200a1b6d415d38f43d8a765be35bfff8 *DESCRIPTION
5a46e24a4e144219f2d8935bad4b663a *NAMESPACE
8306da471ea252c32dcf97b45b905c41 *NEWS.md
419b40d2207a55dcc811cae6e87245a1 *R/RcppExports.R
d63bf03781991d9c0ba5f8497d7a7eed *R/baseline_estimation.R
40d988f78845da904f214749533013d6 *R/data.R
ccb726e9d6ffead2996408fa184691c7 *R/fss_exponential_family.R
ca22b594e88ad96c9f30f93b3b5a750c *R/fss_subset_score.R
d8b20c990acea0259b7b4b9e507e9279 *R/fss_utility_functions.R
e47062fb1a877d84337631b496465205 *R/mscan_fss.R
5db355790bf3f0b7802e590889ff0015 *R/scan_bayes_negbin.R
3278f480c418caea1a96011ab962745a *R/scan_eb_negbin.R
e3d283c92bc4999325924b77682acc6c *R/scan_eb_poisson.R
9626a4821d28f94b4a6fb2be9bbad401 *R/scan_eb_zip.R
e5c6d7d7fd4f478599b33b6a240ed28d *R/scan_pb_poisson.R
8510139dde455c3aeecc1f5408c3a2e3 *R/scan_permutation.R
807bfab5238ff2e6cc3b1917779f0561 *R/scanstatistics.R
854dedd6a41d9d1b913c60063c5328ba *R/scanstatistics_general.R
f3caeb3f8abdac0d30e249186bf5ce6e *R/utility_functions.R
e1b6ca7e8e46f3d7a436de206b168691 *R/zone_utility_functions.R
fed7b26554af3a5ad722fabc6d2db1cc *R/zones.R
be20b53f1770421a9c9689f71b3f73e8 *README.md
a07a9e4fff9da517afb1e75f2c98b2fd *build/vignette.rds
b1839ffdff1def58d4664b407351526e *data/NM_geo.rda
51185f9f3bdc608122a3187cfbbb5ed3 *data/NM_map.rda
939ff160fcfe3c0269241a3527cf384f *data/NM_popcas.rda
c7955696cb17c1dc385d6d38073b67ff *inst/doc/introduction.R
3f2a2cfd4053af90648401aef558161f *inst/doc/introduction.Rmd
5af27f63591fee740d8f1a121ffbebb2 *inst/doc/introduction.html
0e9d0f5809981fa2ca48575c16625289 *inst/image/county_scores-1.png
b0ecaa779f658893d163c02d337dfbe6 *inst/image/newmexico_map-1.png
20d2c5a89e7f45acdfda1217b7763bbc *man/NM_geo.Rd
5e2100091aa56cedd664b0aa8de94662 *man/NM_map.Rd
de7c7e5eba852c1e4f7d20c7e275b521 *man/NM_popcas.Rd
5c8201290932c6e5a32a5104ba835986 *man/aggregate_per_location.Rd
6117231dd5f979603ef4b4958b99f7c7 *man/aggregate_per_stream.Rd
727e40e6a447b72516eb78a9b3876367 *man/apply_rowwise.Rd
ce8ed5896e5c7d8a256c1f0b7501b2a9 *man/closest_subsets.Rd
e33b692bb17b2015cb7a90943829dad6 *man/connected_neighbors.Rd
acf86bbec37d35326aca479b0487ca6b *man/connected_to.Rd
849ebc4eff8853379d78a7364e74b1c1 *man/coords_to_knn.Rd
20303b8210e19ae2dfa812ed38ebf5be *man/df_to_matrix.Rd
d7e18a8f7cfd8d5c93636e604c487712 *man/dist_to_knn.Rd
3cd8ebc19d6c9c0fd9daec3cca243fea *man/estimate_baselines.Rd
d0af08f1e27df32ae72b5a0dc9d080ba *man/estimate_variances.Rd
6a38eac3fe8f1c49a8e662eb46a5faac *man/estimate_zip_params.Rd
79c84a1e9149cc13f5ba638cc43cde40 *man/exponential_lambda.Rd
bc5cce8ad5bdcdc139a734b7ef4a4f61 *man/exponential_priority.Rd
3977f51410c95d7420fc1111206afbc9 *man/exponential_qmax.Rd
dce274373312f13d6fe6c91fccedd052 *man/exponential_score.Rd
91634939604916501a4e51d78209ba5d *man/flexible_zones.Rd
baa9c38e802adcdec6277111b753b6a5 *man/flipud.Rd
6ef6f0d9c5a7a757a468c824825e1461 *man/gaussian_lambda.Rd
6e91a9360e45fe57495498414e969a9e *man/gaussian_priority.Rd
6739ff5ff3986b679488db2a70c93fb0 *man/gaussian_qmax.Rd
924bd48613ab330f74f536162d4bb277 *man/gaussian_score.Rd
85f4c9ed8eb2a927472fc72ebede8718 *man/get_subset.Rd
6c50f3d03f00ca5557b294c6fc12e6b7 *man/get_zero_indices.Rd
d3cffdbd2b26a1b002a2d44275f2fac7 *man/get_zone.Rd
cdc8e797a5d041aa717d9109026d9295 *man/gumbel_pvalue.Rd
618e430647e5b32af840b940ae81f734 *man/has_converged.Rd
218aa10346b931d5d148f91aaed942cd *man/if_connected.Rd
c0d4b37ccd45bf2784279f55b71c440b *man/is_connected.Rd
14ae81b50b83e467daef597753ac9bbf *man/knn_zones.Rd
77ae0ce29837a8df318f20da6b6fa7b4 *man/matrix_to_df.Rd
ddc6587ce43514b208bb17486b567e76 *man/mc_pvalue.Rd
44d20e5d2d6878132fc8b9291079207b *man/mscan_fss.Rd
aa937f081e374de5b181d028c0f317da *man/permute_matrix.Rd
41314d36b46c05cc2832f4049f7b82d3 *man/poisson_lambda.Rd
fad50dd8450a52d447dc8be3d2b9db07 *man/poisson_priority.Rd
4f63619419d02f4d052fe3a2ad768c06 *man/poisson_qmax.Rd
e7464aa7308ed3f5526d34b00f5bba53 *man/poisson_score.Rd
6ea6fce0c1a9963b8f0c6158581672b2 *man/powerset_zones.Rd
adea8922ee0fd8352ccaca1ac5febc16 *man/print.scanstatistic.Rd
c56e704afbbfe95c55dd187cd45cce96 *man/prioritize_and_execute.Rd
d4a818ed35b49e01d44d24556d5ee28e *man/prioritize_cols.Rd
8f97e25d6c6b34750a7ed0822edf3cf8 *man/reorder_rows.Rd
1e5696f2ba2aa58e93bd92e670de87f1 *man/run_scan.Rd
317710ccd86646fbb9f3b50fd96981e2 *man/scan_bayes_negbin.Rd
bb7437869cf576c2a2ba9f32f1ee6c55 *man/scan_bayes_negbin_cpp.Rd
cae661b7991fe577d93db2c8b2c2aeaa *man/scan_eb_negbin.Rd
69de8c989f5507da227f70803e6a946a *man/scan_eb_negbin_cpp.Rd
8f99d651e19ac405727c7ed7d4f41de1 *man/scan_eb_poisson.Rd
1acc3ba62b7cb385ba58111b2341025a *man/scan_eb_poisson_cpp.Rd
b37ad1786b3526a180ee056989a6cbc6 *man/scan_eb_zip.Rd
8e45a7c8664ca98f610df9eb0588c33a *man/scan_eb_zip_cpp.Rd
a05c3a32ead21467c5710543b7ec33f3 *man/scan_pb_perm_cpp.Rd
776302b1da30c2afa86b1247500da2c0 *man/scan_pb_poisson.Rd
37292a03c2fcb6b0f21362de5fbacd44 *man/scan_pb_poisson_cpp.Rd
45f6c7721f69df98bb274260b21cdbfd *man/scan_permutation.Rd
2248fd1842af25d618f38b6ac8442810 *man/scanstatistics.Rd
5e6a456912989b6187dd6a305b936f71 *man/score_locations.Rd
c89a9fdf48820f3949e71eb3ee1b3c8a *man/score_priority_subset.Rd
b45926efc309773e23e04b75b07a769a *man/subset_aggregation.Rd
ddba418c9d9b85f4a0cf3f7124ee3a88 *man/subset_aggregation_FF.Rd
2de9c19dc28564243177d5d0dd6c1bd1 *man/subset_aggregation_FN_NF.Rd
a3186b6edd0fdf3aaa784f0d60f6a337 *man/sum_over_subset.Rd
919b1452a76f202f795d50916094fb15 *man/sum_reorder_sum.Rd
5c711fdca0d7a2a067b81c338b79e0b3 *man/top_clusters.Rd
426bcd3b720dc36e6c04ab7cd2583e67 *src/BGPscan.h
2df4a3026a8513263aed3e673f8b8c3a *src/EBNBscan.h
36f43435edf892c7b8a4ffd7d4a2dd74 *src/EBPOIscan.h
1b50c1e6dfecfabec5827cbdc5980275 *src/EBZIPscan.h
cd10dde8fe0313bc82534d8cc25731e2 *src/FastSubsetScan.h
1bfce83a6efef192297ae96940fb5770 *src/Makevars
8cf1703e6e41f2393fa950ace6f9ec50 *src/Makevars.win
15729f921d5542015f4814e155d9b049 *src/PBPERMscan.h
c6544873001f2f133306259104c7536f *src/PBPOIabstract.h
cc560733f0ad4ca81aefb3da3f1b677c *src/PBPOIscan.h
39ad6ae8774a1f36b73bba9b136f9e5d *src/RcppExports.cpp
98bbd602791abd7b6b2eeeda5638ca93 *src/USTscan.h
b72eeab2025d5d75405eb4a0039cc296 *src/ZIPutility.h
7305dc4eb8430ec0b4c7e53b4c9a3d2f *src/probability_functions.cpp
8caaf71759c872e3f27d5b3176eadc86 *src/probability_functions.h
d41a50af41c33fb9592852529bec5bdc *src/scan_bayes_negbin.cpp
271305137f1dcd5a8571b96bf3b74a4d *src/scan_bayes_negbin.h
db7db3c7b3c9d00d850f77d9696f1676 *src/scan_eb_negbin.cpp
f5ed676b55e61f15e7241393a5238fd8 *src/scan_eb_negbin.h
2766ffbf6ba512a7e659e659ee6c71ff *src/scan_eb_poisson.cpp
fc4064cabaff70fe9ecdb377b7262323 *src/scan_eb_poisson.h
896084f4199b3d4e5cd908ea4ac54b9d *src/scan_eb_zip.cpp
9655343616fadcf0d44e46ad15df7ba6 *src/scan_eb_zip.h
00ab638fd60df137290be7c4ce66f3f9 *src/scan_pb_perm.cpp
cc328d895c0f3b8b4deff5f3373992b8 *src/scan_pb_perm.h
4d31a1ffdea75b33f71e695589e5911a *src/scan_pb_poisson.cpp
952ff78784164b8bd99d878373e5ee64 *src/scan_pb_poisson.h
3d58d78898aa8c73c30815fdb0e8bd2e *src/scan_utility.cpp
84d2a02dbb0ce22d26214dc2998f8ec7 *src/scan_utility.h
790f151f4d0f4535c7826a53edc3943f *tests/testthat.R
f99b287ac96540d47598a65d0c8ab455 *tests/testthat/test_baseline_estimation.R
0757c5e9101411b9b0becdd80b0579db *tests/testthat/test_fss_exponential_family.R
0ac5770a5ef8ae591e7d7977f24ca592 *tests/testthat/test_fss_utility_functions.R
f8c3a8a26617cd9097c87adeef684fa2 *tests/testthat/test_probability_functions.R
a25b97a04d56a9fce7c9e9fc10ba3bb1 *tests/testthat/test_scan_bayes_negbin.R
78ac5737c5a7e8a3786c66a0b7b69828 *tests/testthat/test_scan_eb_negbin.R
f83ce9c52fba8d70002e879c59190ce8 *tests/testthat/test_scan_eb_poisson.R
79ae196a486547f9808182a71e72414b *tests/testthat/test_scan_eb_zip.R
a66419aadf7537a13723474744509a85 *tests/testthat/test_scan_pb_perm.R
0a02f1c1d08c6d0a442e68b2add57063 *tests/testthat/test_scan_pb_poisson.R
40f27a1b95f0d5f6a2cf8b0c54bb96b4 *tests/testthat/test_zone_utility_functions.R
cf4f366ac31bfc3c33545655ef228620 *tests/testthat/test_zones.R
3f2a2cfd4053af90648401aef558161f *vignettes/introduction.Rmd
37a62ce5866c58f4d93175ec2e8e5832 *vignettes/references.bib
