Last updated on 2025-09-20 00:50:33 CEST.
| Package | ERROR | WARN | OK |
|---|---|---|---|
| smartsnp | 1 | 1 | 11 |
Current CRAN status: ERROR: 1, WARN: 1, OK: 11
Version: 1.2.0
Check: whether package can be installed
Result: WARN
Found the following significant warnings:
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/RcppArmadillo/version/arma.h:71:17: warning: Using fallback compilation with Armadillo 14.6.3. Please consider defining -DARMA_USE_CURRENT. See GitHub issue #475 for more. [-W#pragma-messages]
See ‘/home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/smartsnp.Rcheck/00install.out’ for details.
* used C++ compiler: ‘Debian clang version 19.1.7 (3+b2)’
Flavor: r-devel-linux-x86_64-debian-clang
Version: 1.2.0
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building 'Converting_VCF_and_PLINK_formats.Rmd' using rmarkdown
File figure/data_transformation_example_plot-1.png not found in resource path
Error: processing vignette 'Converting_VCF_and_PLINK_formats.Rmd' failed with diagnostics:
pandoc document conversion failed with error 99
--- failed re-building 'Converting_VCF_and_PLINK_formats.Rmd'
--- re-building 'aDNA_smartpca_analysis.Rmd' using rmarkdown
File figure/lazaridis_plot-1.png not found in resource path
Error: processing vignette 'aDNA_smartpca_analysis.Rmd' failed with diagnostics:
pandoc document conversion failed with error 99
--- failed re-building 'aDNA_smartpca_analysis.Rmd'
--- re-building 'mallard_smartpca_analysis.Rmd' using rmarkdown
File figure/pca_plot_mallard-1.png not found in resource path
Error: processing vignette 'mallard_smartpca_analysis.Rmd' failed with diagnostics:
pandoc document conversion failed with error 99
--- failed re-building 'mallard_smartpca_analysis.Rmd'
SUMMARY: processing the following files failed:
'Converting_VCF_and_PLINK_formats.Rmd' 'aDNA_smartpca_analysis.Rmd'
'mallard_smartpca_analysis.Rmd'
Error: Vignette re-building failed.
Execution halted
Flavor: r-oldrel-windows-x86_64