b399a902a5f46f0 *R/desc-15-PSSM.R
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6c9b03fca971bd292daa952363abda7d *R/desc-15-PSSMFeature.R
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ecf5224785472a6e41b43f4e8aaefffe *R/misc-02-readPDB.R
699bce2e764ca842e6393a5e2f7d2c52 *R/misc-03-protcheck.R
c5c54cf7e5a04c6da25498ae8c91caf2 *R/misc-04-protseg.R
9ada6ff27032520deaa394e536efb606 *R/misc-05-getUniProt.R
9d9df69dbda311bcfa8cc25fbc58a6c3 *R/misc-06-acc.R
b8736cb82b8132ad05a69fc08f84e573 *R/par-01-parSeqSim.R
0d50bd1160f8de6630912148aedf9bfe *R/par-02-parGOSim.R
bfafcb039073fc2b25d27291bc9fc6af *R/pcm-01-extractScales.R
ec78a12859fb4f7cccdf796a5986f6a0 *R/pcm-01-extractScalesGap.R
d6a737ffeb2a4661b34cb96ab4777327 *R/pcm-02-extractDescScales.R
3ca02a33b711720952c54182a02313f3 *R/pcm-03-extractProtFP.R
7de69da40110448f6a0d8eec2ab49cb0 *R/pcm-03-extractProtFPGap.R
c4e130518226836c660aad7e9304cd29 *R/pcm-04-extractFAScales.R
666c7f4793bd771360bbb3ca93a414ea *R/pcm-05-extractMDSScales.R
afeba6042832c396e2073b9d872a26e1 *R/pcm-06-extractBLOSUM.R
0ec540a028b9a5d9b56458fe1bb1f6ff *R/protr-datalist.R
8fc895bdc95e04327ad2457b1d135552 *R/protr-package.R
2e0fb310097644dd173293575b65065c *README.md
a25983f940c3d9bea7de316b964dd745 *build/vignette.rds
74fd2419e84eb552d3d7bf73b5f12180 *data/AA2DACOR.rda
5b7c6f94b51a6cc85f679be46f8ca65a *data/AA3DMoRSE.rda
950a7207428adbf07025b3ea572ca17e *data/AAACF.rda
4203a744b06cc6d4d092fd44978fb1e2 *data/AABLOSUM100.rda
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94fc7c9344f718ce131af54429247390 *data/AABurden.rda
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fd12e4bda6ed3b63b9f7e8b48aeb45ab *data/AAConn.rda
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e4dc18863083c330da419217c919c2e7 *data/AAWalk.rda
fe761e0c115a58ab00a61ad6c4f8801e *data/AAindex.rda
a1d279ba8638cddc1461f4d5657f6a35 *inst/CITATION
b1806191fd90acb501aa70483e4b8682 *inst/doc/protr.R
a6d7366a1362092442b43a871dcf4a8e *inst/doc/protr.Rnw
558ae8973157a5db59d2ec389827a1c4 *inst/doc/protr.pdf
e9a8c531da4011cd6c79e837c7ca9775 *inst/protseq/4HHB.pdb
4a16b7ca86e201cec2c42382c4445180 *inst/protseq/P00750.fasta
dc85c304db0d96038b7cdab71913b2dc *inst/protseq/P08218.fasta
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4e16519c3091af55bba78c73ccb5ada4 *inst/protseq/P20160.fasta
12d1df65f398dedba3390ad8c4d546f0 *inst/protseq/Plasminogen.fasta
4fc1d897c523a5634e1b0a166d9b21ec *inst/protseq/Q9NZP8.fasta
5c90cd7a3f12abadb17c27732273d064 *inst/protseq/align.fasta
f4cc22e4b007a23c12d0be0d77cc99dd *inst/protseq/extracell.fasta
8ee3aee7929db8ea3941fc4e7dc54d06 *inst/protseq/mitochondrion.fasta
0c58ef02dc11e90eab4d304185ef7df3 *inst/sysdata/AAidx.csv
4b58694e15ff7e2952b9884c34fd4c57 *inst/sysdata/Grantham.csv
b69fe9c3517b1bb04d79fa1833c35363 *inst/sysdata/OptAA3d.sdf
7957cc59a12a8726b53d21149df781f9 *inst/sysdata/Schneider-Wrede.csv
9d7860569bd828f0f50a43369887687d *man/AA2DACOR.Rd
daae85ecf1dcf0cc570e350beb028473 *man/AA3DMoRSE.Rd
de31cb9f52fe84bd76f66b96e6afb8e6 *man/AAACF.Rd
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9cad988e3863fe607f77938eac335dbd *man/AABLOSUM45.Rd
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919853ad3624655ba851eef53cf70c06 *man/AABLOSUM62.Rd
398dc9ce8a77e015ab721bbb9b93f952 *man/AABLOSUM80.Rd
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9c645ad7504d4d0824dc644761fde100 *man/AACPSA.Rd
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af33d8aac28f1cf30fa90bf351f031ab *man/AAConst.Rd
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9acc4c833c7a93b5b8e29ca88ed22eff *man/AAGeom.Rd
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3d3535f12289599e430ab3ccfc17ceff *man/AAMolProp.Rd
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e2c6a79e18b5953d3df3447b8e6ae418 *man/AATopo.Rd
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a4a9b22a21a8cc900270ace83820b182 *man/AAWalk.Rd
58e1572c216e40bd06b31e7f01fcac80 *man/AAindex.Rd
080a10ace5d53899b14eeada6bb39abb *man/OptAA3d.Rd
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8d6f5dbf8e65133d07a0bac531e2def6 *man/extractAAC.Rd
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7ed5201f1a2f62350a1c3a089c315582 *man/extractBLOSUM.Rd
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00f68b502e57d77e3114623d46addc3d *man/extractCTDCClass.Rd
60d85454df02df911488a46130549bcb *man/extractCTDD.Rd
c3057073dfaa1f710f9132cf72e51c31 *man/extractCTDDClass.Rd
56cea85161f9246b1258648eefab89be *man/extractCTDT.Rd
1e524dd965e8e9243972d00f6ee22df2 *man/extractCTDTClass.Rd
e857a0686e122f5799d1a01ce7c05470 *man/extractCTriad.Rd
1b06919b9945cb12953e2e6840d4dbfd *man/extractCTriadClass.Rd
0e0bcca53be7d34f8a4c8e207a6930ef *man/extractDC.Rd
289a5bb436fc90d8f6213a9f9a90afca *man/extractDescScales.Rd
24beb4bb316241d91a55766e32a5e8a2 *man/extractFAScales.Rd
b26d78bf535623732d337e46cc5be713 *man/extractGeary.Rd
d91a526ab7fed3f5e5c08d511f657056 *man/extractMDSScales.Rd
47bd7037cb420a12bd6e0a1d92aea488 *man/extractMoran.Rd
de1db0103640013f1d443b4f7e1d5c86 *man/extractMoreauBroto.Rd
b70b80193d770ea912efabf1b09cea9f *man/extractPAAC.Rd
12dadd1ccf930b6d5889d18e2d7cd9e9 *man/extractPSSM.Rd
c539780a689605afbe9e19a42a43d710 *man/extractPSSMAcc.Rd
b3eaaf0e23ad0d48f44c948c53be2018 *man/extractPSSMFeature.Rd
04c22f2a463d5d94c0ba0fc701070f6e *man/extractProtFP.Rd
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64786b9cbeb0f55ef8679e1e1c95fcb2 *man/extractQSO.Rd
bd99f035f298c1909a7d040cfc0b5eda *man/extractSOCN.Rd
a53e41ce9fbbc27f6e87f898d35af728 *man/extractScales.Rd
bd551db425f7c5b1118a9954358efee4 *man/extractScalesGap.Rd
f95408a77a14c060cd45fdbdbd032924 *man/extractTC.Rd
4aa90c3e4eb82e7eff229b20a434e72d *man/getUniProt.Rd
014ed57cc524bbf1bcffc716512f9cb1 *man/parGOSim.Rd
99c494159e7ef5f78d8a8c7c09aba13e *man/parSeqSim.Rd
7f8fcdf7e0c0c9e81acbe85b9bfab185 *man/protcheck.Rd
1f78fc25b8e75726d46a4431a2773b67 *man/protr-package.Rd
e9dfa3b4657814a6e2015802ee512b39 *man/protseg.Rd
968596b1b680a3320ff1941d12bd7b47 *man/readFASTA.Rd
71703a27ad4f76312d866f85991cc064 *man/readPDB.Rd
6758eaa212504772d4d1acfe6de5b51a *man/twoGOSim.Rd
5971d4accd5f5b193786f40e099b34c6 *man/twoSeqSim.Rd
a8b92f7ece00a96c4b1c3ed99997a6b7 *vignettes/fig/AAindex.pdf
9cd0f701809c1de6eb369ece652cbb95 *vignettes/fig/APAAC.pdf
24117eed39299675686d5533b15e4cf6 *vignettes/fig/CTD.pdf
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1aa13d2372e2581dbd9164c13e5898f2 *vignettes/fig/QSO.png
87067dceab1764429e1f5ca7f83fb6f2 *vignettes/fig/ctriad.pdf
909d7c3ef95eca552daadc4116caf3de *vignettes/fig/logo-panel-text.pdf
bd9eddfa45323c67822d03ad1bc7b0d5 *vignettes/fig/protrweb.png
2e53c3a9280f6c3fe9db261ffb8ab18c *vignettes/fig/roc.pdf
a6d7366a1362092442b43a871dcf4a8e *vignettes/protr.Rnw
d2d1a9711c50833680946d9e0ba1d295 *vignettes/protr.bib
