125e3951cce24c00fb63bb6da6120628 *DESCRIPTION
520c9e63413522fd8ba5bb4e4e50b17b *LICENSE
6ac689993f6b2f907a848159c9135823 *NAMESPACE
122d572dcd5915ce23fc2740d9516918 *NEWS.md
ba776118f4ee8e2462c7a1a9a0e3f7f6 *R/RcppExports.R
c79e345b6fe502187ee52e0e21186a51 *R/confband.R
d22fce2f86146f6aa32dc6e9d9b8e7de *R/cv_estimate_rt.R
017c8fd66a3f04d43df5d0e07f78bdbc *R/data.R
1dee52f0117546fc10e0fb60f88c6173 *R/delay_calculator.R
4c572302aada7e07389126ceb3efad83 *R/discretize_gamma.R
8444d6fd1e0df57c44295189e8ba7926 *R/estimate_rt.R
096425e4c54b609f1d1d10e0634d9f77 *R/fast_convolve.R
6c5fdb9c48becebbe5cd0be62968a30d *R/find_knots.R
17bb123964057b839a42eda1c3da214b *R/import-standalone-purrr.R
b34eb02ba8669baea0feffe49f848227 *R/interpolate_lambda.R
be6e605a00da8b673ef2b3b5890e65cb *R/interpolate_mat.R
861cd8608344776a2d614176e4e76e31 *R/interpolate_rt.R
eba278132c8a788b216a4410d190f7ce *R/methods-cv.R
e1f98f4dc26584438426dd94a05fb029 *R/methods.R
9137a07751e24de6685bd348bf4569bc *R/period.R
f0e1a590d8f841f28a28c66257fa05e6 *R/rtestim-package.R
563088df7b86a14ced62a83b331e3c7b *R/utils-enlist.R
ed2b83aef619f5b2d0f7bb0bf872a2c0 *README.md
b52aabe9a2757fc86742763db9dafc9b *build/partial.rdb
815a6df55b6e915ded9227e774ab7459 *build/vignette.rds
18b8eca8164193abc6edffde46d53435 *data/cancovid.rda
b20297a7ac7ec706c0c8114b40181dda *inst/doc/delay-distributions.R
d70c23233a55c9b9200f540a8d39fa16 *inst/doc/delay-distributions.Rmd
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5d9a64e4ea52d8e259244a00a52f68d1 *inst/include/rtestim.h
6e0107d2864af081d68e2b6608ded719 *inst/include/rtestim_RcppExports.h
08e448640bbbb727829fd4ff1f8aeb94 *inst/logo/logo.R
e8154dc448226152582e1d143d552c9e *man/cancovid.Rd
9f680ed451de5bf3653caf9d9a112863 *man/confband.Rd
41af612c20f2e945f0e9bddf1d8dc514 *man/configure_rt_admm.Rd
b775e6df58ebf388621e0c6a54aceaa2 *man/cv_estimate_rt.Rd
0e0f6fc6efc45d76f737f60a63afe668 *man/delay_calculator.Rd
df7f6de1dedaabae363400b00d6dfc48 *man/discretize_gamma.Rd
1d089090f4a939f091ffb0a700215d0e *man/estimate_rt.Rd
038ddce0a82a2fb5150113d4f3ac4ed0 *man/figures/README-cv-estimate-1.png
effbb32c1a2ad3e39897f844e1839c5e *man/figures/README-full-fit-1.png
70b4a196ee28a118401a98e3317908aa *man/figures/README-plot-data-1.png
bde983f8533fc4b96fd9c7cbc6ef0a31 *man/figures/logo.png
b1558f8586468ac0c38a07d69cf593ea *man/fitted.cv_poisson_rt.Rd
f982786d1e73eb2f5ced93c37215fbd1 *man/interpolate_rt.Rd
2ffec3a3135cc1e9d71e917710838855 *man/plot.cv_poisson_rt.Rd
ca3e1909f5c3e599a10f1897223b517d *man/plot.poisson_rt.Rd
171ca480ae4817e075480b40b76e8d34 *man/plot.rt_confidence_band.Rd
49146c3c65b5be77642c043bab8ecdb9 *man/predict.cv_poisson_rt.Rd
35cdf7af4a3891aa66c59f253d9ca779 *man/predict.poisson_rt.Rd
1d2353babacb6eac9e1195a07185d78a *src/RcppExports.cpp
92dd736acd179d6e9fd69ee8c1ef8203 *src/admm.cpp
67eac07250148af251b2434aafbf651f *src/admm.h
5ea586ca3101a462197dd75a38886d83 *src/dptf.h
1b7860c9ac5a04e54a8b4dcb5d720c09 *src/rtestim_path.cpp
d07595c6d24add400140b4916995d068 *src/tvdz.cpp
bdd2a5d086e35e30942e607ff1de4877 *src/utils.cpp
8f6b72cfc9226c492a5d9dffbe1b7c6a *src/utils.h
a72cf878957f72d5a39310a0eae1cf87 *src/wtvdz.cpp
c8b5ba117706a6d48bde6d4eb0b883a8 *tests/testthat.R
ddf87497a9d50294531d575b64f39599 *tests/testthat/test-create_lambda.R
1130eb6a7cc4dace6eb89d20cc27d28b *tests/testthat/test-cv.R
49914a958b99b89c577b16f8461d2d8b *tests/testthat/test-delay_calculator.R
752cd706d8ed7fa8565b93ac1e4f32fb *tests/testthat/test-dmat.R
2cd55cbee2d2af5b78c45b9538afea36 *tests/testthat/test-estimate_rt.R
ddff1999e91386219103b14a63869432 *tests/testthat/test-fast_convolve.R
33a82aaf72831e34cf7ddff6086864f0 *tests/testthat/test-fitted.R
2e05d27d1f7fe1b139652a1e44b82e27 *tests/testthat/test-gcd.R
3f32b6848628b014f2051dfb1d0dd7d7 *tests/testthat/test-interpolate_lambda.R
65eee9f47a451ccaa26f28a2b62b8f02 *tests/testthat/test-interpolate_mat.R
620e6cdedf0ea73c8a855c50b5e8d297 *tests/testthat/test-period.R
42e079c9ce11d6de34fbece27b361d73 *vignettes/backer.csv
90eb7df84117640e0aebf398ba8329a8 *vignettes/delay-distns-byvar.rds
d70c23233a55c9b9200f540a8d39fa16 *vignettes/delay-distributions.Rmd
5829b0848bc73c96610fa94d7445269f *vignettes/duotang-counts.rds
e9fd5f956110e20f89cf19f53757ae3f *vignettes/rtestim.Rmd
d655e88dbf19d119d4f696cb3e89a99d *vignettes/xu-etal-DATA_RAW.xlsx
