Last updated on 2025-10-03 10:49:39 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 12.88 | 258.48 | 271.36 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 9.47 | 233.75 | 243.22 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 330.32 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 355.03 | OK | |||
| r-devel-windows-x86_64 | 1.1.4 | 21.00 | 190.00 | 211.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 15.26 | 285.36 | 300.62 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 15.01 | 267.16 | 282.17 | OK | |
| r-release-macos-arm64 | 1.1.4 | 102.00 | OK | |||
| r-release-macos-x86_64 | 1.1.4 | 175.00 | ERROR | |||
| r-release-windows-x86_64 | 1.1.4 | 18.00 | 189.00 | 207.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | 98.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.1.4 | 186.00 | ERROR | |||
| r-oldrel-windows-x86_64 | 1.1.4 | 24.00 | 241.00 | 265.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [80s/120s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.431, system: 0.043, elapsed: 1.719 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.690, system: 0.096, elapsed: 9.970 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.182, system: 0.012, elapsed: 0.196 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.648, system: 0.196, elapsed: 4.142 seconds]
Computing values for grid cells...
... done. [user: 0.159, system: 0.003, elapsed: 0.163 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.639, system: 0.370, elapsed: 16.756 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.431, system: 0.032, elapsed: 1.498 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.961, system: 0.127, elapsed: 20.147 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.183, system: 0.013, elapsed: 0.373 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.847, system: 0.206, elapsed: 6.352 seconds]
Computing values for grid cells...
... done. [user: 0.155, system: 0.004, elapsed: 0.168 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.126, system: 0.403, elapsed: 29.361 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.552, system: 0.049, elapsed: 1.780 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.888, system: 0.131, elapsed: 16.352 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.184, system: 0.013, elapsed: 0.377 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.801, system: 0.221, elapsed: 6.570 seconds]
Computing values for grid cells...
... done. [user: 0.168, system: 0.007, elapsed: 0.228 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.187, system: 0.234, elapsed: 1.214 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.395, system: 0.682, elapsed: 27.379 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.470, system: 0.044, elapsed: 1.899 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.805, system: 0.096, elapsed: 11.922 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.192, system: 0.012, elapsed: 0.295 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.674, system: 0.196, elapsed: 5.275 seconds]
Computing values for grid cells...
... done. [user: 0.168, system: 0.009, elapsed: 0.219 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.632, system: 0.832, elapsed: 18.580 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.595, system: 1.224, elapsed: 39.115 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [79s/122s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.490, system: 0.048, elapsed: 1.616 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.998, system: 0.228, elapsed: 11.971 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.184, system: 0.017, elapsed: 0.279 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.737, system: 0.277, elapsed: 5.946 seconds]
Computing values for grid cells...
... done. [user: 0.162, system: 0.006, elapsed: 0.196 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.094, system: 0.601, elapsed: 20.761 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.712, system: 0.089, elapsed: 2.333 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.946, system: 0.261, elapsed: 10.898 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.190, system: 0.017, elapsed: 0.322 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.709, system: 0.217, elapsed: 7.980 seconds]
Computing values for grid cells...
... done. [user: 0.164, system: 0.006, elapsed: 0.359 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.259, system: 0.624, elapsed: 22.805 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.625, system: 0.060, elapsed: 3.806 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.195, system: 0.313, elapsed: 15.710 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.186, system: 0.013, elapsed: 0.269 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.498, system: 0.197, elapsed: 5.801 seconds]
Computing values for grid cells...
... done. [user: 0.166, system: 0.012, elapsed: 0.280 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.041, system: 0.225, elapsed: 1.017 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.331, system: 0.859, elapsed: 28.070 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.501, system: 0.039, elapsed: 2.355 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.854, system: 0.102, elapsed: 14.449 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.182, system: 0.010, elapsed: 0.285 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.512, system: 0.163, elapsed: 6.222 seconds]
Computing values for grid cells...
... done. [user: 0.170, system: 0.004, elapsed: 0.260 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.156, system: 0.444, elapsed: 17.881 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.008, system: 0.787, elapsed: 42.463 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64