9d014a5cadb10e56f3c341c3be74e399 *DESCRIPTION
d45a3f2ebb8b5e0b7ff16455c2ec13a9 *NAMESPACE
281f5b188fc890afd085aba077e8adfa *R/RcppExports.R
b1e34ad9896a8e6fd5019eca9101573b *R/data.R
fd5f21678765fa6137039093b8a6159f *R/findGroves.R
8e4f32036c80524b259f1cd154269b87 *R/medTree.R
2a853e0e543cc878b8e4cdc13fa0faaa *R/metrics.R
853ce55aaf285865c150886e3039c005 *R/plotGroves.R
0df595afba7c2ccd0147b637f24d1398 *R/servers.R
37767830b5e41f3f8734ac547fcd1f6e *R/treescape.R
5fae32533b96c64576e73409028804e7 *README.md
06c45e5e2bbc24476862f1d63d8b1a90 *build/vignette.rds
f128fb06ac44efd32fb04ecc06896bd2 *data/DengueTrees.RData
e49f82b9d2e4e04959fc1609e3242de7 *data/fluTrees.RData
48df74b1807cc03a99ea9f4d16e0a8e9 *data/woodmiceTrees.RData
dfa60aa5de4de6f011edf857193d9c17 *inst/doc/treescape.R
e977648a13d059f4963c8cf4b0c62c77 *inst/doc/treescape.Rmd
46bef0eb41fae2fd621ef28628fc9442 *inst/doc/treescape.html
571dbf76b8a893fdfc32ead1a6342cb5 *inst/shiny/server.R
edf0f1d1f0798446b7f8bb137658e57c *inst/shiny/ui.R
72a52ccb88878f4fbc01b01c956377d3 *inst/shiny/www/bootstrap.simplex.css
0fd513e9d0ff77def73b36c21f23d7a9 *inst/shiny/www/html/help.html
d8684ae68cfdcc9049f1ff417ce3c3eb *inst/shiny/www/img/line.png
10c78105a7ca827999c25885a737b878 *inst/shiny/www/img/logo.png
a3b04f7c959c219efe59b17245f4438b *inst/shiny/www/img/svg/main-images.svg
925db39df2e413d1bf9f149fb0883860 *inst/shiny/www/img/svg/ygg.jpg
4c310bde08e114bcc81546201149f9d2 *inst/shiny/www/styles.css
92b8413a207c9c826d5e4d50d2c3e949 *man/DengueTrees.Rd
eba506be4bf2ea7f6d81728a1300bd26 *man/findGroves.Rd
954752421d63504a7697bfe389a55b79 *man/fluTrees.Rd
5f8d90d6d647f72f071fd58aea739068 *man/linearMrca.Rd
b7f623435083a5185153ca00395b46fe *man/medTree.Rd
e6bb1cf7a0c4a191b0922b004912a0de *man/multiDist.Rd
736ee7b68dc3b8b8740a6399736accd7 *man/plotGroves.Rd
8fc8c46369a05dd1f14aee6f8d6facf7 *man/plotGrovesD3.Rd
2cf4883b19e75fe6dbd2dfbe856dd256 *man/refTreeDist.Rd
6b629fc2baca04b9b34fe142d8a35ee2 *man/treeDist.Rd
56aae6c5bf96ea75e82add8f64c22a27 *man/treeVec.Rd
a823bddea950e71916d1dfb12ec6bcf4 *man/treescape.Rd
573082f274bb8b87b340eff4721c1589 *man/treescapeServer.Rd
ade0ea8544defcd9653327459b7d73b0 *man/woodmiceTrees.Rd
9c74c81eeaf5d8af22cd33dab4daffcc *src/CPP_update_combinations.cpp
34267317e05e7c08082fff831a20b0d9 *src/RcppExports.cpp
0b23b4bc5856e5e392f37fbdeee6fd16 *tests/testthat.R
7556a5ff5872e8618d5a686d8231345a *tests/testthat/testbasics.R
a674c967f24e2d75e9636f511bf6e04e *vignettes/figs/distances-1.png
d2765ad3784553d03d5b726778a15045 *vignettes/figs/distances-2.png
30508f324094dcf0ae1a80ba61d608d8 *vignettes/figs/findgroves-with-emphasis-1.png
f55c2b82f4ef62c732bbd9dc5ee6e43e *vignettes/figs/plotgroves-1.png
3b9bc2cb97bccfdf35efa746b694030e *vignettes/figs/plotgroves2-1.png
151aaff718dc6e975c48955a4c0800ae *vignettes/figs/plotgroves2-2.png
45abe4449f60408dbfaa24f218909fe4 *vignettes/figs/plotgroves2-3.png
5079b3ff8edc9ff4d5f5fc61791e1ae5 *vignettes/figs/plotgroves3-1.png
ef6ddc98745c653d97f8b60c4a32587f *vignettes/figs/server.png
dece84f823670ff0e7257cc643bf068b *vignettes/figs/treescape3d.png
3957a3c2207cd065f1d95cc704ebaa7d *vignettes/figs/treescapeDensiTree.png
32257dc64bf2670d28770a4679f063a7 *vignettes/figs/treescapeTree.png
bfbbab4819043490cb45ddf6e02723a2 *vignettes/figs/treescapescatter-1.png
af3b6f72f092fdaecb91020563156f0a *vignettes/figs/woodmice-tip-emphasis-1.png
6ded541389407dc60cd7a05268579cb2 *vignettes/figs/woodmiceCluster1-1.png
2bb8dcc526533ca618c41786273f1d75 *vignettes/figs/woodmiceMedian-1.png
c30540b3158c32b25ad1cc184288dc4e *vignettes/figs/woodmicePlots-1.png
5bea1092c5f8839f0e8e307af1c60276 *vignettes/figs/woodmicePlots-2.png
3adb1717fd90a034b852d4a814941903 *vignettes/figs/woodmicePlots-3.png
8d5ea47fe8ccb3958cf999a4f320b206 *vignettes/figs/woodmicePlots-4.png
03bdc126af6c56b5d0f09d75e952ad7f *vignettes/figs/woodmicePlots-5.png
80689590a827115c927a70825e10162d *vignettes/treescape.Rmd
e5764ea79395df52bb73f78cbddf1cd5 *vignettes/treescape.md
