5df805f9b20571fa32007e1e93851f64 *DESCRIPTION
21688a2e0d6dfd51c921769383d8c79a *NAMESPACE
47974c6519723b749c619184dc62fcdd *R/Ex_data.R
b39712c35fe1f54d0f2ecc00cf5d585a *R/RcppExports.R
8638eb20772df84c030de6b3702e60e0 *R/SegTraj_EM_cpp.R
0b0c9c758d407592156b530103de5fe7 *R/augment_generic.R
a6e6fc9039cbed2352cddceb298da9cf *R/choose_Kmax.R
12954aa86bc6338d4ab2fe7d34c57457 *R/function_map_plot.R
cc777bfafb8269b7658195095009461b *R/function_prepare.R
d67c0b574cfa1d41bafd8dff89fddfc4 *R/function_series_plot.R
63574d2db6d105fd0ec2574a5397e30e *R/function_states_plot.R
7ccb4b5cb58ace6ca2697c7d852efe55 *R/likelihood_generic.R
38180531e699580d0989373a66939275 *R/prepare_HMM.R
4ba005b7aa5c5cba4d4390718033bcba *R/prepare_covariates.R
796f42edc5335326b33df7395eef3ba9 *R/prepare_shiftfit.R
982818c6450f71b2f28d4e68bdd5383d *R/segTraj_DynProg.R
96bab7290f8ae7b731ecd761965a918e *R/segTraj_EM.algo_simultanee.R
b564ac5e13a3fb553d44572d2c3c89f0 *R/segTraj_EM.init_simultanee.R
7ed20a350eb21a612c59452f355f10d7 *R/segTraj_Estep_simultanee.R
fa0194569d58208a04d59bd952fce34a *R/segTraj_Gmean_simultanee.R
c19493cd181592047f1cfa75007ddf7d *R/segTraj_Gmixt_simultanee.R
70eb633a79d52b96f52d0ebfecae6a26 *R/segTraj_Mstep_simultanee.R
52ee554a6cd2d38130ccec346d2a9d43 *R/segTraj_hybrid_simultanee.R
238f0f22c5d9a46b21e7dd74f3e7afa6 *R/segTraj_initialisePhi.R
c6bb5a205cca841c5f857fcf4a1fed95 *R/segTraj_logdens_simultanee.R
a52045ec8c3d55d82c0d0aeb3c613c62 *R/segTraj_neighborsbis.R
decd5aba09f82fa54a45f699be13e1ec *R/segTraj_plot_simultanee.R
a6ff16ab3df145ae015851e1a57e1f67 *R/segTraj_repmat.R
a546f070c99242a753529eff3f9ff122 *R/segTraj_ruptAsMat.R
da2ff9046f546189b9809ba9b0365841 *R/segclust.R
af37d30ae12e4cb690d1d138e8202ae9 *R/segclust2d.R
de163ade414c15aa3c2ffd7e613a745d *R/segmentation.R
3e87c6f91b6958cd00df73cd94b8b4cd *R/segmentation_class.R
38b09057589cb208c95ff10a27fbf4e6 *R/test_functions.R
db80ce069998081db9975a5b7a823200 *R/tools.R
a74e711a39ea54d56bb1d5ad620b544e *README.md
2ed414f344135027f4e28db5d146983f *build/vignette.rds
6e9bf3e30e7baf76c538b8048a6301e0 *data/simulmode.rda
7a69f7888659dd69e91eb9dee3401ddb *data/simulshift.rda
3a4bc1fd50a7b2c1668daff6f0194f1c *inst/doc/segclust.R
dd5a5ae93f24c76055bfac57e959e0b4 *inst/doc/segclust.Rmd
f688170009dede6bbc9823f6a9ef7b63 *inst/doc/segclust.html
c39fd0651aa983aab380a684ae32bb9b *man/DynProg.Rd
0f76ac51891cc65082bed23fff7e5192 *man/DynProg_algo_cpp.Rd
01ae6c7ff41a2804efbf366b1d28eb2d *man/EM.algo_simultanee.Rd
a62f8222fb46203f1a574bb5ff71a59f *man/EM.algo_simultanee_Cpp.Rd
02d8306079d51e1b451bf27a20f28d91 *man/EM.init_simultanee.Rd
4218903337fee1bb90ab614ca2930d05 *man/Estep_simultanee.Rd
653b027c9885b8cafdfe653ca89c12e4 *man/Gmean_simultanee.Rd
948e81593a795a36f609df2bdde86ee8 *man/Gmixt_algo_cpp.Rd
1d5bb0e79bd8cbf9fe71abbf4a0195eb *man/Gmixt_simultanee.Rd
fc0bb23d0ec500ba6eafb06fdead3efa *man/Gmixt_simultanee_fullcpp.Rd
18c71f8bb0992d5df038f39a0ac4be47 *man/Mstep_simultanee.Rd
d1a96a0e8db5a5b529ebb3d16594ab4b *man/Mstep_simultanee_cpp.Rd
77f023b653d8542553e28381078bc37f *man/add_covariates.Rd
b9ee422b4cc700be7244cfe40270347c *man/angular_speed.Rd
6695343165565c0caa7211256abbb567 *man/apply_rowSums.Rd
e51e0d526d32792e7edf03d2b2ca9006 *man/arma_repmat.Rd
9ef22ae7a5cc8d371fe6fe49e3376545 *man/augment.Rd
2981c0c5423ac0e0550cea932dbb47b7 *man/bisig_plot.Rd
00b751ebd5afcac25db9f72cd4f2e432 *man/calc_BIC.Rd
1788d9a103b032e71f3a0c9009e4a253 *man/calc_dist.Rd
5fa5bb49ffefd88486f93d66e3f3ef0d *man/calc_speed.Rd
123149b56fafc1b4df3480297fca76b5 *man/calc_stat_states.Rd
e8d66ab046d1ee93581f9e4c5362299e *man/check_repetition.Rd
3982bc1c0e9ab9bf84018e1cb16d6a81 *man/choose_kmax.Rd
2f5c9a8e32a988e530c1d8e0dbc56469 *man/chooseseg_lavielle.Rd
6641e8fcc007dd233fbd71c25ccba70e *man/colsums_sapply.Rd
c695aa52870682cecb887127d06bec74 *man/cumsum_cpp.Rd
506bd629443f649b33f1565c0fceda35 *man/find_mu_sd.Rd
ad980561741a5648142fb87c4f1ad91a *man/hybrid_simultanee.Rd
5b633d17e8a338a404a137e2bccef56b *man/initialisePhi.Rd
f1934a245fe004b80db8d577b3273774 *man/likelihood.Rd
b024fd63933e332ce2257b7955097023 *man/logdens_simultanee.Rd
c42dab74cd729ebf84d0e94a52624f89 *man/map_segm.Rd
f9b28005593799e60de5c5585620d2b0 *man/matrixRupt.Rd
566e3c40c2b4ef5fef61029384a136db *man/neighborsbis.Rd
1f0e8afbb3259b42ceb7ed64216a66d3 *man/plot_segm.Rd
8ab326654752234d6960adfd5b065822 *man/plot_states.Rd
98c66ffd4aa4f43ee253d5f7aa88e734 *man/prep_segm.Rd
8558675d733aba27a7262094525a583a *man/prep_segm_HMM.Rd
12d51cf57db7b1abaef0cb693a3217d3 *man/prep_segm_shiftfit.Rd
c2682a40fa055b86809b429aee1b3263 *man/prepare_HMM.Rd
af9d35267c336ae2123d2848570a05c2 *man/prepare_shiftfit.Rd
abbaf73ceb6037c7d4c9eeef4faa5cf6 *man/relabel_states.Rd
0bee7f6d0b22fc4ddd75b505cc608b13 *man/repmat.Rd
3b1dd714999d533301589b8132ab900e *man/ruptAsMat.Rd
1223c58a0921f31f60fca083f318ca2b *man/segclust.Rd
b13e67914fdf1040e8a09ade00b3c156 *man/segclust2d.Rd
83b00be544cd53945b4ea05715b2f6c4 *man/segclust_internal.Rd
87716ce6a68f9ef806f05c85b3b5311c *man/segmap_list.Rd
86ff66c4cc128eba2a5608865361f124 *man/segmentation-class.Rd
f0a70a2dd7ba48ceb274ce8a9e98c798 *man/segmentation.Rd
92f24f8fb3b2947faf70d3ca0d6b47ce *man/segmentation_internal.Rd
1b57bafde50350dccab053a9ddac37a9 *man/simulmode.Rd
47050c054ee4f1160d118a5f5f15b074 *man/simulshift.Rd
94500443a88f4b5b62e4ca1a6312c076 *man/spatial_angle.Rd
fd6795879a6ecdad92b92bc274a75811 *man/stat_segm.Rd
3f80a7b545bf2ff84085e273fff491ac *man/stat_segm_HMM.Rd
dbb70dc6138118713c20711be99ee5a4 *man/stat_segm_shiftfit.Rd
98d91d2cfefe1eaf294d36717b8d70d1 *man/subsample.Rd
2b4f40be1aefc696f987bb9b72a561c3 *man/subsample_rename.Rd
9020eb02bca05cf879d6ebef4b879023 *man/test_data.Rd
a7cc57dcd95370f7410675ce2dbf2094 *man/wrap_dynprog_cpp.Rd
3f6769a3d19b987ace59bb01e4a5c8d9 *src/Makevars
630027b9c4921953a73e8712b2b8d22e *src/Makevars.win
77ef684cf08094dce391484386a8cce4 *src/RcppExports.cpp
fde75a2789c286da5a88c1ac0fd63edb *src/SegTraj_DynProg.cpp
0176b4e9e88ef23be6e94c653f724112 *src/SegTraj_EM.cpp
77a733222fd845fb398af310bee898d9 *src/SegTraj_Gmixt.cpp
ff3139c1cb0e14f2d7433546171363ed *tests/testthat.R
20ee6ca1c22bbe452cabaa563bfec20a *tests/testthat/test_segclust.R
dd5a5ae93f24c76055bfac57e959e0b4 *vignettes/segclust.Rmd
