Last updated on 2025-12-18 14:49:55 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 12.44 | 244.99 | 257.43 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.08 | 215.69 | 225.77 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 25.00 | 289.70 | 314.70 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 29.00 | 402.64 | 431.64 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 22.00 | 186.00 | 208.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 15.29 | 246.27 | 261.56 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 13.77 | 256.04 | 269.81 | OK | |
| r-release-macos-arm64 | 1.1.4 | OK | ||||
| r-release-macos-x86_64 | 1.1.4 | 10.00 | 166.00 | 176.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 21.00 | 187.00 | 208.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | OK | ||||
| r-oldrel-macos-x86_64 | 1.1.4 | 10.00 | 190.00 | 200.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 26.00 | 239.00 | 265.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [85s/116s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.494, system: 0.039, elapsed: 1.786 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.478, system: 0.076, elapsed: 13.506 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.191, system: 0.012, elapsed: 0.253 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.984, system: 0.209, elapsed: 5.182 seconds]
Computing values for grid cells...
... done. [user: 0.187, system: 0.007, elapsed: 0.221 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.887, system: 0.374, elapsed: 21.627 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.589, system: 0.045, elapsed: 2.059 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.559, system: 0.096, elapsed: 12.973 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.194, system: 0.010, elapsed: 0.293 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.943, system: 0.181, elapsed: 4.911 seconds]
Computing values for grid cells...
... done. [user: 0.176, system: 0.005, elapsed: 0.236 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.029, system: 0.380, elapsed: 21.209 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.548, system: 0.037, elapsed: 2.166 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.863, system: 0.222, elapsed: 13.519 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.211, system: 0.017, elapsed: 0.336 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.167, system: 0.281, elapsed: 7.041 seconds]
Computing values for grid cells...
... done. [user: 0.179, system: 0.009, elapsed: 0.316 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.272, system: 0.248, elapsed: 1.261 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.914, system: 0.865, elapsed: 25.790 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.666, system: 0.080, elapsed: 2.074 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.769, system: 0.247, elapsed: 13.615 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.195, system: 0.017, elapsed: 0.302 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.110, system: 0.269, elapsed: 6.847 seconds]
Computing values for grid cells...
... done. [user: 0.184, system: 0.007, elapsed: 0.279 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.948, system: 0.594, elapsed: 17.094 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 27.522, system: 1.246, elapsed: 41.157 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [84s/132s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.569, system: 0.037, elapsed: 2.883 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.513, system: 0.051, elapsed: 15.522 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.196, system: 0.012, elapsed: 0.397 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.749, system: 0.186, elapsed: 6.246 seconds]
Computing values for grid cells...
... done. [user: 0.184, system: 0.005, elapsed: 0.269 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.779, system: 0.319, elapsed: 26.288 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.588, system: 0.030, elapsed: 2.236 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.591, system: 0.063, elapsed: 14.594 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.194, system: 0.011, elapsed: 0.311 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.942, system: 0.218, elapsed: 6.801 seconds]
Computing values for grid cells...
... done. [user: 0.168, system: 0.005, elapsed: 0.295 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.051, system: 0.359, elapsed: 25.136 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.598, system: 0.043, elapsed: 2.661 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.723, system: 0.193, elapsed: 16.094 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.197, system: 0.014, elapsed: 0.358 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.907, system: 0.227, elapsed: 7.374 seconds]
Computing values for grid cells...
... done. [user: 0.185, system: 0.004, elapsed: 0.279 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.163, system: 0.265, elapsed: 1.050 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.441, system: 0.784, elapsed: 28.923 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.701, system: 0.050, elapsed: 2.314 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.698, system: 0.122, elapsed: 14.999 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.203, system: 0.012, elapsed: 0.316 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.820, system: 0.177, elapsed: 5.941 seconds]
Computing values for grid cells...
... done. [user: 0.172, system: 0.004, elapsed: 0.298 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.841, system: 0.483, elapsed: 17.038 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 27.117, system: 0.878, elapsed: 41.987 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-x86_64