abba 0.2.0

Breaking changes

This release removes implicit file writes to the user’s filespace in order to comply with CRAN policy. Several functions now require arguments that previously defaulted to a location derived from other inputs. Update call sites to pass these arguments explicitly.

create_batch_api() and create_batch_job()

• path is now required. The previous default of "." (the working directory) has been removed.
• Before: create_batch_api() wrote plumber.R to getwd().
• After: callers must supply an explicit path, e.g. create_batch_api("path/to/api_directory").
• Also fixes a bug where a path containing . (for example "~/api_directory/plumber.R") was silently rewritten to "./plumber.R". The user-supplied path is now respected.

abba_slurm_submit_job(), abba_rslauncher_submit_job_local(), abba_rslauncher_submit_logrx_job_local()

• log_path is now required. There is no longer a default that writes the log next to the submitted program.
• Before: omitting log_path caused the log to be written to dirname(program_path).
• After: callers must pass log_path explicitly, e.g. abba_slurm_submit_job("/path/to/script.R", log_path = "/path/to/logs").
• When using abba_submit_batch() with a Workbench or SLURM submit function, pass log_path through the ... arguments, e.g. abba_submit_batch(progs, submit_func = abba_rslauncher_submit_job_local, log_path = "/path/to/logs").

abba_submit_batch() and abba_submit_batch_and_get_results()

• cache_folder is now required whenever update_cache = TRUE or rerun_unchanged_programs = FALSE. The previous fallback that wrote a .abba_cache directory next to each program has been removed.
• Before: caching silently wrote to dirname(program_path)/.abba_cache.
• After: callers must supply cache_folder explicitly or set it via the abba.default_cache_folder option. A clear error is raised if caching is requested without a cache_folder.
• When update_cache = FALSE and rerun_unchanged_programs = TRUE (the defaults), no cache writes occur and no cache_folder is required.

Internal

• Cache helper functions (cache_match(), abba_save_file_cache()) now require cache_folder and error clearly when it is missing. This also stops an existing code path from writing a cache into the program’s directory when the top-level call did not request caching.

Documentation

• Package Title and Description now quote external software names ('Kubernetes', 'SLURM', 'Posit Workbench') per CRAN conventions.
• Examples and vignettes updated to show explicit paths for create_batch_*, log_path, and cache_folder rather than defaults.
• The standalone LICENSE file has been removed; License in DESCRIPTION is now Apache License (>= 2) without the file LICENSE pointer, which is the correct form when there are no additional restrictions.

abba 0.1.0

• Initial CRAN release
• Support for Kubernetes job submission and monitoring via kubectl
• Support for SLURM job submission and monitoring via sbatch/scontrol/sacct
• Support for Posit Workbench job submission via RSLauncher
• Batch execution with parallel and sequential modes
• File-based caching to skip unchanged programs in batch reruns
• logrx integration for detailed execution logging
• Plumber API template for secure identity segregation on Posit Connect