9b4d7836c91b557dded2e38aa7c620e9 *DESCRIPTION
887ad6e4d88ec0f6f68df6f39eeff57d *LICENSE
762cf082c9c3729509818f922e3b4237 *NAMESPACE
ff406f9b3dca792fd80d82697db143c1 *R/data.R
405a25bef7b2825e10d67b576aa26c97 *R/haystack.R
aca2b8457540f3596a3e2933bf00134c *R/haystack_IO.R
542148899c9a1223efe9593841a7c3a8 *R/haystack_clustering.R
5256f21b585a023d77525dae63841b48 *R/haystack_clustering_highD.R
b02e6827e153cf3cba05830d37acd3b0 *R/haystack_highD.R
badf8ffecfc3f99702e328eb603a97c9 *R/haystack_visualization.R
a303ada72ae3458add34d93de8e60192 *R/s3.R
eef07ddf1ee03e1b32996fbccb520a30 *R/singleCellHaystack-package.R
779290fdb795b97cf6539178856337c1 *build/vignette.rds
9b9da6d5a58689495957b71af287381e *data/toy.rda
c9a17c2d7d48382ce7d1478909d669ce *inst/doc/a01_toy_example.R
2998f32da4082c9925414d0ab0780a34 *inst/doc/a01_toy_example.Rmd
8800b0971ae95534500a02ca7659a992 *inst/doc/a01_toy_example.html
9c42d203b21aba19b9e53924c3a50a58 *man/dat.expression.Rd
b83ee91ffdf096a9869cc6eb1784979b *man/dat.tsne.Rd
4422945559886109566c0ff55a299476 *man/default_bandwidth.nrd.Rd
8e1b4f3c19e0bdda7d1c8a0ec696e8b8 *man/figures/README-example3-1.png
121642898b812137fc7264002e23b28d *man/figures/README-example5-1.png
c055c0019a772ccd4a9bcdb5ff184c97 *man/get_D_KL.Rd
839dd089f1dfb1bfa4372a597ef45bff *man/get_D_KL_highD.Rd
817667b8527089d28f7183fd64fe32fe *man/get_density.Rd
58e7c03c15d03260bd908feef15fec84 *man/get_dist_two_sets.Rd
94f0d8b9a60a3d672fcba87b711f63cd *man/get_euclidean_distance.Rd
6fd8ac3a1836a1c027b6c3c5e009dc88 *man/get_grid_points.Rd
0707c8e35b74122557eaec8db4dca13f *man/get_log_p_D_KL.Rd
be875eb9ad3270cbdda53291e83c4647 *man/get_parameters_haystack.Rd
aad34580f142a214bf2ab224a8402e53 *man/get_reference.Rd
2baf33a22be016cece76f313475fcf3f *man/haystack.Rd
e8550a0e1d1aa39a49785c83980c6530 *man/haystack_2D.Rd
61cdf725d830f0d413cf95931a55dade *man/haystack_highD.Rd
5df70c9edd38323f1a76179f16a660c9 *man/hclust_haystack.Rd
ceb1760ba846a6887011227f81903c1c *man/hclust_haystack_highD.Rd
9076a33c32c1ba3e0042245a997290fa *man/hclust_haystack_raw.Rd
064f5eddd3084acb73d5d43fab9b3aae *man/kde2d_faster.Rd
2c768c0133a5ccbbf898aae96595cc34 *man/kmeans_haystack.Rd
a5a81bba8179a7897e66ae8cb8c5ad0d *man/kmeans_haystack_highD.Rd
af254517b87b84119f1fded85ffcfb10 *man/kmeans_haystack_raw.Rd
4cc6d846de89070cdbe9b6b7183f43bc *man/plot_gene_haystack.Rd
ba06b2af7c4edb376e1e853ef636c10f *man/plot_gene_haystack_raw.Rd
5f95fb6a45bc382c22622fd90b75c21f *man/plot_gene_set_haystack.Rd
88e022527a851d4f41f225956d64ce1f *man/plot_gene_set_haystack_raw.Rd
76697a4eac9db58a9466174a75215a5e *man/read_haystack.Rd
c80851b139328fc47a30a9b6f67ea18b *man/show_result_haystack.Rd
715bfa37d4e9533a4910a5a2027c3ede *man/singleCellHaystack-package.Rd
ce612178073f3a745709f72842c78827 *man/write_haystack.Rd
f6b3e6aacd895152a93af5c2052591c0 *tests/testthat.R
ac558275a3d588681d94c37a22c2c420 *tests/testthat/test-get_d_kl.R
5d4a08b60d6eb588967bf0774f125a4c *tests/testthat/test-get_parameters_haystack.R
2e5f68063e13b6c7048339e8cae479d4 *tests/testthat/test-haystack.R
9012df3787a849559ee259444c067bf6 *tests/testthat/test-kde2d_faster.R
2998f32da4082c9925414d0ab0780a34 *vignettes/a01_toy_example.Rmd
a7b573def74d6c656ac131c90f0f0f19 *vignettes/examples/a02_example_highD_default.Rmd
452141546c68c9048b10d8afc1b38518 *vignettes/examples/a03_example_highD_advanced.Rmd
792d7535bd2a26d3630ad59e7eb77e27 *vignettes/examples/a04_example_tsne2D_default.Rmd
ff1964d302afbe590c2fb18413aa95ac *vignettes/examples/a05_example_tsne2D_advanced.Rmd
e29aa170ee5e9a19f157a111a744eacc *vignettes/examples/a06_example_spatial_transcriptomics.Rmd
