6773454e51012117628f30bb9e39d1ce *DESCRIPTION
3ac19edac3f648d2194651cb6894f769 *NAMESPACE
9b47f1fd2f42fd2358910f92c12b624f *NEWS
833cdbfab11438556285f77352c91a72 *R/BF_Rao_Blackwell.R
12635212343dbd1910914ec5bf4f2224 *R/BF_auxiliary.R
8c28970a0cefb1d23e4905d3bbb7e4d8 *R/BF_likelihoods.R
dff0a1571afde515135f6a98d7625666 *R/BF_marginalMPT.R
cc83862ef8c67ebbf74a2a1f8f2a3763 *R/BFslope.R
ad26435dabff9ff77fba3ef2f98f2635 *R/PPP.R
b373dbe00b31c47ca8d715d93d887d29 *R/RcppExports.R
37f706a9bc949b151c8fa357c463e7aa *R/T1perGroup.R
4aa18e008b9f531cd7948ef27dde318e *R/TreeBUGS-package.R
bea670158a52a336f7aea54ac542b07b *R/WAIC.R
6bacb9bf2e9ab7bbd398032d0bd29730 *R/arnold2013.R
6040f09bed883afb0dc1ddb40d5a59cf *R/betweenSubjects.R
9bd58ff119024a06759cd39a26c94ec4 *R/callingSampler.R
5beed6fdaa74b408457a0ad781249599 *R/checkFunctions.R
416ca919bc2eb213fd40d4fe2c1d984e *R/corSamples.R
0ae135f6eda1db38e63c980224ea9f73 *R/correlationBayes.R
7d8527f5a94fdffae49c4d6948d2def2 *R/correlationBayesMCMC.R
f115512253de6b13aadb167925bacce3 *R/covCorrelationString.R
138482d45be33c4142b7458f1e44268f *R/covDataRead.R
b62dcbd2e10b85cb34e339d9d20501d1 *R/covFactor.R
9ecd3e709c237d7203c93f48d20ea614 *R/covPredictorHandling.R
f97eb1728bb12b767ffbd296840cec9b *R/covariateHandling.R
505c450436f144b0784ae7648ceaf14d *R/extendMPT.R
d05b186a00f9aa999fbc1d2edffba411 *R/fitBetaMPT.R
7720e6fc7dcd2c577f90994162793169 *R/fitBetaMPTcpp.R
eeddb598219b39e746b578c02b4d414b *R/fitModel.R
4bfc5acd5bc394847901d9b64007d302 *R/fitModelCpp.R
c0a9d179fb350ed6ece6c57cbeb8b4ab *R/fitSimpleMPT.R
9f4c7a218163d5bd62d8f3f8075b65f6 *R/fitTraitMPT.R
d3d947fd4744305ca86b88f4ef7a64b6 *R/genDataBeta.R
289be9424339fefb2fd5bcf84b0c4dd7 *R/genDataCheck.R
3a68dc58d3d7b3bcea72617c2a1c942f *R/genDataMPT.R
6f04817e27888de0a5b7a0adcc78f7a2 *R/genDataTrait.R
9cf74d1fcfaf7890b20ef0d9752e2f58 *R/getGroupMeans.R
b62caec5d3271057bea331f26aedf77c *R/getParam.R
9fd98ba1971bc7fe609dd771f70f691b *R/getSamples.R
7dfec64b1a2337b06cf504e65a858055 *R/input_functions.R
c3107e91ac34c3d30741a5ba45143ff5 *R/makeModelDescription.R
6134571b4221583042ae23276e178fe0 *R/parseEQN.R
5664f320b00e0be803730318fff76462 *R/parseRestrictions.R
6c539035cdc28ff16c274c25ce55fbef *R/plotConvergence.R
872fbdd127e300cb204a2e8206fe51ee *R/plotDistribution.R
0efbe600c2454c461136ce61e85e3d4e *R/plotFit.R
4bfbf99eedf60e1c227ec8a75d0db695 *R/plotFrequencies.R
9d32b7b1de33dfe66db825bdac56159d *R/plotParameters.R
44e177e3784ff75a8ff2069a0ee1ea28 *R/plotPrior.R
fc8c02267cfbfbd22b120d1718b33731 *R/plotPriorPost.R
15102a693466bb0db0169760224b336e *R/posteriorPredictive.R
82da9fd3e5d2f2dd2e9fea5bb578150d *R/printMPT.R
70dec54d19730f48099e2463ccc35f0b *R/priorPredictive.R
61c702fac4960cf313af1a41e2bda951 *R/probitInverse.R
c73cdcdbd10923fd9861b14e13286dc4 *R/readEQN.R
645cd71f283353fe336d6bb9dae0eacf *R/renameBUGSoutput.R
6581dcbe93d808496363ffe382303a2b *R/sampleHyperprior.R
7617568f2ec9c8de71b0c31ad0a7f92b *R/summarizeMCMC.R
d40e1be8a7a3f9b85e19a445122fa87a *R/summarizeMPT.R
24a0c6dc92c9c774b57bc9ae1c8e6990 *R/testHetChi.R
6eec770c77e56a7eaf04319931840a9a *R/testHetPerm.R
c6c0e68e6842c81115885c668f761e65 *R/thetaHandling.R
d98e04b490ea0e8d2e43ceeaff80ee00 *R/transformedParModelfile.R
9e9c171e79c671ddce62a07a01d647ad *R/transformedParPosthoc.R
d1fca300f4d46172bc2d266f245f64e1 *R/within_subject_EQN.R
ad21ade55e1b6e5357db1587ff50f5b8 *R/writeSummaryToFile.R
f01682ffd9d5582c0d3b8a226f3c2b16 *build/partial.rdb
7d99720e27320306d8b4dd3895762be4 *build/vignette.rds
71355a4f936ee6d3f69e673fa73d4237 *data/arnold2013.RData
961c2d42a3a9c99445f07efdf547ffb8 *inst/CITATION
05e74db71d7fafbaacb957b1daa34dba *inst/MPTmodels/2htm.eqn
d9a6bed11ce4e4545fd0001882d8b950 *inst/MPTmodels/2htsm.eqn
c68dc54b1cbda575c4d8288f1bcabca8 *inst/MPTmodels/winbugs_zero_trick.jags
f4eb373bf0db31ac3a40806e734938d2 *inst/doc/Heck_2018_BRM.pdf
ac3fa030761c52a63ae1195498a032dd *inst/doc/Heck_2018_BRM.pdf.asis
e9a552c01a5e3e13a9779ad0903c5782 *inst/doc/TreeBUGS_1_intro.R
d213cc86f248e54706275312b0a41caa *inst/doc/TreeBUGS_1_intro.Rmd
4d699f5c80d1056e49fead40a5f2b776 *inst/doc/TreeBUGS_1_intro.html
2d58266f2d73b2980b0d4fcfd91d8a77 *inst/doc/TreeBUGS_2_extended.R
82cb31abaf8978cd85f8d366179580f4 *inst/doc/TreeBUGS_2_extended.Rmd
43212e010da6d236fddc4ddbf2199e8d *inst/doc/TreeBUGS_2_extended.html
887edb6a9334f697a735b55047961e69 *man/BayesFactorMPT.Rd
2958d9d4fe76af0193503260c34f5e44 *man/BayesFactorSlope.Rd
b38a28fc4ede32704355970ab8527578 *man/PPP.Rd
6b0ec7a977429a0f39f15f98d86e8ba6 *man/TreeBUGS-package.Rd
d0732504b1b3fc3b7b44d53ad427a4fd *man/WAIC.Rd
16e8ca03d3b0b33dbb669b275f661e66 *man/arnold2013.Rd
d22731dba0caf6eb423fcd9e74eb806a *man/betaMPT.Rd
a074bca80cb5822476938fe38e8116da *man/betaMPTcpp.Rd
b0cc45d6c14aff6c66a407ad7209ad8c *man/betweenSubjectMPT.Rd
0c53354698cc303b615191b5f02d4b62 *man/correlationPosterior.Rd
7c19845c9c4677cd675282ed08b9defe *man/extendMPT.Rd
91709228a9d5cd404adcfb517147c703 *man/figures/TreeBUGS.png
2ab5628ad8ca204bb289a44f2cbf40bd *man/genBetaMPT.Rd
cca52d3d829a78ca07cbbbfb34bd6ca2 *man/genMPT.Rd
1c0534c946fb2ec87a91d0a60493682f *man/genTraitMPT.Rd
6e01fe052741a8268dcd371f42dc1b57 *man/getGroupMeans.Rd
e253832fb645ef3e01b23ddd4d966d90 *man/getParam.Rd
6dee16db51857e99c5e6051f28cbfaaf *man/getSamples.Rd
1c7212d9d57d1d13858fd4dd836d5a02 *man/marginalMPT.Rd
18c3143bb7ec60c2ab5b1561729212d0 *man/plot.Rd
d956f79b84661b7bf78c21a1f1311364 *man/plotDistribution.Rd
9feb288b32972adafd6a1714180a2400 *man/plotFit.Rd
1664653e267974073c0eeb6eed5ad6e8 *man/plotFreq.Rd
7b2a957e53583fcd6c8395fb5b554dca *man/plotParam.Rd
c3438947f69e31aefff2535b4d5fd1cb *man/plotPrior.Rd
34df63ba51a325abe09bf9651277d7a2 *man/plotPriorPost.Rd
5e5143b594f4d1489fd9d000e942ea42 *man/posteriorPredictive.Rd
5b20d76250dbac120c4b170fd53a4cc6 *man/priorPredictive.Rd
220cd481b7c324ee1905714351b18ba4 *man/probitInverse.Rd
d2651342ba7870640d3bc4da45cd1a2a *man/readEQN.Rd
65f8f02380eb4d75beed23b6dde478a3 *man/simpleMPT.Rd
80334baaba5345034119d706242dce9d *man/summarizeMCMC.Rd
221feedcf96c5ac82ecbcf5ceb3287b1 *man/summarizeMPT.Rd
7075dd6185388cdc4b495c228aa75089 *man/testHetChi.Rd
05393aeaf6740fc78eb7af2946522ab2 *man/testHetPerm.Rd
4ba749288cb831cfc8d458848cfb5816 *man/traitMPT.Rd
21036aed9c1655742e889ca240f3ee75 *man/transformedParameters.Rd
5e6dab7fa79d7e1c5a6777775f6d1019 *man/withinSubjectEQN.Rd
2a6f9e9e044a78154d3cfda5936d6f48 *src/Makevars
3a214e4bac0fbfc890f786b98b7af501 *src/RcppExports.cpp
c101c2e38a168d67bf55ebe44c928a2b *src/betaMPT.cpp
36fb7d6cbcb3b4a848fb1b0586803b07 *src/init.c
a34ce7c6b1a02949b611b62fceeca759 *src/loglikMPT.cpp
3cd4ae2b745a244c81a09946f6d340fe *tests/testthat.R
bdc50a24c61bd0743d8376ce630568ed *tests/testthat/test_fitModelCpp.R
756d9235fad942fee34a529aaa49aa56 *tests/testthat/test_genMPT.R
358f8f32b9aac7808cdcd504880e053e *tests/testthat/test_readEQN.R
ac3fa030761c52a63ae1195498a032dd *vignettes/Heck_2018_BRM.pdf.asis
d213cc86f248e54706275312b0a41caa *vignettes/TreeBUGS_1_intro.Rmd
82cb31abaf8978cd85f8d366179580f4 *vignettes/TreeBUGS_2_extended.Rmd
