Package: seam
Title: Sparse Extended Analysis of Modules
Version: 0.1.0
Maintainer: Marketa Barac Makarova <marketa.makarova@mail.muni.cz>
Authors@R: c(person(given = c("Marketa", "Barac"),
                      family = "Makarova",
                      role = c("aut", "cre"),
                      email = "marketa.makarova@mail.muni.cz"),
               person(given = "Jan",
                      family = "Kolacek",
                      role = "ctb"))
Description: Provides tools for comparing groups using sparse principal
    component analysis (SPCA). Includes functions for identifying and
    visualizing influential variables, assessing variable selection
    stability through bootstrapping, and exploring associations with
    clinical traits. SPCA is implemented using the method described in
    <doi:10.1198/106186006X113430>.
License: MIT + file LICENSE
Encoding: UTF-8
Depends: R (>= 4.1.0)
Imports: dplyr, elasticnet, ggplot2, graphics, rlang, stats, tidyr
Suggests: spelling, testthat (>= 3.0.0)
Config/testthat/edition: 3
NeedsCompilation: no
Packaged: 2026-10-23 20:45:45 UTC; makar
Author: Marketa Barac Makarova [aut, cre],
  Jan Kolacek [ctb]
URL: https://github.com/marketa-makarova/seam
BugReports: https://github.com/marketa-makarova/seam/issues
Config/roxygen2/version: 8.1.0
Language: en-US
Repository: CRAN
Date/Publication: 2026-11-07 16:20:02 UTC
