474836f445298687a9bd0f7d989fdbaa *DESCRIPTION
6cf7cff29512f5d194dff0cf1ee01dc2 *NAMESPACE
cdb9c5da6a748b61170c1733de5122a9 *R/Extract.relationshipMatrix.r
141f89a70fa09ff2c5bbbb740786ef05 *R/LD.r
0683be9565f578080e92d280461e67ef *R/LDDist.r
34e94af686d897fa9352ae8a5abc21a2 *R/LDMap.r
6c6b43cece684eac36993f1c1191c319 *R/MME.r
f4c20d27c9cbe621c9278ebab88d9841 *R/add.markers.r
6c2eafc991d1e3e561dbe40b0f3dabf3 *R/codeGeno.r
41ec6e847a298a3f5daa0694a25dccf5 *R/create.gpData.r
9d62b2bd61d7d896296f9416d2aa2286 *R/create.pedigree.r
db822db5f3416812878ffa27541e9ca9 *R/cross2gpData.r
18f3a5500286b06c9abb9aecac4fe435 *R/crossVal.r
c5794970f473037fb151dd86852b0f10 *R/discard.markers.r
d841863795e4c431d73b22fc742fea45 *R/gpData2cross.r
b69294e927cfbd1efc44632f3ba3f7bd *R/gpData2data.frame.r
559cd458a8e7bc8d7b9e765f3f12a218 *R/gpMod.r
17805041b022b7f565e00634849dea65 *R/kinship.r
7a417105db49e695d516814bf4693817 *R/manhattanPlot.r
2f072c1fc5946425ea73caec3a63b1bc *R/plot.genMap.r
aa37464a16ec93709530d289c05c46f5 *R/plot.neighbourLD.r
f083f5e2e2f9c2d421ff42b240a6a2e3 *R/plot.pedigree.r
0647d49eb20e1ac736b985c6d83ff879 *R/plot.relationshipMatrix.r
cb66b1514c15ad8e2dc9514a8a8bac9d *R/predict.gpMod.r
1081826a4318ff083905a5e49b1b0bf9 *R/simul.pedigree.r
db72bd5ff81194207d9bfc4500328c70 *R/simul.phenotype.r
659986dcda903a33802aff8de729ab8c *R/summary.cvData.r
ffaed96e8546832e61b51499c5f3e665 *R/summary.gpData.r
8a3b3abb5c0cc4bf721997a9bb25fa6d *R/summary.map.r
123a3582440892a5520d23b908f074a8 *R/summary.pedigree.r
27438e94a44f09d9640e9e42a5098f40 *R/summary.relationshipMatrix.r
6d8115e824d07d3a881c358a97afab83 *R/write.beagle.r
0c42006ddbdea6271a30bd60fe8cf97c *R/write.plink.r
65903d387cb622168ead03cc9174e1d0 *R/write.relationshipMatrix.r
2760b50da4fde441c793f37fc2956851 *demo/00Index
041a2f6f832d3294d757469d6d646625 *demo/createWheat.R
99d24a007e3a2f49fbf7c8c4e774fa70 *demo/gpMaize.R
fc32074b371983bc1fbdde1988e0348d *demo/gpTest.R
6aa8a17e6568211957d1436c1a5e3c01 *demo/kinship.R
178e47ff524ea91c6d5c56cb4fb4a4e6 *exec/beagle.jar
9359ea2b4e7f895be55be9c0ba423969 *inst/CITATION
08067b51092eec72efb29b5cd097c4f6 *inst/doc/IntroSyn.R
2c0c8cbb5ea4af45178c12de0284e429 *inst/doc/IntroSyn.Rnw
c0ca9706fd55b762bb56efa4fbac20bf *inst/doc/IntroSyn.bib
aba12efcd21f5ef2eadc4188fef8d82d *inst/doc/IntroSyn.pdf
1e101b0532c8ef63b1c553b663528e22 *inst/doc/IntroSyn.tex
a38d834a551d1053ed8a835c8cddcb02 *inst/doc/bm.sty
1394484863f8bbd9ad957d8cd4f03af5 *inst/doc/cv.mice.Rdata
398064e67165143bf0073e4558b2b503 *inst/doc/figs/LDmaize.png
cf51af90ddf0684169af1a75b2c5f4a1 *inst/doc/figs/cattleHist.pdf
1f561e3bf3d581c5dd3bdef443ed6c40 *inst/doc/figs/genMapCattle.pdf
12a5638fc09b897aff35484bf0c8475d *inst/doc/figs/genMapMaize.pdf
638b34636c209f5707269dcbdab66ad7 *inst/doc/figs/genMapMice.pdf
07546a31f436c0e1115eed3987092cde *inst/doc/figs/maizeHist.pdf
2c6edbce1d03213476cd6170ed6f5677 *inst/doc/figs/manhattanPlot.pdf
9274a2cd4e94c8ee318082a74019354a *inst/doc/figs/miceHist.pdf
d04e9b025ddeacb0e801d724e27b833a *inst/doc/figs/relMatA.png
02d7b4f6733418ee24f011546011f662 *inst/doc/figs/relMatG.png
e24f176a468cb04c03a09a9d0a557f41 *inst/doc/figs/synbreedPackageDescription.pdf
392401bd2e862531a3f4539d5a227b73 *man/Extract.relationshipMatrix.Rd
a1f84a61d5d01e70255aa2d91ca3df82 *man/LD.Rd
58daf86f1516a40c50d7cf59ac04e69a *man/LDDist.Rd
7cd588e18b8b1462cc8aeab93bb5672a *man/LDMap.Rd
c8f12913f80088dc986f4b1cf29a7d30 *man/MME.Rd
97346919d8fefda0545aee5bd68ca375 *man/add.individuals.Rd
cf2eb85f5ef22f7861c788092d914c46 *man/add.markers.Rd
e09e9a60027e6f0529001822ff2bf816 *man/codeGeno.Rd
f8c9040a6bcf093dd33257f59b31038a *man/create.gpData.Rd
ddab8f49ff6fb4424fcf3313f056ed5c *man/create.pedigree.Rd
3bb1546106fa0f23f8f70a12a3f9e3f1 *man/crossVal.Rd
02b3c5962f885832b8519e830b9a120a *man/discard.markers.Rd
33d22c23e11fab2d4971e6861389b5a5 *man/gpData2cross.Rd
599b4811a7953eda1232844bc1bb5a9f *man/gpData2data.frame.Rd
07fc339b3928e2913a22c58101d6e9b4 *man/gpMod.Rd
d89409dd7f664bc3d155237b4cc14b7f *man/kinship.Rd
e02380eb7b78521f9f64adfbfc0e0567 *man/manhattanPlot.Rd
56f2dd4fc8933eaf03b5ba7bb9863747 *man/plot.genMap.Rd
8aeb1bfde752bf24d5581b4b99ea0cb8 *man/plot.pedigree.Rd
5d5c2913f2e8f678620140e7746134d3 *man/plot.relationshipMatrix.Rd
3b66bc0c14b58896855d53314c832dc6 *man/plotNeighbourLD.Rd
068bfb70ad96e734e4ec911f478f9a67 *man/predict.gpMod.Rd
160c19d46dac16b05e23c3f655f23b7d *man/simul.pedigree.Rd
07f4429ea42a7234084bcf654d325395 *man/simul.phenotype.Rd
63333cfcbe0840605ab34a87467c5b81 *man/summary.cvData.Rd
e06604a6c40be8d682b7d399e012d923 *man/summary.gpData.Rd
454bcaf2989cb4fb0396a697667acfc9 *man/summary.gpMod.Rd
b01cb468da8a57d85760264fb252db43 *man/summary.map.Rd
9c747ced769267446d866f7ae22e731d *man/summary.pedigree.Rd
013f43d36c910755e6b8314beb93bddd *man/summary.relationshipMatrix.Rd
59350f4ef164f0167a289c0070b4983c *man/write.beagle.Rd
c9676e171cc1bece56bb0c9513689474 *man/write.plink.Rd
6b6027aac0b8873a4489dac87ce08aea *man/write.relationshipMatrix.Rd
ec4a25139549f11f4cdc935870c9ebb3 *vignettes/IntroSyn.aux
83dd24eb5a9ff1f70f8b18fe33a919d7 *vignettes/IntroSyn.bbl
1c619fd3d3a7cba850c3bf005f5c1d8c *vignettes/IntroSyn.blg
1a7a00e1461212339a3e6aa4a03bf09a *vignettes/IntroSyn.log
994c8e8c5198785f78d0deb1bbdfb490 *vignettes/IntroSyn.out
60001be2eb75b556700474ac2fdfcb11 *vignettes/IntroSyn.tex
14b533592c68ed78a36e40bd9f5043dd *vignettes/comment.sty
2d4291e8038814b410fb50db0d27bb85 *vignettes/pdftricks.sty
