Last updated on 2026-01-18 12:51:48 CET.
| Package | ERROR | NOTE | OK |
|---|---|---|---|
| PKbioanalysis | 1 | 3 | 9 |
Current CRAN status: ERROR: 1, NOTE: 3, OK: 9
Version: 0.4.0
Check: tests
Result: ERROR
Running ‘testthat.R’ [149s/534s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(PKbioanalysis)
Attaching package: 'PKbioanalysis'
The following object is masked from 'package:stats':
integrate
>
> test_check("PKbioanalysis")
Plate not registered. To register, use register_plate()
Plate not registered. To register, use register_plate()
Plate not registered. To register, use register_plate()
Plate not registered. To register, use register_plate()
Plate not registered. To register, use register_plate()
Plate not registered. To register, use register_plate()
Plate not registered. To register, use register_plate()
Plate not registered. To register, use register_plate()
"My Plate" |> generate_96() |> add_blank(group = "A") |> fill_scheme(fill = "h") |> add_suitability() |> fill_scheme(tbound = 1, fill = "v")i Created study with ID: aaf29b0b-bebb-45e4-b0c5-b7461bb37b1a
i Adding dosing and subjects information...
v Dosing information added.
i Adding subjects information...
v Subjects information added.
i Adding sample log information...
v Sample log information added.
i Created study with ID: 98755640-2ab4-445a-9071-315b6e62353a
v Dosing information added.
i Adding subjects information...
v Subjects information added.
i Adding sample log information...
v Sample log information added.
i Created study with ID: c7bd63b3-e6b2-4108-8e8b-2920626ea3cc
v Dosing information added.
i Adding subjects information...
v Subjects information added.
i Adding sample log information...
v Sample log information added.
`geom_smooth()` using formula = 'y ~ x'
Saving _problems/test_quant_object-12.R
[ FAIL 1 | WARN 0 | SKIP 16 | PASS 103 ]
══ Skipped tests (16) ══════════════════════════════════════════════════════════
• On CRAN (10): 'test-apps.R:1:1', 'test-injec_list.R:8:3',
'test-injec_list.R:51:3', 'test-injec_list.R:88:3',
'test-injec_list.R:118:3', 'test-injec_list.R:140:3',
'test-injec_list.R:178:3', 'test-plate.R:10:3', 'test-plate.R:22:3',
'test_methodsfile.R:1:1'
• empty test (5): 'test-estimresiduals.R:1:1', 'test-estimresiduals.R:18:1',
'test-plate.R:158:1', 'test-plate_expr.R:56:1', 'test-quant_parsers.R:9:1'
• scipy not available for testing (1): 'test-pydeps.R:2:3'
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test_quant_object.R:12:1'): (code run outside of `test_that()`) ─────
Error in `.get_method_cmpds(method_id)`: Method ID 1 not found in database.
Backtrace:
▆
1. └─PKbioanalysis:::create_quant_object(quantobj, 1) at test_quant_object.R:12:1
2. └─PKbioanalysis:::update_cmpd_info(res, method_id)
3. └─PKbioanalysis:::check_quant_method_quantres(quantres, method_id)
4. └─PKbioanalysis:::.get_method_cmpds(method_id)
[ FAIL 1 | WARN 0 | SKIP 16 | PASS 103 ]
Error:
! Test failures.
Execution halted
Flavor: r-devel-linux-x86_64-fedora-gcc
Version: 0.4.0
Check: installed package size
Result: NOTE
installed size is 7.9Mb
sub-directories of 1Mb or more:
R 3.1Mb
extdata 4.5Mb
Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64