7018d1be36b1aa715e99cca0c4b01990 *DESCRIPTION
3a717022a67b56cc3860de29b27721e3 *NAMESPACE
4c431116c694f3c5819ea0258efae50f *R/IOTCmove.R
22ea79adfe1c2e3fe616856953145d76 *R/NegLogInt_Fn.R
3380e0fded9b56de01c9362b48bc02ae *R/PinerPlot.R
2b936d4de93e43f266d0801b78ce3802 *R/RebuildPlot.R
75a1b9fd878073ee588083b14aa1732f *R/SSFishGraph.R
b12baee79dc298e0a0b7cbb91a2f60f2 *R/SS_RunJitter.R
5cc650f4ad22d20c7ece3e63271e4b8f *R/SS_changepars.R
b56a9a338730dbbf56716d1542fb4821 *R/SS_doRetro.R
262a437255aeb23059daba96b78c913f *R/SS_fitbiasramp.R
7853633f48fca90c01d021ebc4e4f50d *R/SS_html.R
dcd310940796814c9e25997b41c4fda1 *R/SS_makedatlist.R
abf0f4133729288aecca897aefc5cda3 *R/SS_output.R
4156714d596accc1b6bc9840a6966e61 *R/SS_parlines.R
a2c8d51bb14d853cb057a0fc73eed941 *R/SS_plots.R
18f990244d83fda72ec8ea64866d9f8e *R/SS_profile.R
2326747e8aab0a3408030f178f69b57f *R/SS_readctl.R
ea88037a0fec1e96144481f835c2dc4a *R/SS_readdat.R
8169ee2e529ce71b79adaa9c5fa20c7f *R/SS_readforecast.R
0f66800c1784ed705f4bbb498ea50a96 *R/SS_readstarter.R
ef98d499ffaea4b0998d47586102d786 *R/SS_recdevs.R
86c1b99bd48f5d5dee0eead63f68268c *R/SS_splitdat.R
f4a6cdd10d9e296736b7556995f8b8f0 *R/SS_write_length.fit.R
62e4295a16f55a16b5108be8399e73af *R/SS_writectl.R
61d61aa1d0246ce2b5d40d4f7a883cae *R/SS_writedat.R
5a39858c8fc4f18cd44776a6a2000f7f *R/SS_writeforecast.R
29e93467c92d789d1baa0a20945e895f *R/SS_writestarter.R
24d7a4c0b6a2b02f949eba98cdb05b62 *R/SSbootstrap.R
a39e3ca296e26bd9fcb956bf21e8e5de *R/SSchangeYears.R
9e93fefb02bc47f98dbf89174404e4d9 *R/SSgetMCMC.R
90dc41f309acf0f972fc933be849de14 *R/SSgetoutput.R
d0662a05e161670b15c02d4a262e7b68 *R/SSmakeMmatrix.R
70a428b8cc4d24b27cb007c49bccf931 *R/SSplotBiology.R
a184bd8ddcf646261aa482f872cec373 *R/SSplotCatch.R
6c545cba2909c0f1aebda9e4ae6a0dab *R/SSplotCohorts.R
db4c228783911511e39773fc13db9069 *R/SSplotComparisons.R
bd630b3b1a7eed92755b2ed0cf07b167 *R/SSplotComps.R
3238a328f07b59bdd07bf1a0dbdb350f *R/SSplotData.R
2952dc182e9e6e16457c5b4916fb4d61 *R/SSplotDiscard.R
ee83675d3ecd096fd9027904e4ccc3dd *R/SSplotIndices.R
937ebb399e44b081b7a88586c2d8ef7a *R/SSplotMCMC_ExtraSelex.R
570a8c01a9ddcc1d4d4fe2e6581596ae *R/SSplotMnwt.R
7d4c5b22e249aab9c0b82f66ca9cbabd *R/SSplotMovementMap.R
9f1e2b1b75ee459072ef193cc9e97d12 *R/SSplotMovementRates.R
e7cce1b61e995bffc47a4576873630a2 *R/SSplotNumbers.R
5a4efa2f9b5cfea366e6e260783d5331 *R/SSplotPars.R
cfaf63f112cae53b93db3f7142d3e7ac *R/SSplotProfile.R
0f6513982d90229438e82a62979d58a7 *R/SSplotRecdevs.R
a9b05e8cbd1f933b4eab028b0ba81aca *R/SSplotRecdist.R
167cd535ab266aa3f039a4b7e9af78b9 *R/SSplotRetroDevs.R
b7781ad7838a82ab5321195cb800246b *R/SSplotRetroRecruits.R
b1202e3d4716609cdbdbf32a651b010c *R/SSplotSPR.R
9050c4115df931f716ead5a3f35fef8b *R/SSplotSelex.R
5dfda90937c1fdd0bd9833d8781f3056 *R/SSplotSpawnrecruit.R
30e46038b435cb31a6ce6ac09d27bddf *R/SSplotSummaryF.R
11e0c0a4ee867118e6505fa3732d7ec3 *R/SSplotTags.R
f0df2512befc3884b955c120800c2df5 *R/SSplotTimeseries.R
124395bb9f2a5dc2a2cf02e4dc5807d9 *R/SSplotYield.R
d54e99b6856ad945bd6639fd3cd5ded3 *R/SSsummarize.R
124a78fd9b94fb796ffa791fd8b699bf *R/SStableComparisons.R
b3cdf866d920f538750c675c936fe6e1 *R/TSCplot.R
a89cce16a851ccc3231275df9c4b53b8 *R/addSSsummarize.R
abb6b948ad4e54c0f450a16a6288c034 *R/bubble3.R
ead19f0f9758b6ce4ddf6b97d886737a *R/getADMBHessian.R
d1d88528cc0d7cfb736d56e8a523636d *R/make_multifig.R
39564e3077a618f591caf79bb950b6b1 *R/mcmc.nuisance.R
ccdfa859dc1096eff55173ccf917435f *R/mcmc.out.R
eda6abdc97fc4b232ae8f4eaf14eb168 *R/mountains.R
4c635b6191204ee1f3b93ad638ccdf0a *R/movepars.R
7e61909543fd85085f8f973373185e75 *R/plotCI.R
02c020be4d8ca01d228fe7417c6aaaff *R/r4ss-package.R
bb046b1d73159ee547440d3d216de1ce *R/r4ss_logo.R
2be307adf13a16fc7aa1f6524e77a621 *R/read.admbFit.R
881b3f476aa3a1cf1e49161ae0905330 *R/rich.colors.short.R
3fe71753ef5df8aa0e2fee85696cee89 *R/sel.line.R
b3949c05b6fd6a6029eadfc7d5a3c2a3 *R/selfit.R
82be267698212c770f60fff73b32f6c6 *R/selfit_spline.R
33c96b4f63d172537f0f3aa448767217 *R/stackpoly.R
cdade15ef23f715f78cb052be67417c4 *R/update_r4ss_files.R
872fe0ca1d5bd19d04858c90c87da82c *README.md
07e5bec8594b03608e7bca0100e9aef3 *man/DoProjectPlots.Rd
23d8fcfa8d6b6c2cfdeefc73841fcf6d *man/IOTCmove.Rd
47a855158a540b17c45d7ed5ee7d40b6 *man/NegLogInt_Fn.Rd
a6e7a3f668e785b951157cdfdd0064cb *man/PinerPlot.Rd
e8fe1c6a1fddaa47be1b41084e98a195 *man/SSFishGraph.Rd
9e234facf597f0f14a981123dc7c2c17 *man/SS_RunJitter.Rd
a46ba39ceac3569dd08e317ca536ac6d *man/SS_changepars.Rd
b13f1e0cac6f52a6c9dbc42c30d15f3f *man/SS_doRetro.Rd
ee298c966bbb3e1ac0d9a94dbf86e681 *man/SS_fitbiasramp.Rd
aafb8dde3b6292c652e9e9c613e4d5d2 *man/SS_html.Rd
aa83d364a10240c657211189b704ce88 *man/SS_makedatlist.Rd
21c25c973a148547d318fbdd57154d1d *man/SS_output.Rd
71e474d83824e72f40369510c38c59f4 *man/SS_parlines.Rd
a4c94b6f43907eb37d82c9474609bc56 *man/SS_plots.Rd
e3ced95d0e76bf72f815cb10cd1c06eb *man/SS_profile.Rd
4d0636bcd37ec7e22a6b7a18604ef6bd *man/SS_readctl.Rd
069d98f054c4569d3d8171f83aade93f *man/SS_readdat.Rd
1b53412e20f09e9c06482d3f5e71d587 *man/SS_readforecast.Rd
a1ea7b97f1e6518600ddc051e39501dd *man/SS_readstarter.Rd
1e710a60ac6101a76da97743f6875791 *man/SS_recdevs.Rd
1bd5999ea61abea0e0f0a69d32ae5a1e *man/SS_splitdat.Rd
3eaab96481b5dcfc0124c8a066b4d8be *man/SS_write_length.fit.Rd
6e4e8b554b67281082145b74e24c4f3b *man/SS_writectl.Rd
0373dee0c68640e241f70a34f256b183 *man/SS_writedat.Rd
f87d5106269d7391f2b7b1a0f15cdd54 *man/SS_writeforecast.Rd
24e9ce27553a95e62d5b309865920c60 *man/SS_writestarter.Rd
5d3761bbf6d74281e22fb50e44c5ff28 *man/SSbootstrap.Rd
2e2b819124fb100ac6258b64dc63465e *man/SSgetMCMC.Rd
ba4c9af81b3abe1e502fce107f81d4bc *man/SSgetoutput.Rd
f3e1746de73a2016e6f7bd3b5dee1ad2 *man/SSmakeMmatrix.Rd
3b89b22f8a8c487ae02f1016ba0c4087 *man/SSplotBiology.Rd
6df4b7cceadd44f27df89ff9ca32ca6b *man/SSplotCatch.Rd
df4f6eef37f6ca8d1b75e8fca97d61e7 *man/SSplotCohorts.Rd
2d0c7e102411ecad28f819cc10b7802e *man/SSplotComparisons.Rd
f21ea3779e620ef3b003af93a9ed97a5 *man/SSplotComps.Rd
ee6299e5ff4a43326a77bdbcbb1eebbe *man/SSplotData.Rd
5a9fe4c5b81a3b186b611b4de56b97b5 *man/SSplotDiscard.Rd
18a69041d4ff0af87dded2b09cf57784 *man/SSplotIndices.Rd
703cb8d54d286477b907f1050e9b5b18 *man/SSplotMCMC_ExtraSelex.Rd
a6239f0ab338087316c18b155af0f2f5 *man/SSplotMnwt.Rd
b51e565daf236fc1a8bf823d060121e6 *man/SSplotMovementMap.Rd
b82c8d371c93bc6adbcbbfdc378175cc *man/SSplotMovementRates.Rd
bb5bebb3c7f534e798ccd0b7f25bf545 *man/SSplotNumbers.Rd
35488313a998830ac085b6feaf5478b2 *man/SSplotPars.Rd
064b6717872a21cdb2016d8b21d6ded0 *man/SSplotProfile.Rd
83dfd9529b1ec8a1a17cf8f2abdd3df2 *man/SSplotRecdevs.Rd
34e06a44069704cc91c568957e8494b9 *man/SSplotRecdist.Rd
fcda7746c31ac69268780fbe04c528fa *man/SSplotRetroRecruits.Rd
c3d0d811cea9040456bb7ed2806d0d53 *man/SSplotSPR.Rd
0c7f4415ac4642973e49ee215f961988 *man/SSplotSelex.Rd
4995148703bb2d570bc45a96862aa969 *man/SSplotSpawnrecruit.Rd
96e047627e5e72a36a7f693262460edf *man/SSplotSummaryF.Rd
4a332959ba2790709225b4067bc97b88 *man/SSplotTags.Rd
3f7b4f48b71992a6b89200f5e4b85073 *man/SSplotTimeseries.Rd
5bc0601781ab5db4967b359a2b53d3bf *man/SSplotYield.Rd
0fd802f355340f4129371bbaa4e74e47 *man/SSsummarize.Rd
e22807d24dcfae25d9f43caa3a9af8ee *man/SStableComparisons.Rd
5fe8bc1429fb16bc9513c497b15d7cfb *man/TSCplot.Rd
6caf3217ad68c5d7e21163d4fbec9c93 *man/addSSsummarize.Rd
374440241c4c931f18315b95388d4bea *man/bubble3.Rd
3e78ef4851e6b54638a39b714112cce0 *man/getADMBHessian.Rd
f1232259f3445a89c31af6c1d9ebc069 *man/make_multifig.Rd
ed38602337af355cf621797226328918 *man/mcmc.nuisance.Rd
5decab20bbe24295ffcd82118218076d *man/mcmc.out.Rd
280159d092536012d85becee4b9b5175 *man/mountains.Rd
37d71f9f5acab5678fc728d1475c625c *man/movepars.Rd
22375c8b750d0ec4e9ebf27643fb1a8b *man/plotCI.Rd
d329b4752f154338e3cd00dc908d670d *man/r4ss-package.Rd
fba79e789c6abb40c54657ed90a03cfd *man/r4ss_logo.Rd
94748169c7963e48a05a5f5b1f687cc9 *man/read.admbFit.Rd
921e3af1095e71fbefb20ebbd9d0a72f *man/rich.colors.short.Rd
41811e7b56bf5025628a7c1d6036d7c6 *man/sel.line.Rd
1a2c29ea11e4baa92fd20f85d1599203 *man/selfit.Rd
33bd611bcd28357d67f3a7cca399b074 *man/selfit_spline.Rd
40958528b84b5f753ce1c45c253458c5 *man/stackpoly.Rd
dc823721a3360fb7ef6089f77bdfe319 *man/update_r4ss_files.Rd
