Last updated on 2025-09-11 15:49:41 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.0.6 | 54.64 | 445.34 | 499.98 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.0.6 | 38.58 | 313.65 | 352.23 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.0.6 | 805.37 | ERROR | |||
| r-devel-linux-x86_64-fedora-gcc | 1.0.6 | 766.40 | ERROR | |||
| r-devel-windows-x86_64 | 1.0.6 | 54.00 | 421.00 | 475.00 | OK | |
| r-patched-linux-x86_64 | 1.0.6 | 51.10 | 413.14 | 464.24 | OK | |
| r-release-linux-x86_64 | 1.0.6 | 50.43 | 425.87 | 476.30 | OK | |
| r-release-macos-arm64 | 1.0.6 | 126.00 | OK | |||
| r-release-macos-x86_64 | 1.0.6 | 291.00 | OK | |||
| r-release-windows-x86_64 | 1.0.6 | 55.00 | 416.00 | 471.00 | OK | |
| r-oldrel-macos-arm64 | 1.0.6 | 141.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.0.6 | 320.00 | NOTE | |||
| r-oldrel-windows-x86_64 | 1.0.6 | 70.00 | 566.00 | 636.00 | OK |
Version: 1.0.6
Check: examples
Result: ERROR
Running examples in ‘TransProR-Ex.R’ failed
The error most likely occurred in:
> ### Name: highlight_by_node
> ### Title: Highlight Nodes in a Phylogenetic Tree with Custom Fill Colors
> ### and Transparency
> ### Aliases: highlight_by_node
>
> ### ** Examples
>
> plot_file <- system.file("extdata", "tree_plot.rds", package = "TransProR")
> p2_plot <- readRDS(plot_file)
>
> # Please replace the following vectors with your specific values
> nodes <- c(117, 129, 125, 127, 119,
+ 123, 139, 166, 124, 131, 217) # x-values of the nodes you want to highlight
> fill_colors <- c("#CD6600", "#CD6600", "#CD6600",
+ "#CD6600", "#009933", "#009933",
+ "#009933", "#009933", "#9B30FF",
+ "#9B30FF", "#9B30FF") # Fill colors
> alpha_values <- c(0.3, 0.3, 0.3, 0.3, 0.2, 0.3,
+ 0.3, 0.3, 0.3, 0.3, 0.3) # Transparency values
> extend_values <- c(25, 24, 24, 25, 25, 25,
+ 24, 24, 25, 24, 24) # Values for the 'extend' parameter
>
> p2 <- highlight_by_node(
+ p2_plot,
+ nodes,
+ fill_colors,
+ alpha_values,
+ extend_values
+ )
Error in ggtree_object + layer : non-numeric argument to binary operator
Calls: highlight_by_node
Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc
Version: 1.0.6
Check: package dependencies
Result: NOTE
Package suggested but not available for checking: ‘ggtreeExtra’
Flavor: r-oldrel-macos-x86_64