Last updated on 2025-09-11 15:49:23 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.0.1 | 19.51 | 173.90 | 193.41 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.0.1 | 13.40 | 122.68 | 136.08 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.0.1 | 299.80 | ERROR | |||
| r-devel-linux-x86_64-fedora-gcc | 1.0.1 | 294.14 | ERROR | |||
| r-devel-windows-x86_64 | 1.0.1 | 21.00 | 169.00 | 190.00 | OK | |
| r-patched-linux-x86_64 | 1.0.1 | 18.84 | 161.68 | 180.52 | OK | |
| r-release-linux-x86_64 | 1.0.1 | 18.32 | 159.07 | 177.39 | OK | |
| r-release-macos-arm64 | 1.0.1 | 86.00 | OK | |||
| r-release-macos-x86_64 | 1.0.1 | 125.00 | OK | |||
| r-release-windows-x86_64 | 1.0.1 | 21.00 | 162.00 | 183.00 | OK | |
| r-oldrel-macos-arm64 | 1.0.1 | 69.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.0.1 | 132.00 | OK | |||
| r-oldrel-windows-x86_64 | 1.0.1 | 25.00 | 214.00 | 239.00 | OK |
Version: 1.0.1
Check: examples
Result: ERROR
Running examples in ‘BiVariAn-Ex.R’ failed
The error most likely occurred in:
> ### Name: auto_bar_cont
> ### Title: Automatic barplot of continous variables
> ### Aliases: auto_bar_cont
>
> ### ** Examples
>
> data <- data.frame(group = rep(letters[1:2], 30),
+ var1 = rnorm(30, mean = 15, sd = 5),
+ var2 = rnorm(30, mean = 20, sd = 2),
+ var3 = rnorm(30, mean = 10, sd = 1),
+ var4 = rnorm(30, mean = 5, sd =2))
>
> data$group<-as.factor(data$group)
>
> # Create a list containing all the plots
> barcontplots<-auto_bar_cont(data = data, groupvar = 'group', err_bar = "se", lang_labs = 'EN')
Error in `ggplot2::scale_y_continuous()`:
! `limits` must be a vector of length 2, not length 3.
Backtrace:
▆
1. └─BiVariAn::auto_bar_cont(...)
2. └─ggplot2::scale_y_continuous(...)
3. └─ggplot2::continuous_scale(...)
4. └─ggplot2:::check_continuous_limits(limits, call = call)
5. └─ggplot2:::check_length(limits, 2L, arg = arg, call = call)
6. └─cli::cli_abort(msg, call = call, arg = arg)
7. └─rlang::abort(...)
Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc
Version: 1.0.1
Check: tests
Result: ERROR
Running ‘spelling.R’
Running ‘testthat.R’ [23s/30s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(BiVariAn)
>
> test_check("BiVariAn")
[ FAIL 3 | WARN 0 | SKIP 7 | PASS 119 ]
══ Skipped tests (7) ═══════════════════════════════════════════════════════════
• On CRAN (7): 'test-auto_shapiro_raw.R:64:3', 'test-continuous_2g.R:30:3',
'test-continuous_2g.R:87:3', 'test-continuous_2g_pair.R:55:3',
'test-dichotomous_2k_2sid.R:19:3', 'test-ss_multreg.R:2:3',
'test-step_bw_firth.R:5:3'
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-auto_bar_cont.R:10:3'): auto_bar_cont works ────────────────────
Error in `ggplot2::scale_y_continuous(limits = c(0, data_summary$mean_value +
5))`: `limits` must be a vector of length 2, not length 3.
Backtrace:
▆
1. └─BiVariAn::auto_bar_cont(...) at test-auto_bar_cont.R:10:3
2. └─ggplot2::scale_y_continuous(...)
3. └─ggplot2::continuous_scale(...)
4. └─ggplot2:::check_continuous_limits(limits, call = call)
5. └─ggplot2:::check_length(limits, 2L, arg = arg, call = call)
6. └─cli::cli_abort(msg, call = call, arg = arg)
7. └─rlang::abort(...)
── Error ('test-auto_bar_cont.R:32:3'): auto_bar_cont handle non default args ──
Error in `ggplot2::scale_y_continuous(limits = c(0, data_summary$mean_value +
5))`: `limits` must be a vector of length 2, not length 3.
Backtrace:
▆
1. └─BiVariAn::auto_bar_cont(...) at test-auto_bar_cont.R:32:3
2. └─ggplot2::scale_y_continuous(...)
3. └─ggplot2::continuous_scale(...)
4. └─ggplot2:::check_continuous_limits(limits, call = call)
5. └─ggplot2:::check_length(limits, 2L, arg = arg, call = call)
6. └─cli::cli_abort(msg, call = call, arg = arg)
7. └─rlang::abort(...)
── Failure ('test-auto_viol_cont.R:13:3'): auto_violin_cont works ──────────────
capture.output(violinplotlist$var1$layers[[1]])[1] (`actual`) not equal to "geom_violin: draw_quantiles = NULL, na.rm = FALSE, orientation = NA" (`expected`).
actual vs expected
- "geom_violin: na.rm = FALSE, orientation = NA, quantile_gp = list(colour = NULL, linetype = 0, linewidth = NULL)"
+ "geom_violin: draw_quantiles = NULL, na.rm = FALSE, orientation = NA"
[ FAIL 3 | WARN 0 | SKIP 7 | PASS 119 ]
Error: Test failures
Execution halted
Flavor: r-devel-linux-x86_64-fedora-clang
Version: 1.0.1
Check: tests
Result: ERROR
Running ‘spelling.R’
Running ‘testthat.R’ [21s/25s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(BiVariAn)
>
> test_check("BiVariAn")
[ FAIL 3 | WARN 0 | SKIP 7 | PASS 119 ]
══ Skipped tests (7) ═══════════════════════════════════════════════════════════
• On CRAN (7): 'test-auto_shapiro_raw.R:64:3', 'test-continuous_2g.R:30:3',
'test-continuous_2g.R:87:3', 'test-continuous_2g_pair.R:55:3',
'test-dichotomous_2k_2sid.R:19:3', 'test-ss_multreg.R:2:3',
'test-step_bw_firth.R:5:3'
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-auto_bar_cont.R:10:3'): auto_bar_cont works ────────────────────
Error in `ggplot2::scale_y_continuous(limits = c(0, data_summary$mean_value +
5))`: `limits` must be a vector of length 2, not length 3.
Backtrace:
▆
1. └─BiVariAn::auto_bar_cont(...) at test-auto_bar_cont.R:10:3
2. └─ggplot2::scale_y_continuous(...)
3. └─ggplot2::continuous_scale(...)
4. └─ggplot2:::check_continuous_limits(limits, call = call)
5. └─ggplot2:::check_length(limits, 2L, arg = arg, call = call)
6. └─cli::cli_abort(msg, call = call, arg = arg)
7. └─rlang::abort(...)
── Error ('test-auto_bar_cont.R:32:3'): auto_bar_cont handle non default args ──
Error in `ggplot2::scale_y_continuous(limits = c(0, data_summary$mean_value +
5))`: `limits` must be a vector of length 2, not length 3.
Backtrace:
▆
1. └─BiVariAn::auto_bar_cont(...) at test-auto_bar_cont.R:32:3
2. └─ggplot2::scale_y_continuous(...)
3. └─ggplot2::continuous_scale(...)
4. └─ggplot2:::check_continuous_limits(limits, call = call)
5. └─ggplot2:::check_length(limits, 2L, arg = arg, call = call)
6. └─cli::cli_abort(msg, call = call, arg = arg)
7. └─rlang::abort(...)
── Failure ('test-auto_viol_cont.R:13:3'): auto_violin_cont works ──────────────
capture.output(violinplotlist$var1$layers[[1]])[1] (`actual`) not equal to "geom_violin: draw_quantiles = NULL, na.rm = FALSE, orientation = NA" (`expected`).
actual vs expected
- "geom_violin: na.rm = FALSE, orientation = NA, quantile_gp = list(colour = NULL, linetype = 0, linewidth = NULL)"
+ "geom_violin: draw_quantiles = NULL, na.rm = FALSE, orientation = NA"
[ FAIL 3 | WARN 0 | SKIP 7 | PASS 119 ]
Error: Test failures
Execution halted
Flavor: r-devel-linux-x86_64-fedora-gcc