Acuna
AlleleTable
Allelic
Allendorf
anonymization
API's
AppDriver
auth
backfills
Bakker
BG
BJL
Ballou
Bhatia
Bioinformatics
bioinformatics
browsable
callout
caveated
CEPH
CERVUS
chrom
CICD
CIWD
CLI
cM
CMD
Ceballos
Chesser
Cifuentes
Cockerham
Codecov
Codecov's
ColonyManagerTutorial
commit's
corrigendum
Cramer's
CRAN's
Curation
cutover
DDR
discoverable
dismissable
dizygotic
DOM
Doxiadis
Dprime
DT
Daly
Danecek
Deidentified
Displaymode
duplicateToReal
dyad
EHR
eqns
errored
ErrorTab
ExamplePedigree
Excoffier
facto
Ferreira
FG
FJS
fRoh
FST
Foose
Fst
fst
GBS
GV
GeneKeepR
Gilpin
Groot
Gst
handoff
handoff's
hardcoded
Hedrick
Hedrick's
Heijmans
HEVL
histocompatibility
HLA
IACUC
IBD
ICAR
Immunogenetics
Inb
indivMeanKin
ISAG
js
js's
JW
JZV
Joanes
Jonquera
Joshi
Kalinowski
Kanthaswamy
Kimura
Kinships
Kruuk
LabKey
LabKey's
Lange
LD
learnings
Lewontin
linkedDateShift
LOD
lowPower
makePedigreeMatingLayout
matings
Maller
markerMeanKin
MAXGROUPS
Mazas
Meagher
merge's
md's
MIS
MISs
MJ
MacBook
MacCluer
Macaca
Maddison
Manichaikul
Meirmans
Metzger
modularize
monozygotic
Mychaleckyj
MZ
Neale
NHP
NIHMS
Nei
Nei's
nLociUsed
Nonrestricted
nSegments
nUsed
Okabe
onboarding
ONPRC
ONPRC's
ONPRC’s
operationalized
operationalizes
orchestrator
ORCID
ORIP
outbreeding
overridable
PEDSYS
Pemberton
pkgdown's
PLINK
PLINK's
PMC
PMx
Pollak
pos
POSIXct
Pearson
Ped
PedAlleles
PedTree
PedigreeSampling
Pedscope
Pedscope's
Ph
Pre
prefilled
Primatology
QC'd
QDN
QP
radix
RData
README
reconstructable
reimplementation
RHUB
RNGkind
ROH
RQ
RStudio
Rbuildignore
Rdoc
Reformats
Rectilinear's
Rhub
Rlabkey
Rmd
Rouweler
Roychoudhury
runnable
scriptable
sha
shas
shinyBS
shinytest
sibship
SIMWALK
Sklar
SNPRC
Sankararaman
Schaid
Sinauer
Sinnwell
Slatkin
Solberg
Sortable
Springer
STR
subplan
subplan's
Sys
TJ
Therneau's
Therneau’s
totalRohLength
Tsai
tunable
UI
UIDs
uncalibrated
unchecking
Unchecking
unconfigured
undeleted
underpowered
unmutated
unretrievable
unshaded
unwired
UZ
VCF
VCF's
VCFtools
Vandeberg
Vectorized
vis
Vn
Vos
walkthrough
Walkthrough
walkthrough's
waypoint
WG
XARCH
YYYY
YYYYMMDD
addGenotype
addIdRecords
al
alleleFreq
allelic
ancestryCoverage
ancestryRule
ancestryRules
ancestrySeverity
ancestryStatus
autosome
backcross
baseUrl
biallelic
birthdate
bottlenecked
bp
BQ
buildMarkerGenotypeMatrix
byID
caTools
calculateSexRatio
CGD
CGS
changedCols
checkChangedColsLst
checkCrossCenterMapping
checkErrorLst
checkLinkageMarkerGenotypeFile
checkLocusMetadata
checkMarkerGenotypeFile
checkRequiredCols
checkTwinRelations
checkable
ci
coeficient
coeficients
collaterals
colorIndex
columm
columms
comparator
computable
computeGenomicROH
config
containes
convertSexCodes
countKinshipValues
countLoops
cran
createExampleFiles
createPedTree
createSimKinships
csv
curation
currentGroups
damBirth
damGu
damIndivMeanKin
datatable
datetime
de
deduplicated
deidentified
demoPed
designators
deterministically
diag
diagramData
dir
dontrun
donttest
droppable
dropdown
duplicateIds
edgeStyle
edu
erroring
errorLst
et
exampleNprcgenekeeprConfig
examplePedigree
expectConfigFile
failedDatabaseConnection
fallbacks
FC
femaleFounders
femaleSires
FGD
fillBins
fillGroupMembers
fillGroupMembersWithSexRatio
finalRpt
findLoops
fixColumnNames
focalAnimals
focals
folderPath
founderIds
fromCenter
fromcenter
FS
funder
gapless
gdata
geneDrop
genotypeMatrix
getAnimalsWithHighKinship
getBreederPed
getChangedColsTab
getConfigFileName
getDatedFileName
getEmptyErrorLst
getErrorTab
getFocalAnimalPed
getGenotypes
getGVGenotype
getIdsWithOneParent
getIndianOriginStatus
getLkDirectAncestors
getPedDirectRelative
getPedigree
getPotentialParents
getProductionStatus
getProportionLow
getPyramidPlot
getSexRatioWithAdditions
getSiteInfo
getVersion
ggplot
github
groupAddAssign
groupMembers
groupmates
grpNum
gu
guIter
guThresh
hasBothParents
hasChangedCols
hasErrors
HB
HC
HD
herm
heterozygosity
heterozygote
heterozygous
hh
highlightNearest
homozygosity
homozygote
homozygotes
homozygous
hovertext
http
https
HU
hyb
idA
idB
idsUsed
initialisms
invalidDateRows
invalidIdChars
iter
jap
jmac
kValue
kValues
kindepth
kinships
kmat
kurtosis
labkey
lifecycle
linebreeding
lintr
LK
lowParentAge
lubridate
LW
magrittr
makeExamplePedigreeFile
makeGeneticDiversityDashboard
makeGroupNum
makePedigreeDiagramData
maleDams
maleFounders
mapIdsToObfuscated
markerExpectedHeterozygosity
markerFst
markerKinship
markerLdBlock
markerObservedHeterozygosity
markerParentageExclusion
markerParentageLikelihood
markerRealizedRelatednessVariance
matriline
maxGestationalPeriod
maxKinship
md
meanGU
meanKinship
meanMK
mendelian
mgp
mhc
minAge
minDamAge
minKinship
minParentAge
minSireAge
misidentification
misrecorded
missingColumns
mk
modInput
modularized
monomorphic
mulatta
multiallelic
nAnimals
na
ncol
nd
netrc
nprc
nprcgenekeepr's
nprcgenekeeprErr
nprcgenekeeprGV
nprcmanagGV
nprcmanager
nrow
numGp
obfuscateDate
obfuscateId
obfuscateLdBlocks
obfuscatePed
obfuscateTwinRelations
outputing
ovariectomy
overriddenRules
parentages
parseable
pdepth
ped
pedA
pedB
pedDuplicateIds
pedFemaleSireMaleDam
pedGood
pedInvalidDates
pedMissingBirth
pedNum
pedOne
pedSameMaleIsSireAndDam
pedSix
pedWithGenotype
pedWithGenotypeReport
pedigreeFile
pgp
pkgdown
pluggable
png
populationIds
positionally
pre
prefill
prepopulated
probands
pseudorandom
ptree
px
qcBreeders
qcPed
qcPedGvReport
qcResult
qcStudbook
queryName
rbindlist
reactives
readExcelPOSIXToCharacter
readTwinRelations
recordStatus
recordkeeping
removeDups
removeEarlyDates
removeUnknownAnimals
reportChanges
reportErrors
reportGV
reportMatePairs
req
reselect
resetPopulation
resolveCrossCenterIds
resubmission
retentions
retune
rhesusGenotypes
rhesusPedigree
rlang
rmsharp
rmsutilityr
routings
roxygen
rpt
runGeneKeepr
saveDataframesAsFiles
sb
schemaName
sdKinship
selectRows
selectable
setPopulation
severities
sexCodes
sexRatio
sexRatioWithAddions
simParent
sireAge
sireAndDam
sireBirth
sireGu
sireIndivMeanKin
skewness
smallPed
smallPedTree
sortable
spf
sprintf
ss
subfields
supersession
suspiciousParents
svg
tabpanel
testthat
textarea
textshaping
therneau
toCharacter
toolset
transactional
travis
trimPedigree
trimmedGeneticValue
trimmedPed
tryCatch
twinRelations
txbiomed
ui
uitpInput
un
ungated
ungenotyped
uninterpretable
unphased
untyped
updateProgress
validator
validator's
vasxOvx
vectorized
vger
visNetwork
visNetwork's
withKin
wkbk
www
xls
xlsx
xtables
yaml
yml
zygosity
vermillion
invalidPlaceholderRows
colname
ignoreHerm
unanchored
drawPedigreeDiagram
appendColonySnapshot
backfillColonySnapshots
calcSnapshotDeltas
checkSnapshotHistory
comparabilityFlag
createColonySnapshot
existingHistory
membershipRule
nLiving
nPlacedByOffspring
nPossiblyAlive
pctDamKnown
pctSireKnown
plotSnapshotTrends
previewBackfillSupport
readSnapshotHistory
bitSize
checkMhcHaplotypeFile
idList
idTrimmed
isRare
kinshipMatrix
maxBits
mhcHaplotypeCarriers
mhcHaplotypeFrequency
noninform
nUncertain
obfuscateMhcHaplotypes
rareCarrierThreshold
rareFrequencyThreshold
reportAncestryViolations
shrinkPedigree
unavail
