Last updated on 2026-03-21 17:51:51 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.3.2 | 12.77 | 293.38 | 306.15 | OK | |
| r-devel-linux-x86_64-debian-gcc | 0.3.2 | 8.72 | 208.96 | 217.68 | OK | |
| r-devel-linux-x86_64-fedora-clang | 0.3.2 | 21.00 | 468.35 | 489.35 | ERROR | |
| r-devel-linux-x86_64-fedora-gcc | 0.3.2 | 19.00 | 459.90 | 478.90 | OK | |
| r-devel-macos-arm64 | 0.3.2 | 3.00 | 102.00 | 105.00 | OK | |
| r-devel-windows-x86_64 | 0.3.2 | 16.00 | 296.00 | 312.00 | OK | |
| r-patched-linux-x86_64 | 0.3.2 | 11.27 | 277.23 | 288.50 | OK | |
| r-release-linux-x86_64 | 0.3.2 | 11.66 | 275.66 | 287.32 | OK | |
| r-release-macos-arm64 | 0.3.2 | 3.00 | 101.00 | 104.00 | OK | |
| r-release-macos-x86_64 | 0.3.2 | 9.00 | 295.00 | 304.00 | OK | |
| r-release-windows-x86_64 | 0.3.2 | 15.00 | 296.00 | 311.00 | OK | |
| r-oldrel-macos-arm64 | 0.3.2 | 3.00 | 105.00 | 108.00 | OK | |
| r-oldrel-macos-x86_64 | 0.3.2 | 9.00 | 326.00 | 335.00 | OK | |
| r-oldrel-windows-x86_64 | 0.3.2 | 18.00 | 391.00 | 409.00 | OK |
Version: 0.3.2
Check: examples
Result: ERROR
Running examples in ‘mascarade-Ex.R’ failed
The error most likely occurred in:
> ### Name: generateMaskSeurat
> ### Title: Generates mask from a Seurat object. Requires 'SeuratObject'
> ### package.
> ### Aliases: generateMaskSeurat
>
> ### ** Examples
>
> # only run if Seurat is installed
> if (require("Seurat")) {
+ data("pbmc_small")
+ maskTable <- generateMaskSeurat(pbmc_small)
+
+ library(ggplot2)
+ # not the best plot, see vignettes for better examples
+ DimPlot(pbmc_small) +
+ geom_path(data=maskTable, aes(x=tSNE_1, y=tSNE_2, group=group))
+ }
Loading required package: Seurat
Loading required package: SeuratObject
Loading required package: sp
Attaching package: ‘SeuratObject’
The following objects are masked from ‘package:base’:
intersect, t
Warning in erodemask(w, r, strict = strict) : eroded mask is empty
Warning in erodemask(w, r, strict = strict) : eroded mask is empty
Warning in erodemask(w, r, strict = strict) : eroded mask is empty
Warning in FUN(X[[i]], ...) : Mask is empty for cluster 0
Warning in FUN(X[[i]], ...) : Mask is empty for cluster 2
Warning in FUN(X[[i]], ...) : Mask is empty for cluster 1
Error in setnames(borderTable, c("x", "y"), colnames(dims)) :
Items of 'old' not found in column names: [x, y]. Consider skip_absent=TRUE.
Calls: generateMaskSeurat ... generateMask -> setnames -> stopf -> raise_condition -> signal
Execution halted
Flavor: r-devel-linux-x86_64-fedora-clang