Last updated on 2025-09-12 03:50:21 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 14.26 | 245.61 | 259.87 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.52 | 224.70 | 235.22 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 336.39 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 408.21 | OK | |||
| r-devel-windows-x86_64 | 1.1.4 | 20.00 | 184.00 | 204.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 13.34 | 239.71 | 253.05 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 14.24 | 305.48 | 319.72 | OK | |
| r-release-macos-arm64 | 1.1.4 | 102.00 | OK | |||
| r-release-macos-x86_64 | 1.1.4 | 202.00 | ERROR | |||
| r-release-windows-x86_64 | 1.1.4 | 18.00 | 187.00 | 205.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | 98.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.1.4 | 211.00 | ERROR | |||
| r-oldrel-windows-x86_64 | 1.1.4 | 23.00 | 234.00 | 257.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [79s/128s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.539, system: 0.047, elapsed: 2.592 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.962, system: 0.105, elapsed: 14.914 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.190, system: 0.014, elapsed: 0.417 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.778, system: 0.189, elapsed: 6.255 seconds]
Computing values for grid cells...
... done. [user: 0.161, system: 0.003, elapsed: 0.258 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.177, system: 0.382, elapsed: 25.409 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.452, system: 0.036, elapsed: 2.291 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.963, system: 0.059, elapsed: 15.136 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.180, system: 0.012, elapsed: 0.314 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.702, system: 0.157, elapsed: 6.398 seconds]
Computing values for grid cells...
... done. [user: 0.162, system: 0.002, elapsed: 0.244 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.995, system: 0.284, elapsed: 25.230 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.502, system: 0.031, elapsed: 2.002 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.043, system: 0.070, elapsed: 14.715 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.187, system: 0.012, elapsed: 0.300 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.717, system: 0.188, elapsed: 6.144 seconds]
Computing values for grid cells...
... done. [user: 0.160, system: 0.003, elapsed: 0.302 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.124, system: 0.211, elapsed: 1.254 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.355, system: 0.538, elapsed: 25.724 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.517, system: 0.033, elapsed: 2.670 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.013, system: 0.050, elapsed: 14.880 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.185, system: 0.011, elapsed: 0.317 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.687, system: 0.167, elapsed: 6.487 seconds]
Computing values for grid cells...
... done. [user: 0.163, system: 0.003, elapsed: 0.283 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.356, system: 0.441, elapsed: 17.612 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.578, system: 0.733, elapsed: 43.398 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [78s/130s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.534, system: 0.043, elapsed: 2.444 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.945, system: 0.064, elapsed: 14.299 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.180, system: 0.014, elapsed: 0.333 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.628, system: 0.187, elapsed: 6.862 seconds]
Computing values for grid cells...
... done. [user: 0.163, system: 0.004, elapsed: 0.310 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.982, system: 0.333, elapsed: 25.204 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.483, system: 0.033, elapsed: 2.651 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.913, system: 0.056, elapsed: 13.716 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.183, system: 0.012, elapsed: 0.374 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.659, system: 0.171, elapsed: 6.678 seconds]
Computing values for grid cells...
... done. [user: 0.166, system: 0.006, elapsed: 0.335 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.951, system: 0.304, elapsed: 24.790 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.523, system: 0.031, elapsed: 2.480 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.057, system: 0.107, elapsed: 13.980 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.181, system: 0.010, elapsed: 0.254 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.604, system: 0.169, elapsed: 5.291 seconds]
Computing values for grid cells...
... done. [user: 0.172, system: 0.012, elapsed: 0.284 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.036, system: 0.235, elapsed: 1.041 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.182, system: 0.593, elapsed: 24.301 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.509, system: 0.033, elapsed: 2.564 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.032, system: 0.060, elapsed: 15.316 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.187, system: 0.012, elapsed: 0.559 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.512, system: 0.159, elapsed: 8.357 seconds]
Computing values for grid cells...
... done. [user: 0.176, system: 0.004, elapsed: 0.360 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.164, system: 0.435, elapsed: 18.577 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.226, system: 0.729, elapsed: 47.022 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64