Last updated on 2025-11-16 12:49:35 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 11.86 | 248.50 | 260.36 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.94 | 219.32 | 230.26 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 33.00 | 275.91 | 308.91 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 26.00 | 332.49 | 358.49 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 25.00 | 189.00 | 214.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 14.43 | 249.95 | 264.38 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 14.55 | 304.46 | 319.01 | OK | |
| r-release-macos-arm64 | 1.1.4 | 6.00 | 96.00 | 102.00 | OK | |
| r-release-macos-x86_64 | 1.1.4 | 12.00 | 192.00 | 204.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 21.00 | 188.00 | 209.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | 6.00 | 92.00 | 98.00 | OK | |
| r-oldrel-macos-x86_64 | 1.1.4 | 11.00 | 204.00 | 215.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 26.00 | 230.00 | 256.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [87s/144s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.711, system: 0.089, elapsed: 2.319 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.798, system: 0.227, elapsed: 23.359 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.204, system: 0.018, elapsed: 0.614 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.107, system: 0.243, elapsed: 9.739 seconds]
Computing values for grid cells...
... done. [user: 0.182, system: 0.006, elapsed: 0.268 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.566, system: 0.616, elapsed: 37.490 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.610, system: 0.055, elapsed: 2.955 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.912, system: 0.299, elapsed: 15.833 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.205, system: 0.020, elapsed: 0.315 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.293, system: 0.324, elapsed: 6.255 seconds]
Computing values for grid cells...
... done. [user: 0.184, system: 0.010, elapsed: 0.260 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.778, system: 0.743, elapsed: 26.527 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.727, system: 0.080, elapsed: 2.279 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.032, system: 0.369, elapsed: 14.482 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.197, system: 0.012, elapsed: 0.377 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.867, system: 0.184, elapsed: 5.591 seconds]
Computing values for grid cells...
... done. [user: 0.188, system: 0.017, elapsed: 0.336 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.196, system: 0.247, elapsed: 1.339 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.878, system: 0.957, elapsed: 25.450 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.622, system: 0.053, elapsed: 3.069 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.557, system: 0.086, elapsed: 16.295 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.198, system: 0.011, elapsed: 0.367 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.903, system: 0.166, elapsed: 6.522 seconds]
Computing values for grid cells...
... done. [user: 0.181, system: 0.004, elapsed: 0.308 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.856, system: 0.472, elapsed: 18.673 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 26.989, system: 0.814, elapsed: 46.371 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [86s/147s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.769, system: 0.075, elapsed: 2.815 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.715, system: 0.223, elapsed: 16.823 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.200, system: 0.018, elapsed: 0.327 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.890, system: 0.255, elapsed: 6.036 seconds]
Computing values for grid cells...
... done. [user: 0.186, system: 0.012, elapsed: 0.288 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.325, system: 0.616, elapsed: 27.204 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.948, system: 0.107, elapsed: 2.983 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.974, system: 0.307, elapsed: 16.958 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.195, system: 0.012, elapsed: 0.299 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.870, system: 0.194, elapsed: 6.138 seconds]
Computing values for grid cells...
... done. [user: 0.166, system: 0.005, elapsed: 0.274 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.721, system: 0.661, elapsed: 27.523 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.718, system: 0.071, elapsed: 2.747 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.889, system: 0.294, elapsed: 16.910 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.200, system: 0.016, elapsed: 0.489 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.753, system: 0.192, elapsed: 6.116 seconds]
Computing values for grid cells...
... done. [user: 0.178, system: 0.007, elapsed: 0.291 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.123, system: 0.262, elapsed: 1.239 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.522, system: 0.879, elapsed: 28.855 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.649, system: 0.031, elapsed: 2.717 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.664, system: 0.070, elapsed: 18.077 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.201, system: 0.012, elapsed: 0.331 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.768, system: 0.181, elapsed: 7.286 seconds]
Computing values for grid cells...
... done. [user: 0.169, system: 0.004, elapsed: 0.415 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.683, system: 0.495, elapsed: 23.713 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 26.801, system: 0.816, elapsed: 53.761 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-x86_64