Provides a C++ backend for multivariate phylogenetic comparative
models implemented in the R-package 'PCMBase'. Can be used in combination
with 'PCMBase' to enable fast and parallel likelihood calculation. Implements
the pruning likelihood calculation algorithm described in Mitov et al. (2018)
<doi:10.48550/arXiv.1809.09014>. Uses the 'SPLITT' C++ library for parallel tree traversal
described in Mitov and Stadler (2018) <doi:10.1111/2041-210X.13136>.
| Version: |
0.1.9 |
| Depends: |
R (≥ 3.1.0), Rcpp, methods |
| Imports: |
PCMBase, data.table, abind |
| LinkingTo: |
Rcpp, RcppArmadillo |
| Suggests: |
testthat, knitr, rmarkdown, covr |
| Published: |
2020-03-23 |
| DOI: |
10.32614/CRAN.package.PCMBaseCpp |
| Author: |
Venelin Mitov [aut, cre, cph] (<a
href="https://venelin.github.io">venelin.github.io</a>) |
| Maintainer: |
Venelin Mitov <vmitov at gmail.com> |
| BugReports: |
https://github.com/venelin/PCMBaseCpp/issues |
| License: |
GPL (≥ 3.0) |
| URL: |
https://github.com/venelin/PCMBaseCpp, https://venelin.github.io |
| NeedsCompilation: |
yes |
| Citation: |
PCMBaseCpp citation info |
| Materials: |
README NEWS |
| CRAN checks: |
PCMBaseCpp results [issues need fixing before 2025-05-13] |