b3ad453d57118e97acd3b496cf2453d1 *DESCRIPTION
6b291fd0fe877f08010aef2ef2572fd9 *LICENSE
4c7bcb3a8f04c151dedc6c2870687943 *NAMESPACE
9768813d6a8d8f0d233ba5da93f67a1e *R/combat_helpers.R
9db8a2e63de6fc0621b40bd92425968a *R/get_discordance_thold.R
f88eb2da9a81870e945c07d54f3caa7a *R/get_long_data.R
5e9d1afeebd8ed7a37da09ea9e18d1d1 *R/get_otsu_tab.R
124903b48a74ce6529ecfa3ff44362b7 *R/get_umap_data.R
1d1521b271c0ea942a57b90274d5666c *R/get_umap_reduction.R
741d8eb0d8d2335f5cedba2efde789f7 *R/get_var_data.R
b9902b297425b30b93a58182a015721a *R/get_var_proportions.R
8eff5e9942d66d670f03109b0c05679b *R/global.R
b6b8cf42924cdc5b285a05928042ba9e *R/mx_dataset.R
cd27a39f3945c503b4d899877dc567c7 *R/mx_normalize.R
483887e338b4217d0752e692d06369f9 *R/mx_sample.R
f72f6c4ceb36c80998c5eeb3bae7bcd5 *R/new_mx_dataset.R
b70f2b3e371bed97a37e9f49bd1b75c8 *R/normalize_mx_combat.R
baccfe7247b9f2ad95f1013e18c82064 *R/normalize_mx_dataset.R
81eb1cfdba06423ed3ed464f6318f25e *R/normalize_mx_registration.R
957122f6a28cb0407c8070473f502c1e *R/otsu_helpers.R
e35d7f250039b51bee02041c560e5bc1 *R/otsu_mx_dataset.R
9f5b14d495af75b1d5c62780b4e2fe93 *R/otsu_mx_discordance.R
b9635d38e3a17118d5d49c319115dea0 *R/plot_mx_density.R
3e099c6841fd571407a707a4c64973b7 *R/plot_mx_discordance.R
21e260cb9884e5de359d1b0d96900e78 *R/plot_mx_proportions.R
9fae7ce59e50b82beb680ac1fc18944a *R/plot_mx_umap.R
f6a69a78e397637b8bc4316e9e4c8c98 *R/registration_helpers.R
2db8b260a9e17842632a2cfb538b09b1 *R/run_otsu_discordance.R
ebd96fa92cca62408345fa4d1647f2b1 *R/run_reduce_umap.R
8d2bc1f4bd88a4d4b36cec6293e2d09f *R/run_var_proportions.R
3ce32934a1ca8d856136ecf516c82f9a *R/summary.R
c6b399d61419e11a3836fd983dd014ee *R/transform_mx_dataset.R
878f34ff541eb0c129d76cc853f72988 *R/trim_dataset.R
356809f62a9399318ebb13f65f122c58 *R/utils-pipe.R
d7c8c2e0089434488fa6057b32405dc4 *R/validate_method_override.R
69361e7d6c3809bbbac4a8d14eab98d8 *R/validate_mx_dataset.R
a4490f1598eee1aa04dcadbc7ef54edb *R/validate_mx_normalize_params.R
e508d920824c99136e8f3d5820e98744 *R/validate_otsu_discordance_params.R
00d06a912fc3882fd24e81acbfb3fa25 *R/validate_reduce_umap_params.R
3c8aeef30e8411724a057bbed752129a *R/validate_threshold_override.R
8723b199bb7972d2e7de1ba237bf136f *R/validate_var_proportions_params.R
635973a2a59e549b49869b600d302252 *README.md
350688162c62604f6c2f265de4ae5749 *build/vignette.rds
e2d6069c5fa3f217ecfc598ae8e28feb *data/mx_sample.rda
8e0b8cea78665042b9cd2599a1eae7e8 *inst/doc/mxnorm-vignette.R
5b962268de3ac690c91e6dbbb19ab4ea *inst/doc/mxnorm-vignette.Rmd
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1c499224cc0498525d65d03936d23697 *man/figures/README-mx_dens-1.png
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a1fc7735862daed5bb725aaf3fd1b883 *man/mx_dataset.Rd
d596f0ec1c60f647db9dfff9d6ddea4d *man/mx_normalize.Rd
7331031699d5d48d998f2797c5b3faad *man/mx_sample.Rd
b2190a6b169b1857a0f764f1869aff5c *man/plot_mx_density.Rd
4db3f5cba4ef1703026ef9e1bea591c2 *man/plot_mx_discordance.Rd
61f58622fd3f457b9e743cd49dc7275c *man/plot_mx_proportions.Rd
b2fdd49d85304fce14af6a13a3313ca9 *man/plot_mx_umap.Rd
420e3f30254e7cf5c47379b419199e77 *man/print.summary.mx_dataset.Rd
dfd27d0fd58a439391c5a0b1179dcf19 *man/run_otsu_discordance.Rd
ffaa6ed05a1fdb2825c60a312e2b7831 *man/run_reduce_umap.Rd
3144179659d7ba71f8df6b7e110f6415 *man/run_var_proportions.Rd
e87a127cd71f037214923bf227ad5e19 *man/summary.mx_dataset.Rd
11c609d5f8d4567949bffcb28d9cd1c9 *tests/testthat.R
50f4b6350e60ca11ca9a3947f07e57e5 *tests/testthat/test-mx_dataset.R
8c3d75884b109ad8f11d7bc9b593a99d *tests/testthat/test-mx_normalize.R
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6167c659c13d06c3ec66bc62a5680004 *tests/testthat/test-plot_mx_discordance.R
61d77111e1e4ec61dc9242f4cd9fc87d *tests/testthat/test-plot_mx_proportions.R
3410b4f1aa81149e26fa9a4d7b164290 *tests/testthat/test-plot_mx_umap.R
aae06f9fcacadd10ee5f486c926e5dc3 *tests/testthat/test-run_otsu_discordance.R
d9bc0e2fe14258878d6de8d522bb5765 *tests/testthat/test-run_reduce_umap.R
20f8967ad197ba3e1c446ff2122832d4 *tests/testthat/test-run_var_proportions.R
5b962268de3ac690c91e6dbbb19ab4ea *vignettes/mxnorm-vignette.Rmd
0b3758d0acd7d5ce590ef52300f2dd92 *vignettes/mxnorm_structure.png
c1d614d1e13b7d55e99f4288045e90ba *vignettes/mxnorm_vcitations.bib
