Last updated on 2026-06-25 17:57:52 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.4.0 | 2.49 | 179.32 | 181.81 | OK | |
| r-devel-linux-x86_64-debian-gcc | 0.4.0 | 1.81 | 126.76 | 128.57 | OK | |
| r-devel-linux-x86_64-fedora-clang | 0.4.0 | 276.88 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 0.4.0 | 449.47 | ERROR | |||
| r-devel-windows-x86_64 | 0.4.0 | 4.00 | 226.00 | 230.00 | OK | |
| r-patched-linux-x86_64 | 0.4.0 | 2.95 | 171.77 | 174.72 | OK | |
| r-release-linux-x86_64 | 0.4.0 | 2.37 | 168.59 | 170.96 | OK | |
| r-release-macos-arm64 | 0.4.0 | 1.00 | 72.00 | 73.00 | OK | |
| r-release-macos-x86_64 | 0.4.0 | 2.00 | 364.00 | 366.00 | OK | |
| r-release-windows-x86_64 | 0.4.0 | 5.00 | 223.00 | 228.00 | OK | |
| r-oldrel-macos-arm64 | 0.4.0 | OK | ||||
| r-oldrel-macos-x86_64 | 0.4.0 | 2.00 | 337.00 | 339.00 | OK | |
| r-oldrel-windows-x86_64 | 0.4.0 | 4.00 | 281.00 | 285.00 | OK |
Version: 0.4.0
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building ‘design-principles.Rmd’ using rmarkdown
--- finished re-building ‘design-principles.Rmd’
--- re-building ‘emergence.Rmd’ using rmarkdown
--- finished re-building ‘emergence.Rmd’
--- re-building ‘epidemic_risk.Rmd’ using rmarkdown
Quitting from epidemic_risk.Rmd:41-45 [setup]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error:
! package or namespace load failed for 'ggtext' in loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]):
there is no package called 'xml2'
---
Backtrace:
▆
1. └─base::library(ggtext)
2. └─base::tryCatch(...)
3. └─base (local) tryCatchList(expr, classes, parentenv, handlers)
4. └─base (local) tryCatchOne(expr, names, parentenv, handlers[[1L]])
5. └─value[[3L]](cond)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'epidemic_risk.Rmd' failed with diagnostics:
package or namespace load failed for 'ggtext' in loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]):
there is no package called 'xml2'
--- failed re-building ‘epidemic_risk.Rmd’
--- re-building ‘estimate_individual_level_transmission.Rmd’ using rmarkdown
--- finished re-building ‘estimate_individual_level_transmission.Rmd’
--- re-building ‘heterogeneous_network_outbreaks.Rmd’ using rmarkdown
--- finished re-building ‘heterogeneous_network_outbreaks.Rmd’
--- re-building ‘proportion_transmission.Rmd’ using rmarkdown
--- finished re-building ‘proportion_transmission.Rmd’
--- re-building ‘superspreading.Rmd’ using rmarkdown
--- finished re-building ‘superspreading.Rmd’
SUMMARY: processing the following file failed:
‘epidemic_risk.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-linux-x86_64-fedora-gcc