Last updated on 2026-06-09 21:54:43 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.1.0 | 13.67 | 129.04 | 142.71 | ERROR | |
| r-devel-linux-x86_64-debian-gcc | 0.1.0 | 9.65 | 88.01 | 97.66 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 0.1.0 | 23.00 | 220.30 | 243.30 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 0.1.0 | 23.00 | 226.13 | 249.13 | OK | |
| r-devel-windows-x86_64 | 0.1.0 | 17.00 | 176.00 | 193.00 | OK | |
| r-patched-linux-x86_64 | 0.1.0 | 14.22 | 132.76 | 146.98 | OK | |
| r-release-linux-x86_64 | 0.1.0 | 11.92 | 131.62 | 143.54 | OK | |
| r-release-macos-arm64 | 0.1.0 | 3.00 | 65.00 | 68.00 | OK | |
| r-release-macos-x86_64 | 0.1.0 | 10.00 | 173.00 | 183.00 | OK | |
| r-release-windows-x86_64 | 0.1.0 | 16.00 | 179.00 | 195.00 | OK | |
| r-oldrel-macos-arm64 | 0.1.0 | OK | ||||
| r-oldrel-macos-x86_64 | 0.1.0 | 9.00 | 148.00 | 157.00 | OK | |
| r-oldrel-windows-x86_64 | 0.1.0 | 24.00 | 224.00 | 248.00 | OK |
Version: 0.1.0
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
...
--- re-building ‘Comparing_Search_Strategies_with_searchAnalyzeR.Rmd’ using rmarkdown
Quitting from Comparing_Search_Strategies_with_searchAnalyzeR.Rmd:130-150 [execute_searches]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error:
! HTTP failure: 500
{"error":"error forwarding request /entrez/eutils/efetch.fcgi?db=pubmed&rettype=abstract&retmode=xml&id=34622311%2C38144171%2C34451950%2C34401888%2C34394785%2C34357885%2C34346564%2C34322062%2C34269175%2C34267839%2C34252108%2C34224834%2C34222708%2C34192047%2C34128356%2C34124631%2C34119350%2C34119061%2C34119060%2C34061203%2C34044900%2C33986431%2C33971907%2C33922343%2C33920109%2C33899038%2C33887457%2C33884067%2C33864035%2C33833237%2C33823185%2C33760277%2C33736921%2C33728796%2C33721558%2C33685526%2C33652582%2C33649879%2C33613024%2C33609458%2C33545094%2C33504378%2C33469205%2C33442712%2C33336213%2C33306990%2C33290571%2C33154979%2C33087460%2C33020111&email=david.winter%40gmail.com&tool=rentrez","api-key":"137.208.57.142","type":"ip",
"status":"ok"}
---
Backtrace:
▆
1. └─searchAnalyzeR::search_pubmed(...)
2. └─rentrez::entrez_fetch(...)
3. ├─base::do.call(make_entrez_query, args)
4. └─rentrez (local) `<fn>`(...)
5. └─rentrez:::entrez_check(response)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'Comparing_Search_Strategies_with_searchAnalyzeR.Rmd' failed with diagnostics:
HTTP failure: 500
{"error":"error forwarding request /entrez/eutils/efetch.fcgi?db=pubmed&rettype=abstract&retmode=xml&id=34622311%2C38144171%2C34451950%2C34401888%2C34394785%2C34357885%2C34346564%2C34322062%2C34269175%2C34267839%2C34252108%2C34224834%2C34222708%2C34192047%2C34128356%2C34124631%2C34119350%2C34119061%2C34119060%2C34061203%2C34044900%2C33986431%2C33971907%2C33922343%2C33920109%2C33899038%2C33887457%2C33884067%2C33864035%2C33833237%2C33823185%2C33760277%2C33736921%2C33728796%2C33721558%2C33685526%2C33652582%2C33649879%2C33613024%2C33609458%2C33545094%2C33504378%2C33469205%2C33442712%2C33336213%2C33306990%2C33290571%2C33154979%2C33087460%2C33020111&email=david.winter%40gmail.com&tool=rentrez","api-key":"137.208.57.142","type":"ip",
"status":"ok"}
--- failed re-building ‘Comparing_Search_Strategies_with_searchAnalyzeR.Rmd’
--- re-building ‘Real_PubMed_Search_Analysis_with_searchAnalyzeR.Rmd’ using rmarkdown
--- finished re-building ‘Real_PubMed_Search_Analysis_with_searchAnalyzeR.Rmd’
SUMMARY: processing the following file failed:
‘Comparing_Search_Strategies_with_searchAnalyzeR.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-linux-x86_64-debian-clang
Version: 0.1.0
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
...
--- re-building ‘Comparing_Search_Strategies_with_searchAnalyzeR.Rmd’ using rmarkdown
Quitting from Comparing_Search_Strategies_with_searchAnalyzeR.Rmd:130-150 [execute_searches]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error:
! HTTP failure: 500
{"error":"error forwarding request /entrez/eutils/esearch.fcgi?db=pubmed&term=%28%20%22covid-19%20clinical%20trial%22%5BTitle%2FAbstract%5D%20OR%20%22covid-19%20randomized%20controlled%20trial%22%5BTitle%2FAbstract%5D%20OR%20%22covid-19%20systematic%20review%22%5BTitle%2FAbstract%5D%20OR%20%22covid-19%20vaccine%20efficacy%22%5BTitle%2FAbstract%5D%20OR%20%22covid-19%20treatment%20outcomes%22%5BTitle%2FAbstract%5D%20%29%20AND%20%28%222020%2F01%2F01%22%5BDate%20-%20Publication%5D%20%3A%20%222024%2F12%2F31%22%5BDate%20-%20Publication%5D%29%20AND%20English%20%5BLanguage%5D&retmode=xml&usehistory=y&retmax=200&email=david.winter%40gmail.com&tool=rentrez","api-key":"137.208.57.30","type":"ip",
"status":"ok"}
---
Backtrace:
▆
1. └─searchAnalyzeR::search_pubmed(...)
2. └─rentrez::entrez_search(...)
3. └─rentrez:::make_entrez_query(...)
4. └─rentrez:::entrez_check(response)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'Comparing_Search_Strategies_with_searchAnalyzeR.Rmd' failed with diagnostics:
HTTP failure: 500
{"error":"error forwarding request /entrez/eutils/esearch.fcgi?db=pubmed&term=%28%20%22covid-19%20clinical%20trial%22%5BTitle%2FAbstract%5D%20OR%20%22covid-19%20randomized%20controlled%20trial%22%5BTitle%2FAbstract%5D%20OR%20%22covid-19%20systematic%20review%22%5BTitle%2FAbstract%5D%20OR%20%22covid-19%20vaccine%20efficacy%22%5BTitle%2FAbstract%5D%20OR%20%22covid-19%20treatment%20outcomes%22%5BTitle%2FAbstract%5D%20%29%20AND%20%28%222020%2F01%2F01%22%5BDate%20-%20Publication%5D%20%3A%20%222024%2F12%2F31%22%5BDate%20-%20Publication%5D%29%20AND%20English%20%5BLanguage%5D&retmode=xml&usehistory=y&retmax=200&email=david.winter%40gmail.com&tool=rentrez","api-key":"137.208.57.30","type":"ip",
"status":"ok"}
--- failed re-building ‘Comparing_Search_Strategies_with_searchAnalyzeR.Rmd’
--- re-building ‘Real_PubMed_Search_Analysis_with_searchAnalyzeR.Rmd’ using rmarkdown
--- finished re-building ‘Real_PubMed_Search_Analysis_with_searchAnalyzeR.Rmd’
SUMMARY: processing the following file failed:
‘Comparing_Search_Strategies_with_searchAnalyzeR.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc