809219a7e948ab5b491523189c57b8b9 *DESCRIPTION
ee8bb5792f2612253a2945343e977e88 *NAMESPACE
8226bd9eacba89b9265373bcf9c3aa84 *R/RcppExports.R
7547dc51b702c81fe4c673f51b9369da *build/vignette.rds
287eef3934c26f8292168e865fc65090 *inst/doc/jmatrixsc.R
6271c1247304e099576888065efb8774 *inst/doc/jmatrixsc.Rmd
f4c1741a6e2d8fbd6b9ff59afd87b6fe *inst/doc/jmatrixsc.html
4f1033cae48be034ce4fac83c3abb393 *inst/doc/parallelpamsc.R
3f27fab17633a3768cc317a86a11b75c *inst/doc/parallelpamsc.Rmd
68021b7d2d29a042546ec0638f413661 *inst/doc/parallelpamsc.html
a6ae6e136c036152f07a54fc31787d0a *inst/doc/scellpam.R
79dfd66299affda2cdbf93488ca1d734 *inst/doc/scellpam.Rmd
b34f7b387569d3513ecd4b3f8360962c *inst/doc/scellpam.html
3ac15e1a60a0f6cabac5f8c73aa9bccd *inst/include/debugpar.h
b7d4e487db41a240fb821aff1681524c *inst/include/diftimehelper.h
eb95da38fc3e8bee2f6f4482db71ab59 *inst/include/dissimmat.h
32df6f28ec0288f4d3548d9604eec9d5 *inst/include/fastpam.h
64ac89d0b0c5f69a8620498aca7f03e2 *inst/include/fullmatrix.h
2f8ffeb8f4201af149b901faf1bd5dec *inst/include/jmatrix.h
9e3ae907bd1b596e82e73b854a06ddd4 *inst/include/matmetadata.h
88b4a2bd69bd4a7590c5e65061f20850 *inst/include/memhelper.h
c77cbe89d1474ab5a16a747a0c069c1a *inst/include/silhouette.h
26a21b4b82d56089cb9916b992123644 *inst/include/sparsematrix.h
6cbe88c3b4937d4a072433a853be7c2f *inst/include/symmetricmatrix.h
af8af0d4d5d52892def11b0194b98853 *inst/include/templatemacros.h
e453255e14e21f7626a98e94d01fcf27 *inst/include/threadhelper.h
13fb2b1fb3dc71aefbc64eec35ca5897 *man/ApplyPAM.Rd
1302b44ef1d1207371069f3e7fce9507 *man/BuildAbundanceMatrix.Rd
9c4098ce23cf29a929347333356213bd *man/CalcAndWriteDissimilarityMatrix.Rd
d3f514108ff65d7d8b31085cc9156790 *man/CalculateSilhouette.Rd
ba0a030f4a111b7b575b351d656f5eef *man/ClassifAsDataFrame.Rd
894cfef4f83831dcf15fea819d5a862a *man/CsvToJMat.Rd
c6edeb639e299f70f03383a3f9296a18 *man/FilterBySilhouetteQuantile.Rd
686a2a0c4241a8c2ba4a607681ac9bc7 *man/FilterBySilhouetteThreshold.Rd
ddb24828fdf9ee1befffa5becb8d95aa *man/FilterJMatByName.Rd
08d218f1d393f3a143a01684ab18cda3 *man/GetJCol.Rd
d464a3939561659e626f13f8e0e7ae14 *man/GetJColByName.Rd
ad8805d7edc6d850c3109c85fa3014f0 *man/GetJColNames.Rd
850a9d56fc3836588238eef03f9d6b6e *man/GetJManyCols.Rd
8fcef375004fa74bd94235876edc0c77 *man/GetJManyColsByNames.Rd
c39de862e884cc59f3809f3ce349c0bd *man/GetJManyRows.Rd
efb25b2e39dde86feb2d4f4afb3eddba *man/GetJManyRowsByNames.Rd
4f3dd7f15aefeaa5e6b869ff1d6982e9 *man/GetJNames.Rd
b93b75cf0f3d0e2d99778635ef551921 *man/GetJRow.Rd
342074145dbc130a6baece3523593302 *man/GetJRowByName.Rd
37d880ca345da2097cc7288a1338ec2e *man/GetJRowNames.Rd
e877b9bd64d95a5f3590f065a6de79b9 *man/GetSeuratGroups.Rd
6b1d6eb3d3f2fe76f4b600edc1378a0b *man/GetSubdiag.Rd
7ba84c9659589880cdc1b95b8f176cd6 *man/GetTD.Rd
5d4ee21256183eaf61dacf1ad5dd4697 *man/JMatInfo.Rd
9659a9526a4948f75902f5c4eca8d9a0 *man/JMatToCsv.Rd
033b4915dee9ac5d560f46c1df9523b3 *man/JWriteBin.Rd
0c104e27ea1d9c3ada9ec57b71437970 *man/NumSilToClusterSil.Rd
ec6c1226482c3251abd917b4545bcd23 *man/SceToJMat.Rd
3183361d938aa858c5524cc46026ee9c *man/ScellpamSetDebug.Rd
a2e2f7b703ab20679d887a5fa525a0c7 *man/dgCMatToJMat.Rd
7b93da85af7f02f533a8ac768833ded5 *src/Makevars
5b1be82438d1868566e8503f75ca5bb8 *src/RcppExports.cpp
0c79b1c4cacb141747699af7e69b249b *src/buildresults.cpp
46025a8dcb0464fa8fa9c03a4e64c627 *src/datatobinmat.cpp
033ec5ceedbdb499cfc5b203831c713f *src/debugpar.cpp
4d1e965f323b36898d67ad3c7c061196 *src/diftimehelper.cpp
77e0e4437a70be5139b0cb34d53090aa *src/dissimmat.cpp
8ccbd0a8efeb4dcf208339d5d0fbdfcb *src/dissimmat_full.cpp
8d1f0a3be3cb78ccf7062e5baa8bf18e *src/dissimmat_sparse.cpp
8753103c933760a2dff57561c77ffca8 *src/fastpam.cpp
60f4567a3c377a712881a73b2bc476bc *src/filtersil.cpp
17ae5de1ecfb77eb54f4ac330ddd06f7 *src/fullmatrix.cpp
da0d583bea225db104b12fe44f667b7b *src/jmatrix.cpp
c6f4cc901ac914e095e8966a7001b30a *src/jmatrixaux.cpp
adb00bbe102e9d6ea5fbd9ddd1da9217 *src/mainfastpam.cpp
4ca01985aeb35b36df61807f31d60cf0 *src/matgetcols.cpp
6ad22c7de313a21783fd774646513537 *src/matgetdiag.cpp
4c030d1983ba5db8f3a13bdea4281ca5 *src/matgetrows.cpp
e8cf05757a5bd1f34b416faee98f7223 *src/matinfo.cpp
ea77cf4b4545fb7192fc957ef29bb244 *src/matmetadata.cpp
7c3859f609734aba009aa60af45fbeb0 *src/matwrite.cpp
ed0d29c45ee0f9a2e1251b68be60e1a5 *src/memhelper.cpp
52e43001d0dfca9c268ce7215585072f *src/silhouette.cpp
2a52c43c3358891f3c5e7db1cefab08a *src/sparsematrix.cpp
70ff45e046a273f79ffd8a5b68aecc67 *src/symmetricmatrix.cpp
c65fb001ca293a7b3f05c40496681ff0 *src/threadhelper.cpp
e273aaff15de6c63e649a5ffc20bc442 *vignettes/extdata/Trapnell_remain_genes.csv
f93611dd960ef5b1e6eeeaaee2e8df5b *vignettes/extdata/conquer_GSE52529_Trapnell_sample.csv
6271c1247304e099576888065efb8774 *vignettes/jmatrixsc.Rmd
3f27fab17633a3768cc317a86a11b75c *vignettes/parallelpamsc.Rmd
79dfd66299affda2cdbf93488ca1d734 *vignettes/scellpam.Rmd
774874d61fb4e137e80a3a1606629731 *vignettes/scellpam.bib
