CRAN Package Check Results for Package viraldomain

Last updated on 2025-05-17 07:50:37 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.0.6 1.98 31.46 33.44 ERROR
r-devel-linux-x86_64-debian-gcc 0.0.6 1.54 23.87 25.41 ERROR
r-devel-linux-x86_64-fedora-clang 0.0.6 54.92 ERROR
r-devel-linux-x86_64-fedora-gcc 0.0.6 53.10 ERROR
r-devel-windows-x86_64 0.0.6 4.00 51.00 55.00 NOTE
r-patched-linux-x86_64 0.0.6 2.14 29.09 31.23 NOTE
r-release-linux-x86_64 0.0.6 1.90 29.70 31.60 NOTE
r-release-macos-arm64 0.0.6 21.00 NOTE
r-release-macos-x86_64 0.0.6 34.00 NOTE
r-release-windows-x86_64 0.0.6 4.00 51.00 55.00 NOTE
r-oldrel-macos-arm64 0.0.6 21.00 OK
r-oldrel-macos-x86_64 0.0.6 33.00 OK
r-oldrel-windows-x86_64 0.0.6 4.00 56.00 60.00 OK

Additional issues

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Check Details

Version: 0.0.6
Check: DESCRIPTION meta-information
Result: NOTE Missing dependency on R >= 4.1.0 because package code uses the pipe |> or function shorthand \(...) syntax added in R 4.1.0. File(s) using such syntax: ‘knn_domain_score.R’ ‘knn_domain_score.Rd’ ‘mars_domain_score.R’ ‘mars_domain_score.Rd’ ‘nn_domain_score.R’ ‘nn_domain_score.Rd’ ‘normalized_domain_plot.R’ ‘normalized_domain_plot.Rd’ ‘rf_domain_score.R’ ‘simple_domain_plot.R’ ‘simple_domain_plot.Rd’ Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-windows-x86_64

Version: 0.0.6
Check: tests
Result: ERROR Running ‘testthat.R’ [7s/9s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview > # * https://testthat.r-lib.org/articles/special-files.html > > library(testthat) > library(viraldomain) > > test_check("viraldomain") Attaching package: 'dplyr' The following object is masked from 'package:testthat': matches The following objects are masked from 'package:stats': filter, lag The following objects are masked from 'package:base': intersect, setdiff, setequal, union [ FAIL 1 | WARN 0 | SKIP 5 | PASS 0 ] ══ Skipped tests (5) ═══════════════════════════════════════════════════════════ • On CRAN (5): 'test-mars_domain_score.R:11:3', 'test-nn_domain_score.R:11:3', 'test-normalized_domain_plot.R:11:3', 'test-rf_domain_score.R:11:3', 'test-simple_domain_plot.R:11:3' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-knn_domain_score.R:11:3'): `knn_domain_score()` works ────────── Error in `fit_xy(spec, x = mold$predictors, y = mold$outcomes, case_weights = case_weights, control = control_parsnip)`: Please install the kknn package to use this engine. Backtrace: ▆ 1. ├─base::print(...) 2. └─viraldomain::knn_domain_score(...) 3. ├─dplyr::bind_cols(...) 4. │ └─rlang::list2(...) 5. ├─stats::predict(...) 6. ├─parsnip::fit(...) 7. └─workflows:::fit.workflow(...) 8. └─workflows::.fit_model(workflow, control) 9. ├─generics::fit(action_model, workflow = workflow, control = control) 10. └─workflows:::fit.action_model(...) 11. └─workflows:::fit_from_xy(spec, mold, case_weights, control_parsnip) 12. ├─generics::fit_xy(...) 13. └─parsnip::fit_xy.model_spec(...) 14. └─parsnip:::check_installs(object) 15. └─cli::cli_abort(...) 16. └─rlang::abort(...) [ FAIL 1 | WARN 0 | SKIP 5 | PASS 0 ] Error: Test failures Execution halted Flavor: r-devel-linux-x86_64-debian-clang

Version: 0.0.6
Check: tests
Result: ERROR Running ‘testthat.R’ [5s/6s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview > # * https://testthat.r-lib.org/articles/special-files.html > > library(testthat) > library(viraldomain) > > test_check("viraldomain") Attaching package: 'dplyr' The following object is masked from 'package:testthat': matches The following objects are masked from 'package:stats': filter, lag The following objects are masked from 'package:base': intersect, setdiff, setequal, union [ FAIL 1 | WARN 0 | SKIP 5 | PASS 0 ] ══ Skipped tests (5) ═══════════════════════════════════════════════════════════ • On CRAN (5): 'test-mars_domain_score.R:11:3', 'test-nn_domain_score.R:11:3', 'test-normalized_domain_plot.R:11:3', 'test-rf_domain_score.R:11:3', 'test-simple_domain_plot.R:11:3' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-knn_domain_score.R:11:3'): `knn_domain_score()` works ────────── Error in `fit_xy(spec, x = mold$predictors, y = mold$outcomes, case_weights = case_weights, control = control_parsnip)`: Please install the kknn package to use this engine. Backtrace: ▆ 1. ├─base::print(...) 2. └─viraldomain::knn_domain_score(...) 3. ├─dplyr::bind_cols(...) 4. │ └─rlang::list2(...) 5. ├─stats::predict(...) 6. ├─parsnip::fit(...) 7. └─workflows:::fit.workflow(...) 8. └─workflows::.fit_model(workflow, control) 9. ├─generics::fit(action_model, workflow = workflow, control = control) 10. └─workflows:::fit.action_model(...) 11. └─workflows:::fit_from_xy(spec, mold, case_weights, control_parsnip) 12. ├─generics::fit_xy(...) 13. └─parsnip::fit_xy.model_spec(...) 14. └─parsnip:::check_installs(object) 15. └─cli::cli_abort(...) 16. └─rlang::abort(...) [ FAIL 1 | WARN 0 | SKIP 5 | PASS 0 ] Error: Test failures Execution halted Flavor: r-devel-linux-x86_64-debian-gcc

Version: 0.0.6
Check: tests
Result: ERROR Running ‘testthat.R’ [12s/32s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview > # * https://testthat.r-lib.org/articles/special-files.html > > library(testthat) > library(viraldomain) > > test_check("viraldomain") Attaching package: 'dplyr' The following object is masked from 'package:testthat': matches The following objects are masked from 'package:stats': filter, lag The following objects are masked from 'package:base': intersect, setdiff, setequal, union [ FAIL 1 | WARN 0 | SKIP 5 | PASS 0 ] ══ Skipped tests (5) ═══════════════════════════════════════════════════════════ • On CRAN (5): 'test-mars_domain_score.R:11:3', 'test-nn_domain_score.R:11:3', 'test-normalized_domain_plot.R:11:3', 'test-rf_domain_score.R:11:3', 'test-simple_domain_plot.R:11:3' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-knn_domain_score.R:11:3'): `knn_domain_score()` works ────────── Error in `fit_xy(spec, x = mold$predictors, y = mold$outcomes, case_weights = case_weights, control = control_parsnip)`: Please install the kknn package to use this engine. Backtrace: ▆ 1. ├─base::print(...) 2. └─viraldomain::knn_domain_score(...) 3. ├─dplyr::bind_cols(...) 4. │ └─rlang::list2(...) 5. ├─stats::predict(...) 6. ├─parsnip::fit(...) 7. └─workflows:::fit.workflow(...) 8. └─workflows::.fit_model(workflow, control) 9. ├─generics::fit(action_model, workflow = workflow, control = control) 10. └─workflows:::fit.action_model(...) 11. └─workflows:::fit_from_xy(spec, mold, case_weights, control_parsnip) 12. ├─generics::fit_xy(...) 13. └─parsnip::fit_xy.model_spec(...) 14. └─parsnip:::check_installs(object) 15. └─cli::cli_abort(...) 16. └─rlang::abort(...) [ FAIL 1 | WARN 0 | SKIP 5 | PASS 0 ] Error: Test failures Execution halted Flavor: r-devel-linux-x86_64-fedora-clang

Version: 0.0.6
Check: tests
Result: ERROR Running ‘testthat.R’ [12s/28s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview > # * https://testthat.r-lib.org/articles/special-files.html > > library(testthat) > library(viraldomain) > > test_check("viraldomain") Attaching package: 'dplyr' The following object is masked from 'package:testthat': matches The following objects are masked from 'package:stats': filter, lag The following objects are masked from 'package:base': intersect, setdiff, setequal, union [ FAIL 1 | WARN 0 | SKIP 5 | PASS 0 ] ══ Skipped tests (5) ═══════════════════════════════════════════════════════════ • On CRAN (5): 'test-mars_domain_score.R:11:3', 'test-nn_domain_score.R:11:3', 'test-normalized_domain_plot.R:11:3', 'test-rf_domain_score.R:11:3', 'test-simple_domain_plot.R:11:3' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-knn_domain_score.R:11:3'): `knn_domain_score()` works ────────── Error in `fit_xy(spec, x = mold$predictors, y = mold$outcomes, case_weights = case_weights, control = control_parsnip)`: Please install the kknn package to use this engine. Backtrace: ▆ 1. ├─base::print(...) 2. └─viraldomain::knn_domain_score(...) 3. ├─dplyr::bind_cols(...) 4. │ └─rlang::list2(...) 5. ├─stats::predict(...) 6. ├─parsnip::fit(...) 7. └─workflows:::fit.workflow(...) 8. └─workflows::.fit_model(workflow, control) 9. ├─generics::fit(action_model, workflow = workflow, control = control) 10. └─workflows:::fit.action_model(...) 11. └─workflows:::fit_from_xy(spec, mold, case_weights, control_parsnip) 12. ├─generics::fit_xy(...) 13. └─parsnip::fit_xy.model_spec(...) 14. └─parsnip:::check_installs(object) 15. └─cli::cli_abort(...) 16. └─rlang::abort(...) [ FAIL 1 | WARN 0 | SKIP 5 | PASS 0 ] Error: Test failures Execution halted Flavor: r-devel-linux-x86_64-fedora-gcc

Version: 0.0.6
Check: DESCRIPTION meta-information
Result: NOTE Missing dependency on R >= 4.1.0 because package code uses the pipe |> or function shorthand \(...) syntax added in R 4.1.0. File(s) using such syntax: ‘knn_domain_score.R’ ‘mars_domain_score.R’ ‘nn_domain_score.R’ ‘normalized_domain_plot.R’ ‘rf_domain_score.R’ ‘simple_domain_plot.R’ Flavor: r-release-macos-x86_64