95dfaf6426827c226f89c76e2601fbbd *DESCRIPTION
d66d290f5abd059100c483e17c14431d *LICENSE
c3a9c111b3eb7bf8d644c3079aa352e4 *NAMESPACE
f01939107dd8d14406c7ba1c4040011d *NEWS.md
1b54137d4ae82b40a266122de6d1201b *R/DiveR-package.R
5b63bf4c5e8c2d47b52f63c4a884b1e4 *R/concat_conserved_kmer.R
e12a34d2db15e00f7d6e91a43289b822 *R/json2csv.R
85c459b7b1f3e0082139609846ded830 *R/metadata_extraction.R
a428ddbd86546550c65310e5023a9127 *R/plot_conservation_level.R
57ec82724156c5a92ec58d1b2a480e20 *R/plot_correlation.R
9af1712f2e0b045cb857d1e5499e0d86 *R/plot_dynamics_protein.R
9d716d08f9a3ee5a3be4ea12cd2a7470 *R/plot_dynamics_proteome.R
678fbb9a1e0a8e43ea2178b122dbbfc1 *R/plot_entropy.R
2c11ebff4025fb436d6606c553903bc8 *R/plot_time.R
a55e1de9058265b6448f8c54380a9c84 *R/plot_world_map.R
8fd47dc67771fdefd3be70db3ffa6546 *R/sample_data.R
eb940f3b50acc8ab43643fdba62ce5f1 *README.md
62b66209c063aa851aedb5ad64fbc7d4 *data/JSON_sample.rda
bd8962ecc600c91148820600ed78bfb5 *data/metadata.rda
7ab66b3fd68653c57318bfa2a6a0aedc *data/protein_2hosts.rda
a85ebef45d53feaa71932f4126c88937 *data/proteins_1host.rda
498491b0c5a756e5994f5ffba188f9d5 *inst/extdata/GISAID_EpiCoV.faa
186c67564ef6930f789b346c06413f45 *inst/extdata/NCBI_Protein.faa
db6e589855598f46e44fc7b7adfacd22 *inst/extdata/city_mapper.csv
8da75a81de31885d7037d20adc8b4fbe *man/JSON_sample.Rd
ad6d43cd4ef667f204765123edba525d *man/concat_conserved_kmer.Rd
5084e7481193869e079faa907b0972a0 *man/extract_from_GISAID.Rd
a79d958b82d0b0b21a0010315b9906a2 *man/extract_from_NCBI.Rd
bc8f755b926f2543f400dd8bfa502ca4 *man/figures/vdiver_overview_chart.png
452f52300a9e828878946a90f6d9943c *man/json2csv.Rd
2ee061dd70aef42ee14ce54db780c81d *man/metadata.Rd
a466c65b6d00cd4e2a0bf304f2c76720 *man/metadata_extraction.Rd
7bdf952d639ba3090cacf479eeb998d1 *man/plot_conservation_level.Rd
4db6b5991780edec0953efd51525328d *man/plot_correlation.Rd
3000ba13ee25101dfb9b2671fd3ae448 *man/plot_dynamics_protein.Rd
553f669a68d82172ccda509d837e1ce5 *man/plot_dynamics_proteome.Rd
b795493c4d006981f83fc1b4002c0d67 *man/plot_entropy.Rd
ed3520325c8d014e3fa391ce479e90f6 *man/plot_time.Rd
640d09263d1d5b5d003718243a411503 *man/plot_world_map.Rd
7bb89f9fa8ef22647479c0dc7739fffd *man/protein_2hosts.Rd
b94c00bf15d275320595e0de5c24f094 *man/proteins_1host.Rd
a0f41c3fa78837a65c705bfdc0750218 *man/vDiveR-package.Rd
dddfad8b6444fedb6cd81255a91e9755 *tests/testthat.R
ae747be12da0311254f004c19d864914 *tests/testthat/test-concat-seq.R
96053d6e4c607bfb9bb9b0c90e69a7fa *tests/testthat/test-json2csv.R
