be9f53eafafe841059ffb0086b3a3d90 *DESCRIPTION
5fe8b7257700cc4243c0bfec385c120c *NAMESPACE
d727e6090c104fd1525b41465c007cc4 *NEWS.md
83b36dad18cb352f0b43eef88406584d *R/absolute_path.R
c7e8b3b16f3bd2ce3c5ac9521350b35e *R/bi_contents.R
0f8271f83ed1de429b2918329878279c *R/bi_dim_len.R
d29c199ae869bef1ff7ef9c67f4ac3a3 *R/bi_file_summary.R
b1f9f2d98a10709c13fd04231e1bd3e5 *R/bi_generate_dataset.R
1ecf7f8a0c47f6b67809bd811340dce5 *R/bi_model.R
ca56a6593bfb8205abe8d32b2efadc50 *R/bi_open.R
a4fb1f78e9c24818495ea4afaa4df5f7 *R/bi_read.R
7b0a724c91098a2f2a5072c078044347 *R/bi_write.R
8a5f14d43d869e2a38a66fdb457de51c *R/extract_sample.R
224980d425107b86d6cab8645c13abc2 *R/flatten.r
d45b131fbfdb494c7f33b6b89cdec6eb *R/get_traces.R
902e2049c21236f272edb6c66da1ac62 *R/installed_libbi_version.r
1e56a5ea9c158b32a595d3db4e4527e0 *R/libbi.R
fa9dcb309dcbfb01447eb8ec2997aa26 *R/locate_libbi.r
f2f4075575ad2a69df51bd9cd877f43c *R/options.R
96f15ee5daa714760043a5ed0f84f71a *R/rbi-package.R
885756b0e2891764f402f573427a9dc1 *README.md
608fa343a9cfd2c36929064e10331cad *build/vignette.rds
32466cf74da6cb001f94e4f299511d3e *demo/00Index
d3bf23b5695e762c25aea1cdc5fef12f *demo/PZ_PMMH.R
b0ffbdacf28d681393dbbeea3ccb75a7 *demo/PZ_SMC2.R
753dccbbf2a295b71dda4ae4bc524c7a *demo/PZ_filtering.R
1c4188fe016045bbcd58141a79ebb144 *demo/PZ_generate_dataset.R
bb39ad1c764f8e8519eb0efd119b71ef *inst/PZ.bi
3698f600c59f2c78c59bb71b48d5f717 *inst/SIR.bi
6c4572d51bc9c4c66d89e1236ffeaa9c *inst/doc/introduction.Rmd.rsp
070dc25109d1e3a6246bbeefe87f94dc *inst/doc/introduction.html
fbc6b55f748c9105682cfb394c86c4da *inst/example_dataset.nc
102321827823eb0b1f148b0a8d4ff106 *inst/example_output.nc
9306f3bd7c8850be298a82e6f96afe44 *man/Equals.bi_model.Rd
ca40c949e2719b3c72701f0adead0feb *man/Extract.bi_model.Rd
3abc85c43be003b879e442d79a739fc2 *man/Extract_assign.bi_model.Rd
8be05d4e30a8898be254fbc217dabfdf *man/Unequals.bi_model.Rd
6967f0a607f49b8bdaee88418efcfd0b *man/absolute_path.Rd
2d5bf92ba6a24a1f5f8a7c199aaa69f8 *man/add_block.Rd
547ab2168f499aa80a07da697a859393 *man/assert_files.Rd
93167d249ed28f28528950c4ac0ef26e *man/attach_data.Rd
d0cec320bee1c15432d41cde9bf127ef *man/attach_file.Rd
3cdf40cafb5e04ee8b1f65e25521e8e9 *man/bi_contents.Rd
c71a92c9ab606b9c518b0881038ebad0 *man/bi_dim_len.Rd
beea9d2944ae9c6ac7b62982905c5a7b *man/bi_file_summary.Rd
10357e914b68a1acf218502fb4fa994f *man/bi_generate_dataset.Rd
d87c37924af357a242d54f299c805a12 *man/bi_model.Rd
6c2a7ef7fdf73a62011c4e9913520b97 *man/bi_open.Rd
d433c5b48553893a7bb0b321fc2771bb *man/bi_read.Rd
8e4e437549410eebc4418e4267bef148 *man/bi_write.Rd
61bb035687d81aa3d7936615e3e672a4 *man/clean_model.Rd
d0841ab7db564e6c472d7262f77f46dc *man/create_working_folder.Rd
4997c30c114c6cd0e505460a9d5a9a70 *man/enable_outputs.Rd
b2dffe61cbdbc63bb19d96785129fe72 *man/extract_sample.Rd
43c2700424337ddc2bf5b980d4eae357 *man/filter.Rd
3e3212658901c9fe41ee65357e8dfc31 *man/find_block.Rd
4bacef2cdbaee11ac7b0f71ed23486f7 *man/fix.Rd
859e588563ac9b6abeea6a4d6670f5cf *man/flatten.Rd
cc0e0c07027667de3e9280340c62291d *man/get_block.Rd
3c86b82ba84bb19c8dc0051fad362927 *man/get_const.Rd
7426884c2d4b6351cbd39a857dd5607b *man/get_dims.Rd
950affbe741e53e04140919caec504fe *man/get_name.Rd
c17c3eef732391f1d327f5c8a8c26ff2 *man/get_traces.Rd
11bc38774f25164910aee9d1b5318b61 *man/insert_lines.Rd
ef3043ea46b88cbbd13ea4156d43e4d0 *man/installed_libbi_version.Rd
d89c4265332d14323e3fe9c09246899d *man/is_empty.Rd
b80cdd420a5788b7e20b01f4941db9b6 *man/join.Rd
4c9aef5d7a49d07ee11234d64650d8a4 *man/libbi.Rd
48c5e91f0bc2eaa239403e4b972c94da *man/locate_libbi.Rd
fe89cadff7e71cfa33c5bd1d2996543b *man/logLik.Rd
37073dbb55ed6a5298861d8064414eef *man/optimise.Rd
5c3a1e6f11c64058be9d47f5367e8bee *man/option_list.Rd
f3d76497721895c4839f3785c123ff16 *man/option_string.Rd
26479806c496e87ac17e32d228bf624b *man/predict.Rd
3fe84ade58ea064016dcb8bc28d9c50d *man/print.Rd
78044e5c107d0772a6d0829974ee6d76 *man/print_log.Rd
e9477b7da26f0e0a1ef73990fea55175 *man/propose_prior.Rd
0a213b907174a64b4ad27aaf36579dc8 *man/rbi-package.Rd
9b1fc6bfef4d6d2ac28f4dc578629fea *man/read_libbi.Rd
987d54a72193b7c20814091c0ec10c28 *man/remove_lines.Rd
b9eb749a20b10a217a224f755e7b7d3a *man/remove_vars.Rd
888931f99ac09a961b44a41ff071e3e7 *man/replace_all.Rd
7d9847cf5199567493af7a0038e11e94 *man/rewrite.Rd
650936f36dd1affdb9644627d1c039fe *man/run.Rd
9fe6bd1f6564854ca19af66538d0c875 *man/sample.Rd
1459c996835cf77802e80328a3e0cd77 *man/sample_obs.Rd
c16bd22fda884f96d0570ee9ad7c55c3 *man/save_libbi.Rd
c2910ddf1871d76f597fdde0e469b691 *man/set_name.Rd
6dc85a2c2cafab6463db39d7fedbf8e5 *man/simulate.Rd
987d688d39e0c16d2b36c3dc20c54acb *man/summary.Rd
300126497abaee8cacb0cc278b1bce06 *man/to_input.Rd
39bd1b19de93ad4b95d8ab0381bbddae *man/update.Rd
f15c0e64101c794b2f73a5c98981904a *man/var_names.Rd
c02c8ae2c28c91bb48d60b48a4028459 *man/write_model.Rd
586b6396985ea9819f2e19f761ab81c7 *tests/testthat.R
1e1339e3866bfa3f0295946d0b19769f *tests/testthat/test-bi-model.r
8dcb8a4cbae902ed2bee7640c65aafbe *tests/testthat/test-io.r
be4ea10e1a49d3ce9fce6d3bf490dc68 *tests/testthat/test-libbi.r
3ff751543f9043bb930a38f661a0f492 *tests/testthat/test-samples.r
6c4572d51bc9c4c66d89e1236ffeaa9c *vignettes/introduction.Rmd.rsp
