CRAN Package Check Results for Maintainer ‘Kevin R. Coombes <krc at silicovore.com>’

Last updated on 2025-11-18 14:53:15 CET.

Package	ERROR	OK
BimodalIndex		13
ClassComparison		13
ClassDiscovery		13
CloneSeeker		13
CrossValidate		13
GenAlgo		13
integIRTy		13
Mercator		13
Modeler		13
NameNeedle		13
NewmanOmics		13
oompaBase		13
oompaData		13
PCDimension		13
plasma	1	12
Polychrome		13
PreProcess		13
RCytoGPS		13
RPointCloud		13
SIBERG		13
SillyPutty		13
SVAlignR		13
TailRank		13
Thresher		13
Umpire		13
WayFindR	1	12

Package BimodalIndex

Current CRAN status: OK: 13

Package ClassComparison

Current CRAN status: OK: 13

Package ClassDiscovery

Current CRAN status: OK: 13

Package CloneSeeker

Current CRAN status: OK: 13

Package CrossValidate

Current CRAN status: OK: 13

Package GenAlgo

Current CRAN status: OK: 13

Package integIRTy

Current CRAN status: OK: 13

Package Mercator

Current CRAN status: OK: 13

Package Modeler

Current CRAN status: OK: 13

Package NameNeedle

Current CRAN status: OK: 13

Package NewmanOmics

Current CRAN status: OK: 13

Package oompaBase

Current CRAN status: OK: 13

Package oompaData

Current CRAN status: OK: 13

Package PCDimension

Current CRAN status: OK: 13

Package plasma

Current CRAN status: ERROR: 1, OK: 12

Version: 1.1.5
Check: tests
Result: ERROR Running ‘test01-MO.R’ [8s/11s] Running ‘test02-fitCox.R’ [5s/65s] Running ‘test03-multiplePLS.R’ [9s/13s] Running ‘test04-plasma.R’ [11s/14s] Running ‘test05-interpret.R’ [10s/15s] Running the tests in ‘tests/test02-fitCox.R’ failed. Complete output: > library(plasma) > # Repeat basic stuff from first test > fls <- try(loadESCAdata()) Error in load(U, env) : cannot read from connection In addition: Warning message: In load(U, env) : URL 'http://silicovore.com/data/TCGA-ESCA.RData': Timeout of 60 seconds was reached > if (inherits(fls, "try-error")) { + stop("Unable to load data from remote server.") + } Error: Unable to load data from remote server. Execution halted Flavor: r-devel-linux-x86_64-debian-gcc

Package Polychrome

Current CRAN status: OK: 13

Package PreProcess

Current CRAN status: OK: 13

Package RCytoGPS

Current CRAN status: OK: 13

Package RPointCloud

Current CRAN status: OK: 13

Package SIBERG

Current CRAN status: OK: 13

Package SillyPutty

Current CRAN status: OK: 13

Package SVAlignR

Current CRAN status: OK: 13

Package TailRank

Current CRAN status: OK: 13

Package Thresher

Current CRAN status: OK: 13

Package Umpire

Current CRAN status: OK: 13

Package WayFindR

Current CRAN status: ERROR: 1, OK: 12

Version: 0.5.0
Check: package dependencies
Result: ERROR Package required but not available: ‘org.Hs.eg.db’ See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’ manual. Flavor: r-release-macos-arm64