Last updated on 2025-09-11 15:49:35 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.0.5 | 23.68 | 149.32 | 173.00 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.0.5 | 17.03 | 107.18 | 124.21 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.0.5 | 293.31 | ERROR | |||
| r-devel-linux-x86_64-fedora-gcc | 1.0.5 | 286.21 | ERROR | |||
| r-devel-windows-x86_64 | 1.0.5 | 26.00 | 151.00 | 177.00 | OK | |
| r-patched-linux-x86_64 | 1.0.5 | 21.59 | 139.22 | 160.81 | OK | |
| r-release-linux-x86_64 | 1.0.5 | 19.48 | 139.24 | 158.72 | OK | |
| r-release-macos-arm64 | 1.0.5 | 102.00 | OK | |||
| r-release-macos-x86_64 | 1.0.5 | 142.00 | OK | |||
| r-release-windows-x86_64 | 1.0.5 | 26.00 | 151.00 | 177.00 | OK | |
| r-oldrel-macos-arm64 | 1.0.5 | 92.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.0.5 | 136.00 | OK | |||
| r-oldrel-windows-x86_64 | 1.0.5 | 33.00 | 203.00 | 236.00 | OK |
Version: 1.0.5
Check: tests
Result: ERROR
Running ‘testthat.R’ [19s/29s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(qad)
>
> test_check("qad")
Intervalls for the variable x2
Interval lowerBound upperBound
1 I1 1 4
2 I2 4 16
3 I3 16 36
4 I4 36 64
Probability that X2 given X1=x1 lies in the interval I_i :
I1 I2 I3 I4
x1=1 1 0 0 0
x1=3 0 1 0 0
x1=5 0 0 1 0
x1=7 0 0 0 1
Intervalls for the variable x2
Interval lowerBound upperBound
1 I1 -0.09163235 -0.02372137
2 I2 -0.02372137 0.02799197
3 I3 0.02799197 0.05886156
4 I4 0.05886156 0.10068454
5 I5 0.10068454 0.14699435
6 I6 0.14699435 0.20895072
7 I7 0.20895072 0.26269807
8 I8 0.26269807 0.32390871
9 I9 0.32390871 0.39164811
10 I10 0.39164811 0.46022719
11 I11 0.46022719 0.54145159
12 I12 0.54145159 0.59711763
13 I13 0.59711763 0.73189614
14 I14 0.73189614 0.81055537
15 I15 0.81055537 1.01329620
Probability that X2 given X1=x1 lies in the interval I_i :
I1 I2 I3 I4 I5 I6 I7 I8 I9 I10 I11 I12 I13 I14 I15
x1=0 0.2 0.14 0.42 0.22 0.02 0.00 0.00 0.00 0.0 0.00 0 0 0 0 0
x1=0.5 0.0 0.00 0.00 0.00 0.00 0.04 0.18 0.36 0.3 0.12 0 0 0 0 0
x1=-0.5 0.0 0.00 0.00 0.06 0.14 0.42 0.14 0.14 0.1 0.00 0 0 0 0 0
Intervalls for the variable x2
Interval lowerBound upperBound
1 I1 -2.19427037 -1.21525840
2 I2 -1.21525840 -0.72088062
3 I3 -0.72088062 -0.36928926
4 I4 -0.36928926 -0.09576129
5 I5 -0.09576129 0.12288373
6 I6 0.12288373 0.32501536
7 I7 0.32501536 0.54971075
8 I8 0.54971075 0.72875158
9 I9 0.72875158 1.01908632
10 I10 1.01908632 1.38341450
11 I11 1.38341450 2.32902192
Probability that X2 given X1=x1 lies in the interval I_i :
I1 I2 I3 I4 I5 I6 I7 I8 I9 I10 I11
x1=0 0.07 0 0 0.15 0.07 0 0 0.11 0.33 0.1554545 0.1145455
Intervalls for the variable x2
Interval lowerBound upperBound
1 I1 -2.61195973 -1.10832163
2 I2 -1.10832163 -0.77023262
3 I3 -0.77023262 -0.42923716
4 I4 -0.42923716 -0.06626596
5 I5 -0.06626596 0.07815227
6 I6 0.07815227 0.22931288
7 I7 0.22931288 0.37728073
8 I8 0.37728073 0.61795677
9 I9 0.61795677 0.85284383
10 I10 0.85284383 1.26854718
11 I11 1.26854718 1.81533343
Probability that X2 given X1=x1 lies in the interval I_i :
I1 I2 I3 I4 I5 I6 I7 I8 I9 I10 I11
x1=0 0.17 0.11 0.11 0.22 0 0.11 0.17 0 0 0 0.11
[1] "computation process..."
[1] "computation process: 2 / 3"
[1] "computation process: 3 / 3"
p.values are adjusted by using the method fdr
quantification of asymmetric dependencies:
Sample Size: 100
Number of unique ranks: x1: 100
x2: 100
(x1,x2): 100
Resolution: 10 x 10
Dependence measures:
q p.values
q(x1,x2) 0.3105 0.132
q(x2,x1) 0.1830 0.977
max.dependence 0.3105 0.226
a p.values
asymmetry 0.128 NA
[ FAIL 10 | WARN 26 | SKIP 0 | PASS 71 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-predict.R:42:3'): plot is returned by prediction ─────────────
class(pred[[2]]) (`actual`) not equal to c("gg", "ggplot") (`expected`).
`actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg"
`expected[2:2]`: "ggplot"
── Failure ('test-qad.R:79:3'): heatmap.qad ────────────────────────────────────
class(qad::heatmap.qad(pw_fit, select = "dependence")) (`actual`) not equal to c("gg", "ggplot") (`expected`).
`actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg"
`expected[2:2]`: "ggplot"
── Failure ('test-qad.R:80:3'): heatmap.qad ────────────────────────────────────
class(...) (`actual`) not equal to c("gg", "ggplot") (`expected`).
`actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg"
`expected[2:2]`: "ggplot"
── Failure ('test-utilityfunctions.R:24:3'): plot.qad ──────────────────────────
class(plot(fit)) (`actual`) not equal to c("gg", "ggplot") (`expected`).
`actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg"
`expected[2:2]`: "ggplot"
── Failure ('test-utilityfunctions.R:25:3'): plot.qad ──────────────────────────
class(plot(fit, addSample = TRUE)) (`actual`) not equal to c("gg", "ggplot") (`expected`).
`actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg"
`expected[2:2]`: "ggplot"
── Failure ('test-utilityfunctions.R:26:3'): plot.qad ──────────────────────────
class(plot(fit, copula = TRUE)) (`actual`) not equal to c("gg", "ggplot") (`expected`).
`actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg"
`expected[2:2]`: "ggplot"
── Failure ('test-utilityfunctions.R:27:3'): plot.qad ──────────────────────────
class(plot(fit, density = TRUE)) (`actual`) not equal to c("gg", "ggplot") (`expected`).
`actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg"
`expected[2:2]`: "ggplot"
── Failure ('test-utilityfunctions.R:28:3'): plot.qad ──────────────────────────
class(plot(fit, margins = TRUE)) (`actual`) not equal to c("gg", "ggplot") (`expected`).
`actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg"
`expected[2:2]`: "ggplot"
── Failure ('test-utilityfunctions.R:29:3'): plot.qad ──────────────────────────
class(plot(fit, panel.grid = FALSE)) (`actual`) not equal to c("gg", "ggplot") (`expected`).
`actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg"
`expected[2:2]`: "ggplot"
── Failure ('test-utilityfunctions.R:33:3'): plot_density ──────────────────────
class(plot_density(fit$mass_matrix)) (`actual`) not equal to c("gg", "ggplot") (`expected`).
`actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg"
`expected[2:2]`: "ggplot"
[ FAIL 10 | WARN 26 | SKIP 0 | PASS 71 ]
Error: Test failures
Execution halted
Flavor: r-devel-linux-x86_64-fedora-clang
Version: 1.0.5
Check: tests
Result: ERROR
Running ‘testthat.R’ [18s/24s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(qad)
>
> test_check("qad")
Intervalls for the variable x2
Interval lowerBound upperBound
1 I1 1 4
2 I2 4 16
3 I3 16 36
4 I4 36 64
Probability that X2 given X1=x1 lies in the interval I_i :
I1 I2 I3 I4
x1=1 1 0 0 0
x1=3 0 1 0 0
x1=5 0 0 1 0
x1=7 0 0 0 1
Intervalls for the variable x2
Interval lowerBound upperBound
1 I1 -0.09291133 -0.02184429
2 I2 -0.02184429 0.01654952
3 I3 0.01654952 0.04603224
4 I4 0.04603224 0.07919030
5 I5 0.07919030 0.10742619
6 I6 0.10742619 0.13817494
7 I7 0.13817494 0.17872172
8 I8 0.17872172 0.24884620
9 I9 0.24884620 0.30408865
10 I10 0.30408865 0.37163204
11 I11 0.37163204 0.45606718
12 I12 0.45606718 0.52910891
13 I13 0.52910891 0.70930691
14 I14 0.70930691 0.86710535
15 I15 0.86710535 1.04987250
Probability that X2 given X1=x1 lies in the interval I_i :
I1 I2 I3 I4 I5 I6 I7 I8 I9 I10 I11 I12 I13 I14 I15
x1=0 0.34 0.18 0.18 0.06 0.24 0 0.00 0.00 0.00 0.00 0.00 0 0 0 0
x1=0.5 0.00 0.00 0.00 0.00 0.00 0 0.06 0.24 0.30 0.24 0.16 0 0 0 0
x1=-0.5 0.00 0.00 0.00 0.02 0.06 0 0.30 0.40 0.22 0.00 0.00 0 0 0 0
Intervalls for the variable x2
Interval lowerBound upperBound
1 I1 -1.96092846 -1.23795726
2 I2 -1.23795726 -0.86502219
3 I3 -0.86502219 -0.56654027
4 I4 -0.56654027 -0.36848652
5 I5 -0.36848652 -0.05921146
6 I6 -0.05921146 0.12559851
7 I7 0.12559851 0.33442308
8 I8 0.33442308 0.59383638
9 I9 0.59383638 0.86597773
10 I10 0.86597773 1.18699642
11 I11 1.18699642 2.04323461
Probability that X2 given X1=x1 lies in the interval I_i :
I1 I2 I3 I4 I5 I6 I7 I8 I9 I10 I11
x1=0 0.11 0.11 0.07 0.11 0.05 0.11 0.11 0.11 0.09 0.02 0.11
Intervalls for the variable x2
Interval lowerBound upperBound
1 I1 -2.90523981 -1.71888415
2 I2 -1.71888415 -1.04032506
3 I3 -1.04032506 -0.78767527
4 I4 -0.78767527 -0.58775034
5 I5 -0.58775034 -0.18924882
6 I6 -0.18924882 0.03127693
7 I7 0.03127693 0.25134299
8 I8 0.25134299 0.54954792
9 I9 0.54954792 0.90177877
10 I10 0.90177877 1.22441580
11 I11 1.22441580 2.24580675
Probability that X2 given X1=x1 lies in the interval I_i :
I1 I2 I3 I4 I5 I6 I7 I8 I9 I10 I11
x1=0 0.11 0.18 0.16 0.04 0.07 0.11 0 0.11 0 0 0.22
[1] "computation process..."
[1] "computation process: 2 / 3"
[1] "computation process: 3 / 3"
p.values are adjusted by using the method fdr
quantification of asymmetric dependencies:
Sample Size: 100
Number of unique ranks: x1: 100
x2: 100
(x1,x2): 100
Resolution: 10 x 10
Dependence measures:
q p.values
q(x1,x2) 0.261 0.477
q(x2,x1) 0.273 0.380
max.dependence 0.273 0.571
a p.values
asymmetry -0.012 NA
[ FAIL 10 | WARN 26 | SKIP 0 | PASS 71 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-predict.R:42:3'): plot is returned by prediction ─────────────
class(pred[[2]]) (`actual`) not equal to c("gg", "ggplot") (`expected`).
`actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg"
`expected[2:2]`: "ggplot"
── Failure ('test-qad.R:79:3'): heatmap.qad ────────────────────────────────────
class(qad::heatmap.qad(pw_fit, select = "dependence")) (`actual`) not equal to c("gg", "ggplot") (`expected`).
`actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg"
`expected[2:2]`: "ggplot"
── Failure ('test-qad.R:80:3'): heatmap.qad ────────────────────────────────────
class(...) (`actual`) not equal to c("gg", "ggplot") (`expected`).
`actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg"
`expected[2:2]`: "ggplot"
── Failure ('test-utilityfunctions.R:24:3'): plot.qad ──────────────────────────
class(plot(fit)) (`actual`) not equal to c("gg", "ggplot") (`expected`).
`actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg"
`expected[2:2]`: "ggplot"
── Failure ('test-utilityfunctions.R:25:3'): plot.qad ──────────────────────────
class(plot(fit, addSample = TRUE)) (`actual`) not equal to c("gg", "ggplot") (`expected`).
`actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg"
`expected[2:2]`: "ggplot"
── Failure ('test-utilityfunctions.R:26:3'): plot.qad ──────────────────────────
class(plot(fit, copula = TRUE)) (`actual`) not equal to c("gg", "ggplot") (`expected`).
`actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg"
`expected[2:2]`: "ggplot"
── Failure ('test-utilityfunctions.R:27:3'): plot.qad ──────────────────────────
class(plot(fit, density = TRUE)) (`actual`) not equal to c("gg", "ggplot") (`expected`).
`actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg"
`expected[2:2]`: "ggplot"
── Failure ('test-utilityfunctions.R:28:3'): plot.qad ──────────────────────────
class(plot(fit, margins = TRUE)) (`actual`) not equal to c("gg", "ggplot") (`expected`).
`actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg"
`expected[2:2]`: "ggplot"
── Failure ('test-utilityfunctions.R:29:3'): plot.qad ──────────────────────────
class(plot(fit, panel.grid = FALSE)) (`actual`) not equal to c("gg", "ggplot") (`expected`).
`actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg"
`expected[2:2]`: "ggplot"
── Failure ('test-utilityfunctions.R:33:3'): plot_density ──────────────────────
class(plot_density(fit$mass_matrix)) (`actual`) not equal to c("gg", "ggplot") (`expected`).
`actual`: "ggplot2::ggplot" "ggplot" "ggplot2::gg" "S7_object" "gg"
`expected[2:2]`: "ggplot"
[ FAIL 10 | WARN 26 | SKIP 0 | PASS 71 ]
Error: Test failures
Execution halted
Flavor: r-devel-linux-x86_64-fedora-gcc